RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 RPAP1Q9BWH6 1393 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-205ENST00000418258 A8MXQ7 604 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 NDUFA10O95299 355 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 ASMTLO95671 621 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 ESRRAP11474 423 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-205ENST00000418258 COPB2P35606 906 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 EFHC2Q5JST6 749 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 LINC00301Q8NCQ3 95 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 SLC26A7Q8TE54 656 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 CDV3Q9UKY7 258 aaKnown RBP11.94□□□□□ -0.5
PTCH1-205ENST00000418258 AATKQ6ZMQ8 1374 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 COPEO14579 308 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 PRRG1O14668 218 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 IKBKBO14920 756 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 NMT2O60551 498 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 FGGP02679 453 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 PSMC1P62191 440 aaKnown RBP11.94□□□□□ -0.5
PTCH1-205ENST00000418258 HEATR6Q6AI08 1181 aaKnown RBP11.94□□□□□ -0.5
PTCH1-205ENST00000418258 SMAP1Q8IYB5 467 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-205ENST00000418258 PLEKHF1Q96S99 279 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 SYF2O95926 243 aaKnown RBP11.94□□□□□ -0.5
PTCH1-205ENST00000418258 EEF1DP29692 281 aaKnown RBP11.94□□□□□ -0.5
PTCH1-205ENST00000418258 SDC4P31431 198 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 LIFRP42702 1097 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 RAPGEF5Q92565 580 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 CPVLQ9H3G5 476 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 PCSK1NQ9UHG2 260 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 ADAMTS1Q9UHI8 967 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 SYNGAP1Q96PV0 1343 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 SPHKAPQ2M3C7 1700 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 KRT37O76014 449 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 RPSAP08865 295 aaKnown RBP11.94□□□□□ -0.5
PTCH1-205ENST00000418258 TMPRSS15P98073 1019 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 OR6P1Q8NGX9 317 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 OTULINQ96BN8 352 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 RBAKQ9NYW8 714 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-205ENST00000418258 CPDO75976 1380 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 TRAPPC3O43617 180 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 STAT3P40763 770 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 ARL4CP56559 192 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 ST8SIA6P61647 398 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 WASHC5Q12768 1159 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 ALKBH5Q6P6C2 394 aaKnown RBP11.94□□□□□ -0.5
PTCH1-205ENST00000418258 ACAD11Q709F0 780 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 UNC13DQ70J99 1090 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 ABHD8Q96I13 439 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 TMEM47Q9BQJ4 181 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 SENP1Q9P0U3 644 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 MROH7-TTC4A0A0A0MT08 1334 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 SERPIND1P05546 499 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 MTMR2Q13614 643 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 ZNF235Q14590 738 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 C6orf118Q5T5N4 469 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 C11orf57Q6ZUT1 292 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-205ENST00000418258 MB21D1Q8N884 522 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 LXNQ9BS40 222 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 CNOT10Q9H9A5 744 aaKnown RBP11.93□□□□□ -0.5
PTCH1-205ENST00000418258 PCDHB8Q9UN66 801 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 TTC37Q6PGP7 1564 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 ASB14A6NK59 587 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 PODXLO00592 558 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 RNF14Q9UBS8 474 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 MAP3K4Q9Y6R4 1608 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 SFR1Q86XK3 245 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 TTC13Q8NBP0 860 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 SLC44A5Q8NCS7 719 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 NUP85Q9BW27 656 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 EIF2AQ9BY44 585 aaKnown RBP11.93□□□□□ -0.5
PTCH1-205ENST00000418258 VPS11Q9H270 941 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 CASS4Q9NQ75 786 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 CAPN11Q9UMQ6 739 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 TRIM33Q9UPN9 1127 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 POTEFA5A3E0 1075 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 SYCE1LA8MT33 242 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 MYO1DO94832 1006 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 POTEIP0CG38 1075 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 FAM117BQ6P1L5 589 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 POTEGQ6S5H5 508 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 POTEEQ6S8J3 1075 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 DGKHQ86XP1 1220 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 NEK9Q8TD19 979 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 FBXO41Q8TF61 875 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 SAAL1Q96ER3 474 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 SPON1Q9HCB6 807 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 MAPK13O15264 365 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 GPC5P78333 572 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 HDLBPQ00341 1268 aaKnown RBP11.93□□□□□ -0.5
PTCH1-205ENST00000418258 DUOXA2Q1HG44 320 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 KCNV1Q6PIU1 500 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 EFHBQ8N7U6 833 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 JPH1Q9HDC5 661 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-205ENST00000418258 LCMT1Q9UIC8 334 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 LAMC1P11047 1609 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 ARHGAP10A1A4S6 786 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 ADRA2BP18089 450 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 GCKP35557 465 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 GTF2H3Q13889 308 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 ZC3H12BQ5HYM0 836 aaKnown RBP11.93□□□□□ -0.5
PTCH1-205ENST00000418258 FAM102AQ5T9C2 384 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-205ENST00000418258 WDR48Q8TAF3 677 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms