RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 MUM1Q2TAK8 710 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 INTS11Q5TA45 600 aaKnown RBP10.22□□□□□ -0.77
SNHG3-201ENST00000413987 NUGGCQ68CJ6 796 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 LHFPL2Q6ZUX7 228 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 ANKRD20A12PQ8NF67 263 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 NEK9Q8TD19 979 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 BAP1Q92560 729 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 ESR2Q92731 530 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 TMEM39BQ9GZU3 492 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 RNF41Q9H4P4 317 aaPredicted RBP10.22□□□□□ -0.77
SNHG3-201ENST00000413987 IL17RBQ9NRM6 502 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 PPARGC1AQ9UBK2 798 aaKnown RBP10.22□□□□□ -0.77
SNHG3-201ENST00000413987 CNOT7Q9UIV1 285 aaKnown RBP10.22□□□□□ -0.77
SNHG3-201ENST00000413987 ZNF112Q9UJU3 913 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 FBXL5Q9UKA1 691 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 HCN4Q9Y3Q4 1203 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 MYO3BQ8WXR4 1341 aa10.21□□□□□ -0.77
SNHG3-201ENST00000413987 SERTM1A2A2V5 107 aa10.21□□□□□ -0.77
SNHG3-201ENST00000413987 SGTAO43765 313 aa10.21□□□□□ -0.77
SNHG3-201ENST00000413987 CTDNEP1O95476 244 aa10.21□□□□□ -0.77
SNHG3-201ENST00000413987 MAP2K2P36507 400 aa10.21□□□□□ -0.77
SNHG3-201ENST00000413987 PDE4BQ07343 736 aa10.21□□□□□ -0.77
SNHG3-201ENST00000413987 MINDY4Q4G0A6 757 aa10.21□□□□□ -0.77
SNHG3-201ENST00000413987 FOXR1Q6PIV2 292 aa10.21□□□□□ -0.77
SNHG3-201ENST00000413987 TRAF7Q6Q0C0 670 aa10.21□□□□□ -0.77
SNHG3-201ENST00000413987 DLK2Q6UY11 383 aa10.21□□□□□ -0.77
SNHG3-201ENST00000413987 BRAPQ7Z569 592 aa10.21□□□□□ -0.77
SNHG3-201ENST00000413987 CARNMT1Q8N4J0 409 aa10.21□□□□□ -0.77
SNHG3-201ENST00000413987 AGBL3Q8NEM8 1001 aa10.21□□□□□ -0.77
SNHG3-201ENST00000413987 MOGAT1Q96PD6 335 aa10.21□□□□□ -0.77
SNHG3-201ENST00000413987 UBAC1Q9BSL1 405 aa10.21□□□□□ -0.77
SNHG3-201ENST00000413987 NAA15Q9BXJ9 866 aaKnown RBP10.21□□□□□ -0.77
SNHG3-201ENST00000413987 ABCB6Q9NP58 842 aa10.21□□□□□ -0.77
SNHG3-201ENST00000413987 NKIRAS2Q9NYR9 191 aa10.21□□□□□ -0.77
SNHG3-201ENST00000413987 ZNF70Q9UC06 446 aaPredicted RBP10.21□□□□□ -0.77
SNHG3-201ENST00000413987 BLOC1S6Q9UL45 172 aa10.21□□□□□ -0.77
SNHG3-201ENST00000413987 MYH15Q9Y2K3 1946 aa10.21□□□□□ -0.78
SNHG3-201ENST00000413987 SIPA1L1O43166 1804 aa10.21□□□□□ -0.78
SNHG3-201ENST00000413987 BIN1O00499 593 aa10.21□□□□□ -0.78
SNHG3-201ENST00000413987 ATP1A3P13637 1013 aa10.21□□□□□ -0.78
SNHG3-201ENST00000413987 GARTP22102 1010 aa10.21□□□□□ -0.78
SNHG3-201ENST00000413987 EPS15P42566 896 aa10.21□□□□□ -0.78
SNHG3-201ENST00000413987 RCAN1P53805 252 aa10.21□□□□□ -0.78
SNHG3-201ENST00000413987 GUCA2AQ02747 115 aa10.21□□□□□ -0.78
SNHG3-201ENST00000413987 MOGSQ13724 837 aa10.21□□□□□ -0.78
SNHG3-201ENST00000413987 GALEQ14376 348 aa10.21□□□□□ -0.78
SNHG3-201ENST00000413987 GBX1Q14549 363 aa10.21□□□□□ -0.78
SNHG3-201ENST00000413987 TNIP1Q15025 636 aa10.21□□□□□ -0.78
SNHG3-201ENST00000413987 PRAMEF18Q5VWM3 479 aa10.21□□□□□ -0.78
SNHG3-201ENST00000413987 APOA5Q6Q788 366 aa10.21□□□□□ -0.78
SNHG3-201ENST00000413987 EP400NLQ6ZTU2 488 aa10.21□□□□□ -0.78
SNHG3-201ENST00000413987 SH3RF1Q7Z6J0 888 aa10.21□□□□□ -0.78
SNHG3-201ENST00000413987 SDCCAG8Q86SQ7 713 aaPredicted RBP10.21□□□□□ -0.78
SNHG3-201ENST00000413987 GSDMBQ8TAX9 411 aa10.21□□□□□ -0.78
SNHG3-201ENST00000413987 ZNF274Q96GC6 653 aaPredicted RBP10.21□□□□□ -0.78
SNHG3-201ENST00000413987 ZSCAN10Q96SZ4 725 aaPredicted RBP10.21□□□□□ -0.78
SNHG3-201ENST00000413987 HSD3B7Q9H2F3 369 aa10.21□□□□□ -0.78
SNHG3-201ENST00000413987 CEP72Q9P209 647 aa10.21□□□□□ -0.78
SNHG3-201ENST00000413987 PDP2Q9P2J9 529 aa10.21□□□□□ -0.78
SNHG3-201ENST00000413987 ROBO3Q96MS0 1386 aa10.2□□□□□ -0.78
SNHG3-201ENST00000413987 ERLIN2O94905 339 aa10.2□□□□□ -0.78
SNHG3-201ENST00000413987 PYGLP06737 847 aa10.2□□□□□ -0.78
SNHG3-201ENST00000413987 DESP17661 470 aa10.2□□□□□ -0.78
SNHG3-201ENST00000413987 AARSP49588 968 aaKnown RBP eCLIP10.2□□□□□ -0.78
SNHG3-201ENST00000413987 WTAPQ15007 396 aa10.2□□□□□ -0.78
SNHG3-201ENST00000413987 SEC23AQ15436 765 aa10.2□□□□□ -0.78
SNHG3-201ENST00000413987 WHAMMP3Q1A5X7 153 aa10.2□□□□□ -0.78
SNHG3-201ENST00000413987 SPECC1LQ69YQ0 1117 aa10.2□□□□□ -0.78
SNHG3-201ENST00000413987 SPATC1Q76KD6 591 aa10.2□□□□□ -0.78
SNHG3-201ENST00000413987 POTEDQ86YR6 584 aa10.2□□□□□ -0.78
SNHG3-201ENST00000413987 SPDYE1Q8NFV5 336 aaPredicted RBP10.2□□□□□ -0.78
SNHG3-201ENST00000413987 DPF2Q92785 391 aa10.2□□□□□ -0.78
SNHG3-201ENST00000413987 GJB4Q9NTQ9 266 aa10.2□□□□□ -0.78
SNHG3-201ENST00000413987 ZMAT5Q9UDW3 170 aaKnown RBP10.2□□□□□ -0.78
SNHG3-201ENST00000413987 FZD1Q9UP38 647 aa10.2□□□□□ -0.78
SNHG3-201ENST00000413987 MAPRE3Q9UPY8 281 aa10.2□□□□□ -0.78
SNHG3-201ENST00000413987 TRPC6Q9Y210 931 aa10.2□□□□□ -0.78
SNHG3-201ENST00000413987 CNTNAP1P78357 1384 aa10.2□□□□□ -0.78
SNHG3-201ENST00000413987 SLC4A1P02730 911 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 AKR1B1P15121 316 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 SEPT6Q14141 434 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 MYBPC3Q14896 1274 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 SART3Q15020 963 aaKnown RBP10.19□□□□□ -0.78
SNHG3-201ENST00000413987 MAP7D1Q3KQU3 841 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 WDR93Q6P2C0 686 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 SYNE3Q6ZMZ3 975 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 MIGA2Q7L4E1 593 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 TAX1BP1Q86VP1 789 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 PHKBQ93100 1093 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 CSRNP1Q96S65 589 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 MRIQ9BWK5 157 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 IDI2Q9BXS1 227 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 FAM204AQ9H8W3 233 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 LUC7LQ9NQ29 371 aaKnown RBP10.19□□□□□ -0.78
SNHG3-201ENST00000413987 SERPINB13Q9UIV8 391 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 STX8Q9UNK0 236 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 GPR52Q9Y2T5 361 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 CTAGE15A4D2H0 777 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 KLHL33A6NCF5 533 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 GABRDO14764 452 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms