RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 JPH1Q9HDC5 661 aaPredicted RBP10.31□□□□□ -0.76
TRIM39-206ENST00000420746 ZBTB40Q9NUA8 1239 aa10.31□□□□□ -0.76
TRIM39-206ENST00000420746 DACT1Q9NYF0 836 aa10.31□□□□□ -0.76
TRIM39-206ENST00000420746 SLC9A2Q9UBY0 812 aa10.31□□□□□ -0.76
TRIM39-206ENST00000420746 CDH7Q9ULB5 785 aa10.31□□□□□ -0.76
TRIM39-206ENST00000420746 IGSF10Q6WRI0 2623 aa10.31□□□□□ -0.76
TRIM39-206ENST00000420746 FREM2Q5SZK8 3169 aa10.3□□□□□ -0.76
TRIM39-206ENST00000420746 KLRF2D3W0D1 207 aa10.3□□□□□ -0.76
TRIM39-206ENST00000420746 TEX28O15482 410 aa10.3□□□□□ -0.76
TRIM39-206ENST00000420746 HRO43593 1189 aa10.3□□□□□ -0.76
TRIM39-206ENST00000420746 SMARCA5O60264 1052 aaPredicted RBP10.3□□□□□ -0.76
TRIM39-206ENST00000420746 PAPSS2O95340 614 aaPredicted RBP10.3□□□□□ -0.76
TRIM39-206ENST00000420746 URODP06132 367 aa10.3□□□□□ -0.76
TRIM39-206ENST00000420746 ITGB5P18084 799 aa10.3□□□□□ -0.76
TRIM39-206ENST00000420746 CD72P21854 359 aa10.3□□□□□ -0.76
TRIM39-206ENST00000420746 FOXC1Q12948 553 aa10.3□□□□□ -0.76
TRIM39-206ENST00000420746 MTMR1Q13613 665 aa10.3□□□□□ -0.76
TRIM39-206ENST00000420746 ZNF484Q5JVG2 852 aa10.3□□□□□ -0.76
TRIM39-206ENST00000420746 TSHZ3Q63HK5 1081 aa10.3□□□□□ -0.76
TRIM39-206ENST00000420746 TBC1D10CQ8IV04 446 aa10.3□□□□□ -0.76
TRIM39-206ENST00000420746 ZNF687Q8N1G0 1237 aa10.3□□□□□ -0.76
TRIM39-206ENST00000420746 STAG2Q8N3U4 1231 aa10.3□□□□□ -0.76
TRIM39-206ENST00000420746 RNF169Q8NCN4 708 aa10.3□□□□□ -0.76
TRIM39-206ENST00000420746 ZSCAN10Q96SZ4 725 aaPredicted RBP10.3□□□□□ -0.76
TRIM39-206ENST00000420746 TRAIPQ9BWF2 469 aa10.3□□□□□ -0.76
TRIM39-206ENST00000420746 RIOX1Q9H6W3 641 aa10.3□□□□□ -0.76
TRIM39-206ENST00000420746 RXFP1Q9HBX9 757 aa10.3□□□□□ -0.76
TRIM39-206ENST00000420746 HELLSQ9NRZ9 838 aa10.3□□□□□ -0.76
TRIM39-206ENST00000420746 TBC1D13Q9NVG8 400 aa10.3□□□□□ -0.76
TRIM39-206ENST00000420746 COL4A3Q01955 1670 aa10.3□□□□□ -0.76
TRIM39-206ENST00000420746 NEDD4P46934 1319 aa10.3□□□□□ -0.76
TRIM39-206ENST00000420746 AKAP13Q12802 2813 aa10.29□□□□□ -0.76
TRIM39-206ENST00000420746 PNMA6FA0A0J9YX94 578 aa10.29□□□□□ -0.76
TRIM39-206ENST00000420746 MAN2B1O00754 1011 aa10.29□□□□□ -0.76
TRIM39-206ENST00000420746 SOD2P04179 222 aa10.29□□□□□ -0.76
TRIM39-206ENST00000420746 EIF4BP23588 611 aaKnown RBP10.29□□□□□ -0.76
TRIM39-206ENST00000420746 FSHRP23945 695 aa10.29□□□□□ -0.76
TRIM39-206ENST00000420746 SLC11A1P49279 550 aa10.29□□□□□ -0.76
TRIM39-206ENST00000420746 NOVA1P51513 510 aaKnown RBP10.29□□□□□ -0.76
TRIM39-206ENST00000420746 ZNF252P-AS1Q0IIN9 211 aa10.29□□□□□ -0.76
TRIM39-206ENST00000420746 SF3A2Q15428 464 aaKnown RBP10.29□□□□□ -0.76
TRIM39-206ENST00000420746 GLB1LQ6UWU2 654 aa10.29□□□□□ -0.76
TRIM39-206ENST00000420746 LONP2Q86WA8 852 aa10.29□□□□□ -0.76
TRIM39-206ENST00000420746 HOMER1Q86YM7 354 aa10.29□□□□□ -0.76
TRIM39-206ENST00000420746 GPR65Q8IYL9 337 aa10.29□□□□□ -0.76
TRIM39-206ENST00000420746 FAM160A2Q8N612 972 aaPredicted RBP10.29□□□□□ -0.76
TRIM39-206ENST00000420746 ENAHQ8N8S7 591 aaPredicted RBP10.29□□□□□ -0.76
TRIM39-206ENST00000420746 CUL5Q93034 780 aa10.29□□□□□ -0.76
TRIM39-206ENST00000420746 PHF20Q9BVI0 1012 aa10.29□□□□□ -0.76
TRIM39-206ENST00000420746 MAD2L2Q9UI95 211 aa10.29□□□□□ -0.76
TRIM39-206ENST00000420746 NEUROG3Q9Y4Z2 214 aa10.29□□□□□ -0.76
TRIM39-206ENST00000420746 UBIAD1Q9Y5Z9 338 aa10.29□□□□□ -0.76
TRIM39-206ENST00000420746 NFASCO94856 1347 aa10.29□□□□□ -0.76
TRIM39-206ENST00000420746 MYH15Q9Y2K3 1946 aa10.29□□□□□ -0.76
TRIM39-206ENST00000420746 LAMA1P25391 3075 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 NAV2Q8IVL1 2488 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 IGKV6D-21A0A0A0MT36 114 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 PALM3A6NDB9 673 aaPredicted RBP10.28□□□□□ -0.76
TRIM39-206ENST00000420746 SHISA7A6NL88 538 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 ATG7O95352 703 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 C22orf31O95567 290 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 SKIP12755 728 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 CXCL12P48061 93 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 ACTR2P61160 394 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 HAND2P61296 217 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 NOMO2Q5JPE7 1267 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 TICAM2Q86XR7 235 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 SMARCC2Q8TAQ2 1214 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 PI4K2BQ8TCG2 481 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 PANK1Q8TE04 598 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 DNASE1L2Q92874 299 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 PIGSQ96S52 555 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 TMEM175Q9BSA9 504 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 HERC2P3Q9BVR0 1158 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 SCNM1Q9BWG6 230 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 CHMP4BQ9H444 224 aaKnown RBP10.28□□□□□ -0.76
TRIM39-206ENST00000420746 JADE2Q9NQC1 790 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 CHST12Q9NRB3 414 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 CACNA2D2Q9NY47 1150 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 DDX19BQ9UMR2 479 aa10.28□□□□□ -0.76
TRIM39-206ENST00000420746 LAMA5O15230 3695 aa10.27□□□□□ -0.76
TRIM39-206ENST00000420746 GREB1Q4ZG55 1949 aa10.27□□□□□ -0.76
TRIM39-206ENST00000420746 ZBTB42B2RXF5 422 aa10.27□□□□□ -0.77
TRIM39-206ENST00000420746 MEIS2O14770 477 aa10.27□□□□□ -0.77
TRIM39-206ENST00000420746 EPN2O95208 641 aa10.27□□□□□ -0.77
TRIM39-206ENST00000420746 SSBP05455 408 aaKnown RBP eCLIP10.27□□□□□ -0.77
TRIM39-206ENST00000420746 MS4A1P11836 297 aa10.27□□□□□ -0.77
TRIM39-206ENST00000420746 HOXA6P31267 233 aa10.27□□□□□ -0.77
TRIM39-206ENST00000420746 PHKA2P46019 1235 aa10.27□□□□□ -0.77
TRIM39-206ENST00000420746 AK2P54819 239 aa10.27□□□□□ -0.77
TRIM39-206ENST00000420746 RNASELQ05823 741 aaKnown RBP10.27□□□□□ -0.77
TRIM39-206ENST00000420746 PLA2G2CQ5R387 149 aa10.27□□□□□ -0.77
TRIM39-206ENST00000420746 PDZD3Q86UT5 571 aa10.27□□□□□ -0.77
TRIM39-206ENST00000420746 RNF168Q8IYW5 571 aaPredicted RBP10.27□□□□□ -0.77
TRIM39-206ENST00000420746 FGF13Q92913 245 aa10.27□□□□□ -0.77
TRIM39-206ENST00000420746 PPP1R16BQ96T49 567 aa10.27□□□□□ -0.77
TRIM39-206ENST00000420746 ADAMTS10Q9H324 1103 aa10.27□□□□□ -0.77
TRIM39-206ENST00000420746 DNAJB4Q9UDY4 337 aa10.27□□□□□ -0.77
TRIM39-206ENST00000420746 GPSM3Q9Y4H4 160 aa10.27□□□□□ -0.77
TRIM39-206ENST00000420746 PCDHGA5Q9Y5G8 931 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms