RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 DACT1Q9NYF0 836 aa16.87■□□□□ 0.29
UBXN4-203ENST00000416538 DENND4AQ7Z401 1863 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 FAM86C2PA6NEL3 165 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 DKC1O60832 514 aaKnown RBP eCLIP16.86■□□□□ 0.29
UBXN4-203ENST00000416538 BAG4O95429 457 aaKnown RBP16.86■□□□□ 0.29
UBXN4-203ENST00000416538 EOMESO95936 686 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 PRR29P0C7W0 189 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 SPATA31C1P0DKV0 1188 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 ATP2B1P20020 1258 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 HOXA11P31270 313 aaPredicted RBP16.86■□□□□ 0.29
UBXN4-203ENST00000416538 MCM7P33993 719 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 NDUFV1P49821 464 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 AFF1P51825 1210 aaKnown RBP16.86■□□□□ 0.29
UBXN4-203ENST00000416538 PLCB3Q01970 1234 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 SMAD4Q13485 552 aaKnown RBP16.86■□□□□ 0.29
UBXN4-203ENST00000416538 TRIM29Q14134 588 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 SMAD2Q15796 467 aaKnown RBP16.86■□□□□ 0.29
UBXN4-203ENST00000416538 PLPP4Q5VZY2 271 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 ABI1Q8IZP0 508 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 ASAP3Q8TDY4 903 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 PSPC1Q8WXF1 523 aaKnown RBP16.86■□□□□ 0.29
UBXN4-203ENST00000416538 MRPS27Q92552 414 aaKnown RBP16.86■□□□□ 0.29
UBXN4-203ENST00000416538 C8orf76Q96K31 380 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 ZNF558Q96NG5 402 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 JPH2Q9BR39 696 aaPredicted RBP16.86■□□□□ 0.29
UBXN4-203ENST00000416538 CHST12Q9NRB3 414 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 AAASQ9NRG9 546 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 CD207Q9UJ71 328 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 PCDHA12Q9UN75 941 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 PPME1Q9Y570 386 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 PLXNA3P51805 1871 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 TRIP11Q15643 1979 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 C2orf16Q68DN1 1984 aa16.86■□□□□ 0.29
UBXN4-203ENST00000416538 TECTAO75443 2155 aa16.85■□□□□ 0.29
UBXN4-203ENST00000416538 C19orf67A6NJJ6 358 aa16.85■□□□□ 0.29
UBXN4-203ENST00000416538 HIDE1A8MVS5 230 aa16.85■□□□□ 0.29
UBXN4-203ENST00000416538 NT5C1B-RDH14C9J2C7 533 aa16.85■□□□□ 0.29
UBXN4-203ENST00000416538 NCK2O43639 380 aa16.85■□□□□ 0.29
UBXN4-203ENST00000416538 SRGAP2CP0DJJ0 459 aa16.85■□□□□ 0.29
UBXN4-203ENST00000416538 COL9A1P20849 921 aa16.85■□□□□ 0.29
UBXN4-203ENST00000416538 CDC42EP1Q00587 391 aa16.85■□□□□ 0.29
UBXN4-203ENST00000416538 KCNC3Q14003 757 aa16.85■□□□□ 0.29
UBXN4-203ENST00000416538 NBR1Q14596 966 aa16.85■□□□□ 0.29
UBXN4-203ENST00000416538 DUSP6Q16828 381 aa16.85■□□□□ 0.29
UBXN4-203ENST00000416538 PUS10Q3MIT2 529 aaKnown RBP16.85■□□□□ 0.29
UBXN4-203ENST00000416538 AGMOQ6ZNB7 445 aa16.85■□□□□ 0.29
UBXN4-203ENST00000416538 RNF149Q8NC42 400 aa16.85■□□□□ 0.29
UBXN4-203ENST00000416538 SMRP1Q8NCR6 262 aa16.85■□□□□ 0.29
UBXN4-203ENST00000416538 PIGOQ8TEQ8 1089 aa16.85■□□□□ 0.29
UBXN4-203ENST00000416538 MTRQ99707 1265 aa16.85■□□□□ 0.29
UBXN4-203ENST00000416538 LLPHQ9BRT6 129 aaKnown RBP16.85■□□□□ 0.29
UBXN4-203ENST00000416538 TBC1D13Q9NVG8 400 aa16.85■□□□□ 0.29
UBXN4-203ENST00000416538 LZTS1Q9Y250 596 aa16.85■□□□□ 0.29
UBXN4-203ENST00000416538 EIF5BO60841 1220 aaKnown RBP16.84■□□□□ 0.29
UBXN4-203ENST00000416538 ZNF623O75123 536 aa16.84■□□□□ 0.29
UBXN4-203ENST00000416538 MED24O75448 989 aa16.84■□□□□ 0.29
UBXN4-203ENST00000416538 CD2BP2O95400 341 aaKnown RBP16.84■□□□□ 0.29
UBXN4-203ENST00000416538 EYA4O95677 639 aa16.84■□□□□ 0.29
UBXN4-203ENST00000416538 SSTR3P32745 418 aaPredicted RBP16.84■□□□□ 0.29
UBXN4-203ENST00000416538 RBM25P49756 843 aaKnown RBP16.84■□□□□ 0.29
UBXN4-203ENST00000416538 RARRES1P49788 294 aa16.84■□□□□ 0.29
UBXN4-203ENST00000416538 CAPSQ13938 189 aa16.84■□□□□ 0.29
UBXN4-203ENST00000416538 CSPP1Q1MSJ5 1256 aa16.84■□□□□ 0.29
UBXN4-203ENST00000416538 SRGAP1Q7Z6B7 1085 aa16.84■□□□□ 0.29
UBXN4-203ENST00000416538 FBXO18Q8NFZ0 1043 aa16.84■□□□□ 0.29
UBXN4-203ENST00000416538 TCF25Q9BQ70 676 aa16.84■□□□□ 0.29
UBXN4-203ENST00000416538 VN1R3Q9BXE9 311 aa16.84■□□□□ 0.29
UBXN4-203ENST00000416538 INO80BQ9C086 356 aaPredicted RBP16.84■□□□□ 0.29
UBXN4-203ENST00000416538 TLE6Q9H808 572 aa16.84■□□□□ 0.29
UBXN4-203ENST00000416538 DNAJB4Q9UDY4 337 aa16.84■□□□□ 0.29
UBXN4-203ENST00000416538 INPP5FQ9Y2H2 1132 aa16.84■□□□□ 0.29
UBXN4-203ENST00000416538 PCDHB2Q9Y5E7 798 aa16.84■□□□□ 0.29
UBXN4-203ENST00000416538 ZNF318Q5VUA4 2279 aa16.84■□□□□ 0.29
UBXN4-203ENST00000416538 PI4K2BG5E9Z4 385 aa16.83■□□□□ 0.28
UBXN4-203ENST00000416538 GAS2O43903 313 aaKnown RBP16.83■□□□□ 0.28
UBXN4-203ENST00000416538 TSPAN1O60635 241 aa16.83■□□□□ 0.28
UBXN4-203ENST00000416538 OFD1O75665 1012 aa16.83■□□□□ 0.28
UBXN4-203ENST00000416538 GLRA2P23416 452 aa16.83■□□□□ 0.28
UBXN4-203ENST00000416538 BCAR1P56945 870 aa16.83■□□□□ 0.28
UBXN4-203ENST00000416538 PTENP60484 403 aa16.83■□□□□ 0.28
UBXN4-203ENST00000416538 COASYQ13057 564 aa16.83■□□□□ 0.28
UBXN4-203ENST00000416538 ZNF174Q15697 407 aa16.83■□□□□ 0.28
UBXN4-203ENST00000416538 AMHR2Q16671 573 aa16.83■□□□□ 0.28
UBXN4-203ENST00000416538 OTUD6AQ7L8S5 288 aa16.83■□□□□ 0.28
UBXN4-203ENST00000416538 ADHFE1Q8IWW8 467 aa16.83■□□□□ 0.28
UBXN4-203ENST00000416538 MICAL1Q8TDZ2 1067 aa16.83■□□□□ 0.28
UBXN4-203ENST00000416538 TCP11Q8WWU5 503 aa16.83■□□□□ 0.28
UBXN4-203ENST00000416538 PPP2R3CQ969Q6 453 aa16.83■□□□□ 0.28
UBXN4-203ENST00000416538 LRFN3Q9BTN0 628 aa16.83■□□□□ 0.28
UBXN4-203ENST00000416538 EIF2AQ9BY44 585 aaKnown RBP16.83■□□□□ 0.28
UBXN4-203ENST00000416538 MRPL9Q9BYD2 267 aaKnown RBP16.83■□□□□ 0.28
UBXN4-203ENST00000416538 NRDE2Q9H7Z3 1164 aa16.83■□□□□ 0.28
UBXN4-203ENST00000416538 GPRC5CQ9NQ84 441 aa16.83■□□□□ 0.28
UBXN4-203ENST00000416538 ENTPD7Q9NQZ7 604 aa16.83■□□□□ 0.28
UBXN4-203ENST00000416538 ANKEF1Q9NU02 776 aa16.83■□□□□ 0.28
UBXN4-203ENST00000416538 SPG21Q9NZD8 308 aa16.83■□□□□ 0.28
UBXN4-203ENST00000416538 MYH11P35749 1972 aa16.82■□□□□ 0.28
UBXN4-203ENST00000416538 USO1O60763 962 aaKnown RBP16.82■□□□□ 0.28
UBXN4-203ENST00000416538 ZC3H11AO75152 810 aaKnown RBP eCLIP16.82■□□□□ 0.28
UBXN4-203ENST00000416538 PPM1AP35813 382 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms