RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 SLC6A19Q695T7 634 aa6.23□□□□□ -1.41
LINC00342-201ENST00000412393 CATSPERGQ6ZRH7 1159 aa6.23□□□□□ -1.41
LINC00342-201ENST00000412393 TMEM179Q6ZVK1 233 aa6.23□□□□□ -1.41
LINC00342-201ENST00000412393 CCAR1Q8IX12 1150 aaKnown RBP6.23□□□□□ -1.41
LINC00342-201ENST00000412393 GPRC5AQ8NFJ5 357 aa6.23□□□□□ -1.41
LINC00342-201ENST00000412393 OTUD7AQ8TE49 926 aaPredicted RBP6.23□□□□□ -1.41
LINC00342-201ENST00000412393 APPBP2Q92624 585 aa6.23□□□□□ -1.41
LINC00342-201ENST00000412393 CCDC17Q96LX7 622 aa6.23□□□□□ -1.41
LINC00342-201ENST00000412393 PPP1R9BQ96SB3 815 aa6.23□□□□□ -1.41
LINC00342-201ENST00000412393 STRBPQ96SI9 672 aaKnown RBP6.23□□□□□ -1.41
LINC00342-201ENST00000412393 MAP7D2Q96T17 732 aa6.23□□□□□ -1.41
LINC00342-201ENST00000412393 UPF2Q9HAU5 1272 aaKnown RBP6.23□□□□□ -1.41
LINC00342-201ENST00000412393 TXNRD2Q9NNW7 524 aa6.23□□□□□ -1.41
LINC00342-201ENST00000412393 LUC7LQ9NQ29 371 aaKnown RBP6.23□□□□□ -1.41
LINC00342-201ENST00000412393 RBPJLQ9UBG7 517 aa6.23□□□□□ -1.41
LINC00342-201ENST00000412393 FRMPD3Q5JV73 1810 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 PLXNA1Q9UIW2 1896 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 A0A1W2PRG0 241 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 GSG1L2A8MUP6 293 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 SMIM22K7EJ46 135 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 GPAA1O43292 621 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 GLRX3O76003 335 aaKnown RBP6.22□□□□□ -1.41
LINC00342-201ENST00000412393 HSP90AA1P07900 732 aaKnown RBP6.22□□□□□ -1.41
LINC00342-201ENST00000412393 AKR1B1P15121 316 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 PI3P19957 117 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 MX1P20591 662 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 MAPK4P31152 587 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 GJA8P48165 433 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 TIGD5Q53EQ6 642 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 WIPI1Q5MNZ9 446 aaPredicted RBP6.22□□□□□ -1.41
LINC00342-201ENST00000412393 ANKRD45Q5TZF3 282 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 CTR9Q6PD62 1173 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 C16orf86Q6ZW13 317 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 FRMD5Q7Z6J6 570 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 U2AF1L4Q8WU68 220 aaKnown RBP6.22□□□□□ -1.41
LINC00342-201ENST00000412393 PPP1R13LQ8WUF5 828 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 OSBP2Q969R2 916 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 SHISA4Q96DD7 197 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 Q96M66 194 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 SGPP1Q9BX95 441 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 PORCNQ9H237 461 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 RPAP3Q9H6T3 665 aaPredicted RBP6.22□□□□□ -1.41
LINC00342-201ENST00000412393 SH2D4AQ9H788 454 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 ARPP21Q9UBL0 812 aaPredicted RBP6.22□□□□□ -1.41
LINC00342-201ENST00000412393 GPR160Q9UJ42 338 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 GJD2Q9UKL4 321 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 MYRFQ9Y2G1 1151 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 RABGAP1Q9Y3P9 1069 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 ALPK3Q96L96 1907 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 A0A0G2JMZ2 1700 aa6.22□□□□□ -1.41
LINC00342-201ENST00000412393 MINDY4BA8MYZ0 360 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 M0R2C6 588 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 N4BP3O15049 544 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 CNMDO75829 334 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 SGPL1O95470 568 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 HMGCRP04035 888 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 APPP05067 770 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 GNAT2P19087 354 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 CYP2B6P20813 491 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 RBM25P49756 843 aaKnown RBP6.21□□□□□ -1.42
LINC00342-201ENST00000412393 CCNA1P78396 465 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 ATP2B2Q01814 1243 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 ICA1Q05084 483 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 HDAC1Q13547 482 aaPredicted RBP6.21□□□□□ -1.42
LINC00342-201ENST00000412393 ENOX2Q16206 610 aaKnown RBP6.21□□□□□ -1.42
LINC00342-201ENST00000412393 SBK1Q52WX2 424 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 RASIP1Q5U651 963 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 WDR78Q5VTH9 848 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 GIMAP6Q6P9H5 292 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 LBX2Q6XYB7 198 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 GPR142Q7Z601 462 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 PLEKHH3Q7Z736 793 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 SMC5Q8IY18 1101 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 SOCS4Q8WXH5 440 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 GAL3ST3Q96A11 431 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 GCC1Q96CN9 775 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 DEFB118Q96PH6 123 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 FSD1Q9BTV5 496 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 TANGO6Q9C0B7 1094 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.21□□□□□ -1.42
LINC00342-201ENST00000412393 RWDD1Q9H446 243 aaPredicted RBP6.21□□□□□ -1.42
LINC00342-201ENST00000412393 VCPKMTQ9H867 229 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 SIRT5Q9NXA8 310 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 HOXC10Q9NYD6 342 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 MBD1Q9UIS9 605 aaPredicted RBP6.21□□□□□ -1.42
LINC00342-201ENST00000412393 TMX2Q9Y320 296 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 SMCHD1A6NHR9 2005 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 SALL3Q9BXA9 1300 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 ADAMTS20P59510 1910 aa6.21□□□□□ -1.42
LINC00342-201ENST00000412393 ABLIM1O14639 778 aa6.2□□□□□ -1.42
LINC00342-201ENST00000412393 WDR46O15213 610 aaKnown RBP6.2□□□□□ -1.42
LINC00342-201ENST00000412393 PSPNO60542 156 aa6.2□□□□□ -1.42
LINC00342-201ENST00000412393 TFRCP02786 760 aaKnown RBP6.2□□□□□ -1.42
LINC00342-201ENST00000412393 EEF2P13639 858 aaKnown RBP6.2□□□□□ -1.42
LINC00342-201ENST00000412393 CAPN2P17655 700 aa6.2□□□□□ -1.42
LINC00342-201ENST00000412393 RGS2P41220 211 aa6.2□□□□□ -1.42
LINC00342-201ENST00000412393 TDO2P48775 406 aa6.2□□□□□ -1.42
LINC00342-201ENST00000412393 COG2Q14746 738 aa6.2□□□□□ -1.42
LINC00342-201ENST00000412393 KIAA1755Q5JYT7 1200 aa6.2□□□□□ -1.42
LINC00342-201ENST00000412393 MTERF4Q7Z6M4 381 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms