RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 NOMO2Q5JPE7 1267 aa16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 KIAA1841Q6NSI8 718 aa16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 CATSPER4Q7RTX7 472 aa16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 ZNF410Q86VK4 478 aa16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 KSR1Q8IVT5 923 aa16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 ZDHHC14Q8IZN3 488 aa16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 PLCD3Q8N3E9 789 aa16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 FBXL16Q8N461 479 aa16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 TMEM105Q8N8V8 129 aa16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 SLC22A17Q8WUG5 538 aa16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 BCL7CQ8WUZ0 217 aaPredicted RBP16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 RSPH1Q8WYR4 309 aa16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 AGXT2Q9BYV1 514 aa16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 GBP3Q9H0R5 595 aa16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 NCOA5Q9HCD5 579 aaKnown RBP16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 FAM105AQ9NUU6 356 aa16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 PLXNA3P51805 1871 aa16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 USP34Q70CQ2 3546 aa16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 CARNS1A5YM72 827 aa16■□□□□ 0.15
HLA-DQB2-229ENST00000411527 OFD1O75665 1012 aa16■□□□□ 0.15
HLA-DQB2-229ENST00000411527 TDP2O95551 362 aa16■□□□□ 0.15
HLA-DQB2-229ENST00000411527 PDIA3P30101 505 aaKnown RBP16■□□□□ 0.15
HLA-DQB2-229ENST00000411527 HSPA4P34932 840 aa16■□□□□ 0.15
HLA-DQB2-229ENST00000411527 RAB27AP51159 221 aa16■□□□□ 0.15
HLA-DQB2-229ENST00000411527 B3GNT9Q6UX72 402 aa16■□□□□ 0.15
HLA-DQB2-229ENST00000411527 TMC5Q6UXY8 1006 aa16■□□□□ 0.15
HLA-DQB2-229ENST00000411527 CABP7Q86V35 215 aa16■□□□□ 0.15
HLA-DQB2-229ENST00000411527 C22orf23Q9BZE7 217 aa16■□□□□ 0.15
HLA-DQB2-229ENST00000411527 DNAJB4Q9UDY4 337 aa16■□□□□ 0.15
HLA-DQB2-229ENST00000411527 PCDHA4Q9UN74 947 aa16■□□□□ 0.15
HLA-DQB2-229ENST00000411527 USTQ9Y2C2 406 aa16■□□□□ 0.15
HLA-DQB2-229ENST00000411527 CYP3A7-CYP3A51PA0A087WV96 503 aa15.99■□□□□ 0.15
HLA-DQB2-229ENST00000411527 ZNF623O75123 536 aa15.99■□□□□ 0.15
HLA-DQB2-229ENST00000411527 CYP3A7P24462 503 aa15.99■□□□□ 0.15
HLA-DQB2-229ENST00000411527 SLC11A1P49279 550 aa15.99■□□□□ 0.15
HLA-DQB2-229ENST00000411527 ASTLQ6HA08 431 aaPredicted RBP15.99■□□□□ 0.15
HLA-DQB2-229ENST00000411527 CENPQQ7L2Z9 268 aaPredicted RBP15.99■□□□□ 0.15
HLA-DQB2-229ENST00000411527 ZNF280BQ86YH2 543 aa15.99■□□□□ 0.15
HLA-DQB2-229ENST00000411527 FEZF2Q8TBJ5 459 aa15.99■□□□□ 0.15
HLA-DQB2-229ENST00000411527 SNX27Q96L92 541 aa15.99■□□□□ 0.15
HLA-DQB2-229ENST00000411527 NLRP4Q96MN2 994 aa15.99■□□□□ 0.15
HLA-DQB2-229ENST00000411527 MFSD1Q9H3U5 465 aa15.99■□□□□ 0.15
HLA-DQB2-229ENST00000411527 CYP26B1Q9NR63 512 aa15.99■□□□□ 0.15
HLA-DQB2-229ENST00000411527 CACNA1HO95180 2353 aa15.98■□□□□ 0.15
HLA-DQB2-229ENST00000411527 SPDYE4A6NLX3 237 aa15.98■□□□□ 0.15
HLA-DQB2-229ENST00000411527 PSMA5P28066 241 aa15.98■□□□□ 0.15
HLA-DQB2-229ENST00000411527 SSRP1Q08945 709 aaKnown RBP15.98■□□□□ 0.15
HLA-DQB2-229ENST00000411527 PTPN14Q15678 1187 aa15.98■□□□□ 0.15
HLA-DQB2-229ENST00000411527 ANO5Q75V66 913 aa15.98■□□□□ 0.15
HLA-DQB2-229ENST00000411527 PPFIBP1Q86W92 1011 aa15.98■□□□□ 0.15
HLA-DQB2-229ENST00000411527 TRIM22Q8IYM9 498 aa15.98■□□□□ 0.15
HLA-DQB2-229ENST00000411527 URGCPQ8TCY9 931 aa15.98■□□□□ 0.15
HLA-DQB2-229ENST00000411527 ACSF2Q96CM8 615 aaPredicted RBP15.98■□□□□ 0.15
HLA-DQB2-229ENST00000411527 PGBD4Q96DM1 585 aa15.98■□□□□ 0.15
HLA-DQB2-229ENST00000411527 JPH2Q9BR39 696 aaPredicted RBP15.98■□□□□ 0.15
HLA-DQB2-229ENST00000411527 VN1R3Q9BXE9 311 aa15.98■□□□□ 0.15
HLA-DQB2-229ENST00000411527 IFT122Q9HBG6 1241 aa15.98■□□□□ 0.15
HLA-DQB2-229ENST00000411527 PCDHB2Q9Y5E7 798 aa15.98■□□□□ 0.15
HLA-DQB2-229ENST00000411527 DENND4AQ7Z401 1863 aa15.97■□□□□ 0.15
HLA-DQB2-229ENST00000411527 PROB1E7EW31 1015 aa15.97■□□□□ 0.15
HLA-DQB2-229ENST00000411527 B4GALT3O60512 393 aa15.97■□□□□ 0.15
HLA-DQB2-229ENST00000411527 DDHD2O94830 711 aa15.97■□□□□ 0.15
HLA-DQB2-229ENST00000411527 SSBP05455 408 aaKnown RBP eCLIP15.97■□□□□ 0.15
HLA-DQB2-229ENST00000411527 KLRC2P26717 231 aa15.97■□□□□ 0.15
HLA-DQB2-229ENST00000411527 EVCP57679 992 aa15.97■□□□□ 0.15
HLA-DQB2-229ENST00000411527 PSMC5P62195 406 aa15.97■□□□□ 0.15
HLA-DQB2-229ENST00000411527 PLA2G4FQ68DD2 849 aa15.97■□□□□ 0.15
HLA-DQB2-229ENST00000411527 AGMOQ6ZNB7 445 aa15.97■□□□□ 0.15
HLA-DQB2-229ENST00000411527 GPR149Q86SP6 731 aa15.97■□□□□ 0.15
HLA-DQB2-229ENST00000411527 BLIDQ8IZY5 108 aa15.97■□□□□ 0.15
HLA-DQB2-229ENST00000411527 ETNPPLQ8TBG4 499 aa15.97■□□□□ 0.15
HLA-DQB2-229ENST00000411527 MBOAT7Q96N66 472 aa15.97■□□□□ 0.15
HLA-DQB2-229ENST00000411527 KLHL5Q96PQ7 755 aa15.97■□□□□ 0.15
HLA-DQB2-229ENST00000411527 EMILIN2Q9BXX0 1053 aa15.97■□□□□ 0.15
HLA-DQB2-229ENST00000411527 SFXN1Q9H9B4 322 aa15.97■□□□□ 0.15
HLA-DQB2-229ENST00000411527 ZFHX2Q9C0A1 2572 aaPredicted RBP15.97■□□□□ 0.15
HLA-DQB2-229ENST00000411527 ALDH2P05091 517 aa15.96■□□□□ 0.15
HLA-DQB2-229ENST00000411527 CLCN5P51795 746 aa15.96■□□□□ 0.15
HLA-DQB2-229ENST00000411527 NPEPPSP55786 919 aa15.96■□□□□ 0.15
HLA-DQB2-229ENST00000411527 NONOQ15233 471 aaKnown RBP eCLIP15.96■□□□□ 0.15
HLA-DQB2-229ENST00000411527 MOXD1Q6UVY6 613 aa15.96■□□□□ 0.15
HLA-DQB2-229ENST00000411527 OTOP3Q7RTS5 596 aa15.96■□□□□ 0.15
HLA-DQB2-229ENST00000411527 ASCL5Q7RTU5 278 aa15.96■□□□□ 0.15
HLA-DQB2-229ENST00000411527 MRPL10Q7Z7H8 261 aaKnown RBP15.96■□□□□ 0.15
HLA-DQB2-229ENST00000411527 FAM193BQ96PV7 902 aaPredicted RBP15.96■□□□□ 0.15
HLA-DQB2-229ENST00000411527 SLKQ9H2G2 1235 aaPredicted RBP15.96■□□□□ 0.15
HLA-DQB2-229ENST00000411527 AGPAT5Q9NUQ2 364 aa15.96■□□□□ 0.15
HLA-DQB2-229ENST00000411527 KANSL3Q9P2N6 904 aa15.96■□□□□ 0.15
HLA-DQB2-229ENST00000411527 DDX25Q9UHL0 483 aaKnown RBP15.96■□□□□ 0.15
HLA-DQB2-229ENST00000411527 FAN1Q9Y2M0 1017 aa15.96■□□□□ 0.15
HLA-DQB2-229ENST00000411527 COL4A3BPQ9Y5P4 624 aa15.96■□□□□ 0.15
HLA-DQB2-229ENST00000411527 C2orf16Q68DN1 1984 aa15.96■□□□□ 0.15
HLA-DQB2-229ENST00000411527 M0R2N6 131 aa15.95■□□□□ 0.14
HLA-DQB2-229ENST00000411527 EML1O00423 815 aa15.95■□□□□ 0.14
HLA-DQB2-229ENST00000411527 CPLX1O14810 134 aa15.95■□□□□ 0.14
HLA-DQB2-229ENST00000411527 DEXIO95424 95 aa15.95■□□□□ 0.14
HLA-DQB2-229ENST00000411527 CNPP09543 421 aaKnown RBP15.95■□□□□ 0.14
HLA-DQB2-229ENST00000411527 SRGAP2CP0DJJ0 459 aa15.95■□□□□ 0.14
HLA-DQB2-229ENST00000411527 NBL1P41271 181 aa15.95■□□□□ 0.14
HLA-DQB2-229ENST00000411527 QARSP47897 775 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms