RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 MYH9P35579 1960 aaKnown RBP21.9■■□□□ 1.1
USP39-204ENST00000409766 ATP8B3O60423 1300 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 EMSYQ7Z589 1322 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 PALMO75781 387 aa21.89■■□□□ 1.1
USP39-204ENST00000409766 PLA2G4AP47712 749 aa21.89■■□□□ 1.1
USP39-204ENST00000409766 SP2Q02086 613 aa21.89■■□□□ 1.1
USP39-204ENST00000409766 CNTN2Q02246 1040 aa21.89■■□□□ 1.1
USP39-204ENST00000409766 PPP3CAQ08209 521 aa21.89■■□□□ 1.1
USP39-204ENST00000409766 STXBP2Q15833 593 aa21.89■■□□□ 1.1
USP39-204ENST00000409766 GLIPR1L2Q4G1C9 344 aa21.89■■□□□ 1.1
USP39-204ENST00000409766 BEND6Q5SZJ8 279 aaPredicted RBP21.89■■□□□ 1.1
USP39-204ENST00000409766 VPS36Q86VN1 386 aa21.89■■□□□ 1.1
USP39-204ENST00000409766 MAP4K3Q8IVH8 894 aa21.89■■□□□ 1.1
USP39-204ENST00000409766 SULF1Q8IWU6 871 aa21.89■■□□□ 1.1
USP39-204ENST00000409766 BTBD7Q9P203 1132 aa21.89■■□□□ 1.1
USP39-204ENST00000409766 EXOC7Q9UPT5 735 aa21.89■■□□□ 1.1
USP39-204ENST00000409766 DDX3XO00571 662 aaKnown RBP eCLIP21.89■■□□□ 1.099e-13■■■■□ 21.9
USP39-204ENST00000409766 P4HA2O15460 535 aa21.89■■□□□ 1.09
USP39-204ENST00000409766 PEX10O60683 326 aa21.89■■□□□ 1.09
USP39-204ENST00000409766 EIF3JO75822 258 aaKnown RBP21.89■■□□□ 1.09
USP39-204ENST00000409766 ADSSP30520 456 aa21.89■■□□□ 1.09
USP39-204ENST00000409766 ICAM3P32942 547 aa21.89■■□□□ 1.09
USP39-204ENST00000409766 SP4Q02446 784 aa21.89■■□□□ 1.09
USP39-204ENST00000409766 ITIH3Q06033 890 aa21.89■■□□□ 1.09
USP39-204ENST00000409766 PHLDB3Q6NSJ2 640 aa21.89■■□□□ 1.09
USP39-204ENST00000409766 ANKRD35Q8N283 1001 aa21.89■■□□□ 1.09
USP39-204ENST00000409766 OLIG1Q8TAK6 271 aa21.89■■□□□ 1.09
USP39-204ENST00000409766 PLEKHO2Q8TD55 490 aa21.89■■□□□ 1.09
USP39-204ENST00000409766 KIFC3Q9BVG8 833 aa21.89■■□□□ 1.09
USP39-204ENST00000409766 KMT5AQ9NQR1 393 aa21.89■■□□□ 1.09
USP39-204ENST00000409766 PFASO15067 1338 aa21.88■■□□□ 1.09
USP39-204ENST00000409766 N4BP1O75113 896 aaKnown RBP21.88■■□□□ 1.09
USP39-204ENST00000409766 ERLIN1O75477 346 aa21.88■■□□□ 1.09
USP39-204ENST00000409766 DGAT1O75907 488 aa21.88■■□□□ 1.09
USP39-204ENST00000409766 YBX3P16989 372 aaKnown RBP eCLIP21.88■■□□□ 1.096e-7■■□□□ 12.2
USP39-204ENST00000409766 RFX1P22670 979 aa21.88■■□□□ 1.09
USP39-204ENST00000409766 CXCR5P32302 372 aa21.88■■□□□ 1.09
USP39-204ENST00000409766 SOX10P56693 466 aa21.88■■□□□ 1.09
USP39-204ENST00000409766 PRKCEQ02156 737 aa21.88■■□□□ 1.09
USP39-204ENST00000409766 FSTL1Q12841 308 aa21.88■■□□□ 1.09
USP39-204ENST00000409766 RIOX2Q8IUF8 465 aa21.88■■□□□ 1.09
USP39-204ENST00000409766 DENND3A2RUS2 1198 aa21.87■■□□□ 1.09
USP39-204ENST00000409766 ANKRD63C9JTQ0 380 aa21.87■■□□□ 1.09
USP39-204ENST00000409766 SUPT20HL2P0C7V6 817 aa21.87■■□□□ 1.09
USP39-204ENST00000409766 MIS18BP1Q6P0N0 1132 aa21.87■■□□□ 1.09
USP39-204ENST00000409766 FMNL3Q8IVF7 1028 aa21.87■■□□□ 1.09
USP39-204ENST00000409766 MCPH1Q8NEM0 835 aa21.87■■□□□ 1.09
USP39-204ENST00000409766 SLC30A5Q8TAD4 765 aa21.87■■□□□ 1.09
USP39-204ENST00000409766 PSMB7Q99436 277 aa21.87■■□□□ 1.09
USP39-204ENST00000409766 ABCB6Q9NP58 842 aa21.87■■□□□ 1.09
USP39-204ENST00000409766 XPNPEP1Q9NQW7 623 aa21.87■■□□□ 1.09
USP39-204ENST00000409766 CYP26B1Q9NR63 512 aa21.87■■□□□ 1.09
USP39-204ENST00000409766 SEPT9Q9UHD8 586 aaPredicted RBP21.87■■□□□ 1.09
USP39-204ENST00000409766 IGSF9BQ9UPX0 1349 aa21.87■■□□□ 1.09
USP39-204ENST00000409766 SRCAPQ6ZRS2 3230 aa21.87■■□□□ 1.09
USP39-204ENST00000409766 TARSL2A2RTX5 802 aaKnown RBP21.87■■□□□ 1.09
USP39-204ENST00000409766 SORBS3O60504 671 aa21.87■■□□□ 1.09
USP39-204ENST00000409766 CNGA1P29973 690 aa21.87■■□□□ 1.09
USP39-204ENST00000409766 RTP1P59025 263 aa21.87■■□□□ 1.09
USP39-204ENST00000409766 EPC2Q52LR7 807 aa21.87■■□□□ 1.09
USP39-204ENST00000409766 MEI1Q5TIA1 1274 aa21.87■■□□□ 1.09
USP39-204ENST00000409766 SYT11Q9BT88 431 aa21.87■■□□□ 1.09
USP39-204ENST00000409766 RNF181Q9P0P0 153 aa21.87■■□□□ 1.09
USP39-204ENST00000409766 FBXO40Q9UH90 709 aa21.87■■□□□ 1.09
USP39-204ENST00000409766 GRID2IPA4D2P6 1211 aa21.86■■□□□ 1.09
USP39-204ENST00000409766 PMM2O15305 246 aa21.86■■□□□ 1.09
USP39-204ENST00000409766 ATG7O95352 703 aa21.86■■□□□ 1.09
USP39-204ENST00000409766 ADRB2P07550 413 aa21.86■■□□□ 1.09
USP39-204ENST00000409766 GCLMP48507 274 aa21.86■■□□□ 1.09
USP39-204ENST00000409766 C2orf54Q08AI8 447 aa21.86■■□□□ 1.09
USP39-204ENST00000409766 CETN1Q12798 172 aa21.86■■□□□ 1.09
USP39-204ENST00000409766 MAP2K7O14733 419 aa21.85■■□□□ 1.09
USP39-204ENST00000409766 IRF6O14896 467 aa21.85■■□□□ 1.09
USP39-204ENST00000409766 ALDH5A1P51649 535 aaPredicted RBP21.85■■□□□ 1.09
USP39-204ENST00000409766 SNRNP35Q16560 246 aaKnown RBP21.85■■□□□ 1.09
USP39-204ENST00000409766 XKR3Q5GH77 459 aa21.85■■□□□ 1.09
USP39-204ENST00000409766 CYFIP1Q7L576 1253 aa21.85■■□□□ 1.09
USP39-204ENST00000409766 DNAAF5Q86Y56 855 aa21.85■■□□□ 1.09
USP39-204ENST00000409766 MMGT1Q8N4V1 131 aa21.85■■□□□ 1.09
USP39-204ENST00000409766 PROCA1Q8NCQ7 364 aaPredicted RBP21.85■■□□□ 1.09
USP39-204ENST00000409766 SPATA4Q8NEY3 305 aa21.85■■□□□ 1.09
USP39-204ENST00000409766 LNX1Q8TBB1 728 aaPredicted RBP21.85■■□□□ 1.09
USP39-204ENST00000409766 RNF216Q9NWF9 866 aaPredicted RBP21.85■■□□□ 1.09
USP39-204ENST00000409766 INTUQ9ULD6 942 aa21.85■■□□□ 1.09
USP39-204ENST00000409766 L1RE1Q9UN81 338 aa21.85■■□□□ 1.09
USP39-204ENST00000409766 ADGRA3Q8IWK6 1321 aa21.85■■□□□ 1.09
USP39-204ENST00000409766 A0A0G2JLL6 359 aaPredicted RBP21.85■■□□□ 1.09
USP39-204ENST00000409766 GOLGA8IPA6NC78 632 aa21.85■■□□□ 1.09
USP39-204ENST00000409766 GOLGA8JA6NMD2 632 aa21.85■■□□□ 1.09
USP39-204ENST00000409766 FTCDO95954 541 aa21.85■■□□□ 1.09
USP39-204ENST00000409766 IREB2P48200 963 aaKnown RBP21.85■■□□□ 1.09
USP39-204ENST00000409766 PPATQ06203 517 aa21.85■■□□□ 1.09
USP39-204ENST00000409766 PRRT2Q7Z6L0 340 aaPredicted RBP21.85■■□□□ 1.09
USP39-204ENST00000409766 CBWD2Q8IUF1 395 aa21.85■■□□□ 1.09
USP39-204ENST00000409766 ZNF526Q8TF50 670 aaPredicted RBP21.85■■□□□ 1.09
USP39-204ENST00000409766 ATP6V0A4Q9HBG4 840 aa21.85■■□□□ 1.09
USP39-204ENST00000409766 MAFBQ9Y5Q3 323 aaPredicted RBP21.85■■□□□ 1.09
USP39-204ENST00000409766 SYNGAP1Q96PV0 1343 aa21.85■■□□□ 1.09
USP39-204ENST00000409766 H2AFZP0C0S5 128 aa21.84■■□□□ 1.09
USP39-204ENST00000409766 CCDC172P0C7W6 258 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms