RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 EFNA5P52803 228 aa16.27■□□□□ 0.2
CHD1-202ENST00000414220 GRB10Q13322 594 aa16.27■□□□□ 0.2
CHD1-202ENST00000414220 SPOUT1Q5T280 376 aaKnown RBP16.27■□□□□ 0.2
CHD1-202ENST00000414220 NOTUMQ6P988 496 aa16.27■□□□□ 0.2
CHD1-202ENST00000414220 ECHDC2Q86YB7 292 aa16.27■□□□□ 0.2
CHD1-202ENST00000414220 RNF169Q8NCN4 708 aa16.27■□□□□ 0.2
CHD1-202ENST00000414220 FBXO22Q8NEZ5 403 aa16.27■□□□□ 0.2
CHD1-202ENST00000414220 ZNF689Q96CS4 500 aaPredicted RBP16.27■□□□□ 0.2
CHD1-202ENST00000414220 PRIMPOLQ96LW4 560 aa16.27■□□□□ 0.2
CHD1-202ENST00000414220 PLIN2Q99541 437 aa16.27■□□□□ 0.2
CHD1-202ENST00000414220 TRIM6Q9C030 488 aaPredicted RBP16.27■□□□□ 0.2
CHD1-202ENST00000414220 CSRNP2Q9H175 543 aa16.27■□□□□ 0.2
CHD1-202ENST00000414220 C17orf75Q9HAS0 396 aa16.27■□□□□ 0.2
CHD1-202ENST00000414220 GPRC5CQ9NQ84 441 aa16.27■□□□□ 0.2
CHD1-202ENST00000414220 MTUS1Q9ULD2 1270 aa16.27■□□□□ 0.2
CHD1-202ENST00000414220 TBKBP1A7MCY6 615 aa16.26■□□□□ 0.19
CHD1-202ENST00000414220 PPP6R2O75170 966 aa16.26■□□□□ 0.19
CHD1-202ENST00000414220 KRT18P05783 430 aaKnown RBP16.26■□□□□ 0.19
CHD1-202ENST00000414220 SMTNP53814 917 aa16.26■□□□□ 0.19
CHD1-202ENST00000414220 DMP1Q13316 513 aaPredicted RBP16.26■□□□□ 0.19
CHD1-202ENST00000414220 MAPK6Q16659 721 aa16.26■□□□□ 0.19
CHD1-202ENST00000414220 TMEM119Q4V9L6 283 aa16.26■□□□□ 0.19
CHD1-202ENST00000414220 RINT1Q6NUQ1 792 aa16.26■□□□□ 0.19
CHD1-202ENST00000414220 TMEM192Q8IY95 271 aa16.26■□□□□ 0.19
CHD1-202ENST00000414220 PNMA5Q96PV4 448 aa16.26■□□□□ 0.19
CHD1-202ENST00000414220 MRPL9Q9BYD2 267 aaKnown RBP16.26■□□□□ 0.19
CHD1-202ENST00000414220 TMEM117Q9H0C3 514 aa16.26■□□□□ 0.19
CHD1-202ENST00000414220 FAM105AQ9NUU6 356 aa16.26■□□□□ 0.19
CHD1-202ENST00000414220 TFIP11Q9UBB9 837 aaKnown RBP16.26■□□□□ 0.19
CHD1-202ENST00000414220 FBXO2Q9UK22 296 aaPredicted RBP16.26■□□□□ 0.19
CHD1-202ENST00000414220 LAMA3Q16787 3333 aa16.25■□□□□ 0.19
CHD1-202ENST00000414220 SIP14410 1827 aa16.25■□□□□ 0.19
CHD1-202ENST00000414220 CARNS1A5YM72 827 aa16.25■□□□□ 0.19
CHD1-202ENST00000414220 CCDC169A6NNP5 214 aa16.25■□□□□ 0.19
CHD1-202ENST00000414220 ZNF623O75123 536 aa16.25■□□□□ 0.19
CHD1-202ENST00000414220 GUCY2CP25092 1073 aa16.25■□□□□ 0.19
CHD1-202ENST00000414220 CTNNB1P35222 781 aa16.25■□□□□ 0.19
CHD1-202ENST00000414220 KARSQ15046 597 aaKnown RBP16.25■□□□□ 0.19
CHD1-202ENST00000414220 PTPROQ16827 1216 aa16.25■□□□□ 0.19
CHD1-202ENST00000414220 PAN2Q504Q3 1202 aaKnown RBP16.25■□□□□ 0.19
CHD1-202ENST00000414220 RRAGBQ5VZM2 374 aa16.25■□□□□ 0.19
CHD1-202ENST00000414220 CCDC73Q6ZRK6 1079 aa16.25■□□□□ 0.19
CHD1-202ENST00000414220 APBB1IPQ7Z5R6 666 aaPredicted RBP16.25■□□□□ 0.19
CHD1-202ENST00000414220 CRIPAKQ8N1N5 446 aa16.25■□□□□ 0.19
CHD1-202ENST00000414220 LINC00301Q8NCQ3 95 aa16.25■□□□□ 0.19
CHD1-202ENST00000414220 KCNG4Q8TDN1 519 aa16.25■□□□□ 0.19
CHD1-202ENST00000414220 C11orf84Q9BUA3 381 aaPredicted RBP16.25■□□□□ 0.19
CHD1-202ENST00000414220 PLVAPQ9BX97 442 aa16.25■□□□□ 0.19
CHD1-202ENST00000414220 UBN1Q9NPG3 1134 aa16.25■□□□□ 0.19
CHD1-202ENST00000414220 LMCD1Q9NZU5 365 aa16.25■□□□□ 0.19
CHD1-202ENST00000414220 STK17AQ9UEE5 414 aa16.25■□□□□ 0.19
CHD1-202ENST00000414220 RBM19Q9Y4C8 960 aaKnown RBP16.25■□□□□ 0.19
CHD1-202ENST00000414220 PCDHB12Q9Y5F1 795 aa16.25■□□□□ 0.19
CHD1-202ENST00000414220 H0YCG3 227 aa16.24■□□□□ 0.19
CHD1-202ENST00000414220 HIP1RO75146 1068 aa16.24■□□□□ 0.19
CHD1-202ENST00000414220 DDIT3P35638 169 aa16.24■□□□□ 0.19
CHD1-202ENST00000414220 BMPR1AP36894 532 aa16.24■□□□□ 0.19
CHD1-202ENST00000414220 MBTD1Q05BQ5 628 aa16.24■□□□□ 0.19
CHD1-202ENST00000414220 CSPP1Q1MSJ5 1256 aa16.24■□□□□ 0.19
CHD1-202ENST00000414220 FOXD4L6Q3SYB3 417 aaPredicted RBP16.24■□□□□ 0.19
CHD1-202ENST00000414220 EPC2Q52LR7 807 aa16.24■□□□□ 0.19
CHD1-202ENST00000414220 NAALADL2Q58DX5 795 aa16.24■□□□□ 0.19
CHD1-202ENST00000414220 CDCA2Q69YH5 1023 aaPredicted RBP16.24■□□□□ 0.19
CHD1-202ENST00000414220 GLB1LQ6UWU2 654 aa16.24■□□□□ 0.19
CHD1-202ENST00000414220 FOXD4L3Q6VB84 417 aaPredicted RBP16.24■□□□□ 0.19
CHD1-202ENST00000414220 C1orf186Q6ZWK4 172 aa16.24■□□□□ 0.19
CHD1-202ENST00000414220 SYMPKQ92797 1274 aaKnown RBP16.24■□□□□ 0.19
CHD1-202ENST00000414220 ADPGKQ9BRR6 497 aa16.24■□□□□ 0.19
CHD1-202ENST00000414220 C17orf80Q9BSJ5 609 aa16.24■□□□□ 0.19
CHD1-202ENST00000414220 MINDY3Q9H8M7 445 aa16.24■□□□□ 0.19
CHD1-202ENST00000414220 RC3H2Q9HBD1 1191 aaKnown RBP16.24■□□□□ 0.19
CHD1-202ENST00000414220 KMT5AQ9NQR1 393 aa16.24■□□□□ 0.19
CHD1-202ENST00000414220 LARSQ9P2J5 1176 aaKnown RBP16.24■□□□□ 0.19
CHD1-202ENST00000414220 PCDHB2Q9Y5E7 798 aa16.24■□□□□ 0.19
CHD1-202ENST00000414220 TTC3P53804 2025 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 K7ERI5 159 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 TSPAN1O60635 241 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 CUTAO60888 179 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 LIG1P18858 919 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 PLCG1P19174 1290 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 POU3F3P20264 500 aaPredicted RBP16.23■□□□□ 0.19
CHD1-202ENST00000414220 SCP2P22307 547 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 SLC12A3P55017 1021 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 PEX3P56589 373 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 GRIN1Q05586 938 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 GPM6BQ13491 265 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 PRPF4BQ13523 1007 aaKnown RBP16.23■□□□□ 0.19
CHD1-202ENST00000414220 DHX8Q14562 1220 aaKnown RBP16.23■□□□□ 0.19
CHD1-202ENST00000414220 FAM187BQ17R55 369 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 SPECC1Q5M775 1068 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 PPP4R3CPQ6ZMV5 832 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 KCNK18Q7Z418 384 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 LRRC43Q8N309 656 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 MAFAQ8NHW3 353 aaPredicted RBP16.23■□□□□ 0.19
CHD1-202ENST00000414220 URGCPQ8TCY9 931 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 LARP4BQ92615 738 aaKnown RBP16.23■□□□□ 0.19
CHD1-202ENST00000414220 RAD54LQ92698 747 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 CLP1Q92989 425 aaKnown RBP16.23■□□□□ 0.19
CHD1-202ENST00000414220 EPSTI1Q96J88 318 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 CLIC6Q96NY7 704 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms