RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 MAPK7Q13164 816 aa16.2■□□□□ 0.18
TTC39A-208ENST00000413473 KIF22Q14807 665 aa16.2■□□□□ 0.18
TTC39A-208ENST00000413473 AOC3Q16853 763 aa16.2■□□□□ 0.18
TTC39A-208ENST00000413473 SLC9A9Q8IVB4 645 aa16.2■□□□□ 0.18
TTC39A-208ENST00000413473 FMNL3Q8IVF7 1028 aa16.2■□□□□ 0.18
TTC39A-208ENST00000413473 ATP8B4Q8TF62 1192 aa16.2■□□□□ 0.18
TTC39A-208ENST00000413473 STRA6Q9BX79 667 aa16.2■□□□□ 0.18
TTC39A-208ENST00000413473 LRRC4CQ9HCJ2 640 aa16.2■□□□□ 0.18
TTC39A-208ENST00000413473 CNOT8Q9UFF9 292 aaKnown RBP16.2■□□□□ 0.18
TTC39A-208ENST00000413473 ALG6Q9Y672 507 aa16.2■□□□□ 0.18
TTC39A-208ENST00000413473 DCDC2CA8MYV0 355 aa16.2■□□□□ 0.18
TTC39A-208ENST00000413473 TISP43B9A030 160 aa16.2■□□□□ 0.18
TTC39A-208ENST00000413473 TCP10L2B9ZVM9 353 aa16.2■□□□□ 0.18
TTC39A-208ENST00000413473 ZYXQ15942 572 aaKnown RBP16.2■□□□□ 0.18
TTC39A-208ENST00000413473 KRT71Q3SY84 523 aa16.2■□□□□ 0.18
TTC39A-208ENST00000413473 FBXW10Q5XX13 1052 aa16.2■□□□□ 0.18
TTC39A-208ENST00000413473 MICALCLQ6ZW33 695 aa16.2■□□□□ 0.18
TTC39A-208ENST00000413473 NAP1L3Q99457 506 aaPredicted RBP16.2■□□□□ 0.18
TTC39A-208ENST00000413473 FMO2Q99518 471 aa16.2■□□□□ 0.18
TTC39A-208ENST00000413473 PAGR1Q9BTK6 254 aa16.2■□□□□ 0.18
TTC39A-208ENST00000413473 TEKT3Q9BXF9 490 aa16.2■□□□□ 0.18
TTC39A-208ENST00000413473 RAB17Q9H0T7 212 aa16.2■□□□□ 0.18
TTC39A-208ENST00000413473 EMSYQ7Z589 1322 aa16.19■□□□□ 0.18
TTC39A-208ENST00000413473 SRRM3A6NNA2 597 aaPredicted RBP16.19■□□□□ 0.18
TTC39A-208ENST00000413473 K7ENM7 598 aa16.19■□□□□ 0.18
TTC39A-208ENST00000413473 BCRP11274 1271 aa16.19■□□□□ 0.18
TTC39A-208ENST00000413473 KRT13P13646 458 aa16.19■□□□□ 0.18
TTC39A-208ENST00000413473 PPP2R2AP63151 447 aa16.19■□□□□ 0.18
TTC39A-208ENST00000413473 AGBL2Q5U5Z8 902 aa16.19■□□□□ 0.18
TTC39A-208ENST00000413473 AADACL2Q6P093 401 aa16.19■□□□□ 0.18
TTC39A-208ENST00000413473 PADI6Q6TGC4 694 aa16.19■□□□□ 0.18
TTC39A-208ENST00000413473 B3GNT9Q6UX72 402 aa16.19■□□□□ 0.18
TTC39A-208ENST00000413473 ERP44Q9BS26 406 aa16.19■□□□□ 0.18
TTC39A-208ENST00000413473 GOPCQ9HD26 462 aa16.19■□□□□ 0.18
TTC39A-208ENST00000413473 PKD2L1Q9P0L9 805 aa16.19■□□□□ 0.18
TTC39A-208ENST00000413473 SYNPO2Q9UMS6 1093 aa16.19■□□□□ 0.18
TTC39A-208ENST00000413473 MRPL11Q9Y3B7 192 aaKnown RBP16.19■□□□□ 0.18
TTC39A-208ENST00000413473 DAAM1Q9Y4D1 1078 aa16.19■□□□□ 0.18
TTC39A-208ENST00000413473 ATXN2Q99700 1313 aaKnown RBP16.19■□□□□ 0.18
TTC39A-208ENST00000413473 GOLGA6L10A0A0M3HER8 536 aa16.19■□□□□ 0.18
TTC39A-208ENST00000413473 FTLP02792 175 aaPredicted RBP16.19■□□□□ 0.18
TTC39A-208ENST00000413473 MAGOHP61326 146 aaKnown RBP16.19■□□□□ 0.18
TTC39A-208ENST00000413473 MSL1Q68DK7 614 aa16.19■□□□□ 0.18
TTC39A-208ENST00000413473 DUPD1Q68J44 220 aa16.19■□□□□ 0.18
TTC39A-208ENST00000413473 MAGOHBQ96A72 148 aaKnown RBP16.19■□□□□ 0.18
TTC39A-208ENST00000413473 RANBP17Q9H2T7 1088 aaKnown RBP16.19■□□□□ 0.18
TTC39A-208ENST00000413473 EHMT1Q9H9B1 1298 aa16.19■□□□□ 0.18
TTC39A-208ENST00000413473 CTTNBP2NLQ9P2B4 639 aa16.19■□□□□ 0.18
TTC39A-208ENST00000413473 CAPN7Q9Y6W3 813 aa16.19■□□□□ 0.18
TTC39A-208ENST00000413473 COL11A2P13942 1736 aaPredicted RBP16.19■□□□□ 0.18
TTC39A-208ENST00000413473 GMNCA6NCL1 334 aa16.18■□□□□ 0.18
TTC39A-208ENST00000413473 PPFIA2O75334 1257 aa16.18■□□□□ 0.18
TTC39A-208ENST00000413473 PPP3CAQ08209 521 aa16.18■□□□□ 0.18
TTC39A-208ENST00000413473 IFFO1Q0D2I5 559 aa16.18■□□□□ 0.18
TTC39A-208ENST00000413473 ARHGEF19Q8IW93 802 aa16.18■□□□□ 0.18
TTC39A-208ENST00000413473 CHURC1Q8WUH1 139 aa16.18■□□□□ 0.18
TTC39A-208ENST00000413473 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.18■□□□□ 0.18
TTC39A-208ENST00000413473 CHORDC1Q9UHD1 332 aaPredicted RBP16.18■□□□□ 0.18
TTC39A-208ENST00000413473 HERC5Q9UII4 1024 aaKnown RBP16.18■□□□□ 0.18
TTC39A-208ENST00000413473 SLX4Q8IY92 1834 aa16.18■□□□□ 0.18
TTC39A-208ENST00000413473 GCLMP48507 274 aa16.18■□□□□ 0.18
TTC39A-208ENST00000413473 IFT88Q13099 833 aa16.18■□□□□ 0.18
TTC39A-208ENST00000413473 PPP2R5EQ16537 467 aa16.18■□□□□ 0.18
TTC39A-208ENST00000413473 RNF187Q5TA31 235 aaPredicted RBP16.18■□□□□ 0.18
TTC39A-208ENST00000413473 ICE2Q659A1 982 aa16.18■□□□□ 0.18
TTC39A-208ENST00000413473 TEX2Q8IWB9 1127 aa16.18■□□□□ 0.18
TTC39A-208ENST00000413473 RHOT2Q8IXI1 618 aa16.18■□□□□ 0.18
TTC39A-208ENST00000413473 CYFIP2Q96F07 1278 aa16.18■□□□□ 0.18
TTC39A-208ENST00000413473 TXLNGYQ9BZA5 131 aa16.18■□□□□ 0.18
TTC39A-208ENST00000413473 SNX24Q9Y343 169 aa16.18■□□□□ 0.18
TTC39A-208ENST00000413473 VCAM1P19320 739 aa16.18■□□□□ 0.18
TTC39A-208ENST00000413473 INTS8Q75QN2 995 aaKnown RBP16.18■□□□□ 0.18
TTC39A-208ENST00000413473 YTHDF3Q7Z739 585 aaKnown RBP16.18■□□□□ 0.18
TTC39A-208ENST00000413473 KRT35Q92764 455 aa16.18■□□□□ 0.18
TTC39A-208ENST00000413473 CBWD1Q9BRT8 395 aa16.18■□□□□ 0.18
TTC39A-208ENST00000413473 ZDHHC18Q9NUE0 388 aa16.18■□□□□ 0.18
TTC39A-208ENST00000413473 FBXO28Q9NVF7 368 aa16.18■□□□□ 0.18
TTC39A-208ENST00000413473 CLRN2A0PK11 232 aa16.17■□□□□ 0.18
TTC39A-208ENST00000413473 TMEM110-MUSTN1A8MSY1 372 aa16.17■□□□□ 0.18
TTC39A-208ENST00000413473 TRAPPC3O43617 180 aa16.17■□□□□ 0.18
TTC39A-208ENST00000413473 ITGB5P18084 799 aa16.17■□□□□ 0.18
TTC39A-208ENST00000413473 RFX1P22670 979 aa16.17■□□□□ 0.18
TTC39A-208ENST00000413473 USP8P40818 1118 aa16.17■□□□□ 0.18
TTC39A-208ENST00000413473 VAMP7P51809 220 aa16.17■□□□□ 0.18
TTC39A-208ENST00000413473 PLTPP55058 493 aa16.17■□□□□ 0.18
TTC39A-208ENST00000413473 SETQ01105 290 aaPredicted RBP16.17■□□□□ 0.18
TTC39A-208ENST00000413473 CETN1Q12798 172 aa16.17■□□□□ 0.18
TTC39A-208ENST00000413473 MYBPC2Q14324 1141 aa16.17■□□□□ 0.18
TTC39A-208ENST00000413473 ZNF746Q6NUN9 644 aaPredicted RBP16.17■□□□□ 0.18
TTC39A-208ENST00000413473 MMS22LQ6ZRQ5 1243 aa16.17■□□□□ 0.18
TTC39A-208ENST00000413473 KRT27Q7Z3Y8 459 aa16.17■□□□□ 0.18
TTC39A-208ENST00000413473 LDHDQ86WU2 507 aa16.17■□□□□ 0.18
TTC39A-208ENST00000413473 JAMLQ86YT9 394 aa16.17■□□□□ 0.18
TTC39A-208ENST00000413473 ZSWIM2Q8NEG5 633 aa16.17■□□□□ 0.18
TTC39A-208ENST00000413473 MXRA8Q9BRK3 442 aa16.17■□□□□ 0.18
TTC39A-208ENST00000413473 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.17■□□□□ 0.18
TTC39A-208ENST00000413473 LARSQ9P2J5 1176 aaKnown RBP16.17■□□□□ 0.18
TTC39A-208ENST00000413473 TULP1O00294 542 aaPredicted RBP16.17■□□□□ 0.18
TTC39A-208ENST00000413473 MARCKSL1P49006 195 aa16.17■□□□□ 0.18
TTC39A-208ENST00000413473 FNTAP49354 379 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms