RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 SMC3Q9UQE7 1217 aa18.32■□□□□ 0.52
LINC00404-201ENST00000418660 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.32■□□□□ 0.52
LINC00404-201ENST00000418660 PCDHB6Q9Y5E3 794 aa18.32■□□□□ 0.52
LINC00404-201ENST00000418660 H3BQV1 296 aa18.31■□□□□ 0.52
LINC00404-201ENST00000418660 TNFRSF10AO00220 468 aa18.31■□□□□ 0.52
LINC00404-201ENST00000418660 LAD1O00515 517 aa18.31■□□□□ 0.52
LINC00404-201ENST00000418660 USO1O60763 962 aaKnown RBP18.31■□□□□ 0.52
LINC00404-201ENST00000418660 HOXA11P31270 313 aaPredicted RBP18.31■□□□□ 0.52
LINC00404-201ENST00000418660 HYAL1Q12794 435 aa18.31■□□□□ 0.52
LINC00404-201ENST00000418660 HAUS3Q68CZ6 603 aa18.31■□□□□ 0.52
LINC00404-201ENST00000418660 IFNLR1Q8IU57 520 aaPredicted RBP18.31■□□□□ 0.52
LINC00404-201ENST00000418660 THNSL1Q8IYQ7 743 aa18.31■□□□□ 0.52
LINC00404-201ENST00000418660 HELQQ8TDG4 1101 aa18.31■□□□□ 0.52
LINC00404-201ENST00000418660 ASAP3Q8TDY4 903 aa18.31■□□□□ 0.52
LINC00404-201ENST00000418660 MRPL9Q9BYD2 267 aaKnown RBP18.31■□□□□ 0.52
LINC00404-201ENST00000418660 LRWD1Q9UFC0 647 aa18.31■□□□□ 0.52
LINC00404-201ENST00000418660 STK24Q9Y6E0 443 aa18.31■□□□□ 0.52
LINC00404-201ENST00000418660 CUL9Q8IWT3 2517 aa18.31■□□□□ 0.52
LINC00404-201ENST00000418660 REV3LO60673 3130 aa18.31■□□□□ 0.52
LINC00404-201ENST00000418660 CSPG5O95196 566 aa18.3■□□□□ 0.52
LINC00404-201ENST00000418660 GLRA2P23416 452 aa18.3■□□□□ 0.52
LINC00404-201ENST00000418660 IRS1P35568 1242 aa18.3■□□□□ 0.52
LINC00404-201ENST00000418660 PLCB3Q01970 1234 aa18.3■□□□□ 0.52
LINC00404-201ENST00000418660 CAPSQ13938 189 aa18.3■□□□□ 0.52
LINC00404-201ENST00000418660 CTC1Q2NKJ3 1217 aa18.3■□□□□ 0.52
LINC00404-201ENST00000418660 RILPL1Q5EBL4 403 aa18.3■□□□□ 0.52
LINC00404-201ENST00000418660 POTEGQ6S5H5 508 aa18.3■□□□□ 0.52
LINC00404-201ENST00000418660 KCNT2Q6UVM3 1135 aa18.3■□□□□ 0.52
LINC00404-201ENST00000418660 IGSF22Q8N9C0 903 aa18.3■□□□□ 0.52
LINC00404-201ENST00000418660 MCPH1Q8NEM0 835 aa18.3■□□□□ 0.52
LINC00404-201ENST00000418660 PPP2R3CQ969Q6 453 aa18.3■□□□□ 0.52
LINC00404-201ENST00000418660 PGBD4Q96DM1 585 aa18.3■□□□□ 0.52
LINC00404-201ENST00000418660 ZNF558Q96NG5 402 aa18.3■□□□□ 0.52
LINC00404-201ENST00000418660 NFKBIZQ9BYH8 718 aa18.3■□□□□ 0.52
LINC00404-201ENST00000418660 BACH2Q9BYV9 841 aa18.3■□□□□ 0.52
LINC00404-201ENST00000418660 RAB34Q9BZG1 259 aa18.3■□□□□ 0.52
LINC00404-201ENST00000418660 POLR3FQ9H1D9 316 aaPredicted RBP18.3■□□□□ 0.52
LINC00404-201ENST00000418660 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.3■□□□□ 0.52
LINC00404-201ENST00000418660 LZTS1Q9Y250 596 aa18.3■□□□□ 0.52
LINC00404-201ENST00000418660 PCDHB2Q9Y5E7 798 aa18.3■□□□□ 0.52
LINC00404-201ENST00000418660 ERLIN2O94905 339 aa18.29■□□□□ 0.52
LINC00404-201ENST00000418660 AXLP30530 894 aa18.29■□□□□ 0.52
LINC00404-201ENST00000418660 CCT6AP40227 531 aaKnown RBP18.29■□□□□ 0.52
LINC00404-201ENST00000418660 PRPHP41219 470 aa18.29■□□□□ 0.52
LINC00404-201ENST00000418660 NCBP1Q09161 790 aaKnown RBP18.29■□□□□ 0.52
LINC00404-201ENST00000418660 UBXN11Q5T124 520 aa18.29■□□□□ 0.52
LINC00404-201ENST00000418660 GLB1LQ6UWU2 654 aa18.29■□□□□ 0.52
LINC00404-201ENST00000418660 MRPL10Q7Z7H8 261 aaKnown RBP18.29■□□□□ 0.52
LINC00404-201ENST00000418660 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.29■□□□□ 0.52
LINC00404-201ENST00000418660 LPPQ93052 612 aa18.29■□□□□ 0.52
LINC00404-201ENST00000418660 NECAB3Q96P71 396 aaPredicted RBP18.29■□□□□ 0.52
LINC00404-201ENST00000418660 CLDND1Q9NY35 253 aa18.29■□□□□ 0.52
LINC00404-201ENST00000418660 PUF60Q9UHX1 559 aaKnown RBP18.29■□□□□ 0.52
LINC00404-201ENST00000418660 VCANP13611 3396 aa18.28■□□□□ 0.52
LINC00404-201ENST00000418660 ARHGEF35A5YM69 484 aa18.28■□□□□ 0.52
LINC00404-201ENST00000418660 INO80B-WBP1J3KQ70 363 aa18.28■□□□□ 0.52
LINC00404-201ENST00000418660 TSPAN1O60635 241 aa18.28■□□□□ 0.52
LINC00404-201ENST00000418660 OFD1O75665 1012 aa18.28■□□□□ 0.52
LINC00404-201ENST00000418660 PPM1AP35813 382 aa18.28■□□□□ 0.52
LINC00404-201ENST00000418660 MBTD1Q05BQ5 628 aa18.28■□□□□ 0.52
LINC00404-201ENST00000418660 ECM1Q16610 540 aa18.28■□□□□ 0.52
LINC00404-201ENST00000418660 PUS10Q3MIT2 529 aaKnown RBP18.28■□□□□ 0.52
LINC00404-201ENST00000418660 LONRF3Q496Y0 759 aa18.28■□□□□ 0.52
LINC00404-201ENST00000418660 LARP1BQ659C4 914 aaKnown RBP18.28■□□□□ 0.52
LINC00404-201ENST00000418660 PDE12Q6L8Q7 609 aaKnown RBP18.28■□□□□ 0.52
LINC00404-201ENST00000418660 PADI6Q6TGC4 694 aa18.28■□□□□ 0.52
LINC00404-201ENST00000418660 EP400NLQ6ZTU2 488 aa18.28■□□□□ 0.52
LINC00404-201ENST00000418660 MAEAQ7L5Y9 396 aa18.28■□□□□ 0.52
LINC00404-201ENST00000418660 MICAL1Q8TDZ2 1067 aa18.28■□□□□ 0.52
LINC00404-201ENST00000418660 MRPS27Q92552 414 aaKnown RBP18.28■□□□□ 0.52
LINC00404-201ENST00000418660 IGFLR1Q9H665 355 aa18.28■□□□□ 0.52
LINC00404-201ENST00000418660 GPRC5CQ9NQ84 441 aa18.28■□□□□ 0.52
LINC00404-201ENST00000418660 TLR9Q9NR96 1032 aa18.28■□□□□ 0.52
LINC00404-201ENST00000418660 SPG21Q9NZD8 308 aa18.28■□□□□ 0.52
LINC00404-201ENST00000418660 ATG2AQ2TAZ0 1938 aa18.27■□□□□ 0.52
LINC00404-201ENST00000418660 PLXNA4Q9HCM2 1894 aa18.27■□□□□ 0.52
LINC00404-201ENST00000418660 MEIS3P2A8K0S8 358 aa18.27■□□□□ 0.52
LINC00404-201ENST00000418660 H3BQ06 376 aaPredicted RBP18.27■□□□□ 0.52
LINC00404-201ENST00000418660 CYP11B2P19099 503 aa18.27■□□□□ 0.52
LINC00404-201ENST00000418660 GTF2F1P35269 517 aaKnown RBP eCLIP18.27■□□□□ 0.52
LINC00404-201ENST00000418660 LTBRP36941 435 aa18.27■□□□□ 0.52
LINC00404-201ENST00000418660 ERVFC1P60507 584 aa18.27■□□□□ 0.52
LINC00404-201ENST00000418660 KRT17Q04695 432 aa18.27■□□□□ 0.52
LINC00404-201ENST00000418660 CUL4AQ13619 759 aa18.27■□□□□ 0.52
LINC00404-201ENST00000418660 NOMO2Q5JPE7 1267 aa18.27■□□□□ 0.52
LINC00404-201ENST00000418660 DTHD1Q6ZMT9 781 aa18.27■□□□□ 0.52
LINC00404-201ENST00000418660 AGMOQ6ZNB7 445 aa18.27■□□□□ 0.52
LINC00404-201ENST00000418660 ADGRD2Q7Z7M1 963 aa18.27■□□□□ 0.52
LINC00404-201ENST00000418660 CNNM3Q8NE01 707 aa18.27■□□□□ 0.52
LINC00404-201ENST00000418660 CCDC51Q96ER9 411 aa18.27■□□□□ 0.52
LINC00404-201ENST00000418660 KIAA1024Q9UPX6 916 aa18.27■□□□□ 0.52
LINC00404-201ENST00000418660 CARNS1A5YM72 827 aa18.26■□□□□ 0.51
LINC00404-201ENST00000418660 GRXCR2A6NFK2 248 aa18.26■□□□□ 0.51
LINC00404-201ENST00000418660 FSCN2O14926 492 aa18.26■□□□□ 0.51
LINC00404-201ENST00000418660 NCLP19338 710 aaKnown RBP18.26■□□□□ 0.51
LINC00404-201ENST00000418660 PBX3P40426 434 aa18.26■□□□□ 0.51
LINC00404-201ENST00000418660 ALDH7A1P49419 539 aaKnown RBP18.26■□□□□ 0.51
LINC00404-201ENST00000418660 BCAR1P56945 870 aa18.26■□□□□ 0.51
LINC00404-201ENST00000418660 ADAM15Q13444 863 aa18.26■□□□□ 0.51
LINC00404-201ENST00000418660 IL17AQ16552 155 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms