RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 SH3GL3Q99963 347 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 ADPGKQ9BRR6 497 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 CRACR2AQ9BSW2 395 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 ISCA1Q9BUE6 129 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 VCX3BQ9H321 246 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 AASDHPPTQ9NRN7 309 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 TOPORSQ9NS56 1045 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-203ENST00000414174 HPF1Q9NWY4 346 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 CEP72Q9P209 647 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 STK39Q9UEW8 545 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 SSX2IPQ9Y2D8 614 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 RRP7AQ9Y3A4 280 aaKnown RBP4.04□□□□□ -1.76
SF3B1-203ENST00000414174 PCDHB5Q9Y5E4 795 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 CD2APQ9Y5K6 639 aa4.04□□□□□ -1.76
SF3B1-203ENST00000414174 DHX29Q7Z478 1369 aaKnown RBP4.03□□□□□ -1.76
SF3B1-203ENST00000414174 A0A087X0B3 334 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 TSPY2A6NKD2 308 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 CCDC85CA6NKD9 419 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 A8MVJ9 347 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 PRR33A8MZF0 331 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 ETV2O00321 342 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-203ENST00000414174 IGF2BP3O00425 579 aaKnown RBP eCLIP4.03□□□□□ -1.76
SF3B1-203ENST00000414174 NDC80O14777 642 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 FANCGO15287 622 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 TLR5O60602 858 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 DKC1O60832 514 aaKnown RBP eCLIP4.03□□□□□ -1.76
SF3B1-203ENST00000414174 DAB1O75553 588 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 SNX4O95219 450 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 GUCA1CO95843 209 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 TSPY3P0CV98 308 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 TSPY8P0CW00 308 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 EEF2P13639 858 aaKnown RBP4.03□□□□□ -1.76
SF3B1-203ENST00000414174 HSD17B2P37059 387 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 MAPK9P45984 424 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 CENPAP49450 140 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 RPS6KA3P51812 740 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 LINC00310P59036 64 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 KRTAP10-2P60368 255 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 TSPY1Q01534 308 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 ICA1Q05084 483 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 IFRD2Q12894 506 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-203ENST00000414174 SEPT6Q14141 434 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 GBX1Q14549 363 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 PPP1R7Q15435 360 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 INAQ16352 499 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 KRT71Q3SY84 523 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 ANKDD1AQ495B1 522 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 WIPI1Q5MNZ9 446 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-203ENST00000414174 SH2D4BQ5SQS7 431 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 GPATCH4Q5T3I0 446 aaKnown RBP4.03□□□□□ -1.76
SF3B1-203ENST00000414174 SCARA3Q6AZY7 606 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 TTBK2Q6IQ55 1244 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 XRRA1Q6P2D8 792 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 ANGPTL8Q6UXH0 198 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 C4orf50Q6ZRC1 276 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 SEPT14Q6ZU15 432 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 SV2BQ7L1I2 683 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 NECAB2Q7Z6G3 386 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 RNF180Q86T96 592 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 TMEM110Q86TL2 294 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 RSPH3Q86UC2 560 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 SLC9B2Q86UD5 537 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 GALNT13Q8IUC8 556 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 NRSN1Q8IZ57 195 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 AFAP1L2Q8N4X5 818 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 THAP3Q8WTV1 239 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-203ENST00000414174 POF1BQ8WVV4 589 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 SGCDQ92629 289 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 HPS3Q969F9 1004 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 GCC1Q96CN9 775 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 NRBF2Q96F24 287 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 DDX11Q96FC9 970 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 EPSTI1Q96J88 318 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 MRPL46Q9H2W6 279 aaKnown RBP4.03□□□□□ -1.76
SF3B1-203ENST00000414174 TMPRSS5Q9H3S3 457 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 ZCCHC4Q9H5U6 513 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 VCPKMTQ9H867 229 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 DCP1AQ9NPI6 582 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-203ENST00000414174 CD93Q9NPY3 652 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 PFDN2Q9UHV9 154 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 GRID1Q9ULK0 1009 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 STRIP2Q9ULQ0 834 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 CYP8B1Q9UNU6 501 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 DMTF1Q9Y222 760 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 CNPY2Q9Y2B0 182 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 ATP11BQ9Y2G3 1177 aa4.03□□□□□ -1.76
SF3B1-203ENST00000414174 V9GYY5 206 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-203ENST00000414174 NINLQ9Y2I6 1382 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 GAKO14976 1311 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 A0A0G2JLL6 359 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-203ENST00000414174 PRAMEF27A3QJZ7 478 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 F5H423 210 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-203ENST00000414174 H0Y626 953 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 GFRA2O00451 464 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 FRS3O43559 492 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 PALMO75781 387 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 USP1O94782 785 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 TGDSO95455 350 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 YEATS4O95619 227 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 ASMTLO95671 621 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms