RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 FRMD4BQ9Y2L6 1034 aa15.39■□□□□ 0.05
GPNMB-203ENST00000409458 DYNC1LI2O43237 492 aaPredicted RBP15.38■□□□□ 0.05
GPNMB-203ENST00000409458 NRDCO43847 1150 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 EXOC3O60645 756 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 C22orf31O95567 290 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 INSRRP14616 1297 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 TRIM21P19474 475 aaKnown RBP15.38■□□□□ 0.05
GPNMB-203ENST00000409458 ADSSP30520 456 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 IGBP1P78318 339 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 KCNMA1Q12791 1236 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 DGKDQ16760 1214 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 ZNF484Q5JVG2 852 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 IER5Q5VY09 327 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 EXOC8Q8IYI6 725 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 REM2Q8IYK8 340 aaPredicted RBP15.38■□□□□ 0.05
GPNMB-203ENST00000409458 PRPF31Q8WWY3 499 aaKnown RBP15.38■□□□□ 0.05
GPNMB-203ENST00000409458 SLC35C1Q96A29 364 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 BAG1Q99933 345 aaPredicted RBP15.38■□□□□ 0.05
GPNMB-203ENST00000409458 ABHD10Q9NUJ1 306 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 KCNG1Q9UIX4 513 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 CASP8AP2Q9UKL3 1982 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 H3BRB1 525 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 EPHB6O15197 1021 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 AFPP02771 609 aaKnown RBP15.38■□□□□ 0.05
GPNMB-203ENST00000409458 YY1P25490 414 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 IRX5P78411 483 aaPredicted RBP15.38■□□□□ 0.05
GPNMB-203ENST00000409458 PRKCZQ05513 592 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 PPP2R3AQ06190 1150 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 FIGNQ5HY92 759 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 TCERG1LQ5VWI1 586 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 RETREG2Q8NC44 543 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 TRPV1Q8NER1 839 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 TCP11Q8WWU5 503 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 PSPC1Q8WXF1 523 aaKnown RBP15.38■□□□□ 0.05
GPNMB-203ENST00000409458 TRIB2Q92519 343 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 CCDC51Q96ER9 411 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 JPH2Q9BR39 696 aaPredicted RBP15.38■□□□□ 0.05
GPNMB-203ENST00000409458 NUP58Q9BVL2 599 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 TUT1Q9H6E5 874 aaKnown RBP15.38■□□□□ 0.05
GPNMB-203ENST00000409458 CAPN11Q9UMQ6 739 aa15.38■□□□□ 0.05
GPNMB-203ENST00000409458 PHLPP2Q6ZVD8 1323 aa15.37■□□□□ 0.05
GPNMB-203ENST00000409458 A6NJR5 290 aa15.37■□□□□ 0.05
GPNMB-203ENST00000409458 HNRNPDLO14979 420 aaKnown RBP15.37■□□□□ 0.05
GPNMB-203ENST00000409458 ADCY3O60266 1144 aa15.37■□□□□ 0.05
GPNMB-203ENST00000409458 CNGA1P29973 690 aa15.37■□□□□ 0.05
GPNMB-203ENST00000409458 ABCD1P33897 745 aa15.37■□□□□ 0.05
GPNMB-203ENST00000409458 KRT9P35527 623 aa15.37■□□□□ 0.05
GPNMB-203ENST00000409458 FLT3LGP49771 235 aa15.37■□□□□ 0.05
GPNMB-203ENST00000409458 CLCN3P51790 818 aa15.37■□□□□ 0.05
GPNMB-203ENST00000409458 LAMTOR4Q0VGL1 99 aa15.37■□□□□ 0.05
GPNMB-203ENST00000409458 CDCA2Q69YH5 1023 aaPredicted RBP15.37■□□□□ 0.05
GPNMB-203ENST00000409458 XXYLT1Q8NBI6 393 aa15.37■□□□□ 0.05
GPNMB-203ENST00000409458 RDH13Q8NBN7 331 aa15.37■□□□□ 0.05
GPNMB-203ENST00000409458 BICD1Q96G01 975 aa15.37■□□□□ 0.05
GPNMB-203ENST00000409458 MMRN2Q9H8L6 949 aa15.37■□□□□ 0.05
GPNMB-203ENST00000409458 FAM207AQ9NSI2 230 aaPredicted RBP15.37■□□□□ 0.05
GPNMB-203ENST00000409458 AGPAT5Q9NUQ2 364 aa15.37■□□□□ 0.05
GPNMB-203ENST00000409458 SPTLC3Q9NUV7 552 aa15.37■□□□□ 0.05
GPNMB-203ENST00000409458 SUCLA2Q9P2R7 463 aaPredicted RBP15.37■□□□□ 0.05
GPNMB-203ENST00000409458 USP20Q9Y2K6 914 aa15.37■□□□□ 0.05
GPNMB-203ENST00000409458 COL1A2P08123 1366 aa15.37■□□□□ 0.05
GPNMB-203ENST00000409458 A0A1W2PQJ5 194 aa15.36■□□□□ 0.05
GPNMB-203ENST00000409458 EDN1P05305 212 aa15.36■□□□□ 0.05
GPNMB-203ENST00000409458 GJB1P08034 283 aa15.36■□□□□ 0.05
GPNMB-203ENST00000409458 TRIM49P0CI25 452 aa15.36■□□□□ 0.05
GPNMB-203ENST00000409458 TRIM49CP0CI26 452 aa15.36■□□□□ 0.05
GPNMB-203ENST00000409458 FECHP22830 423 aa15.36■□□□□ 0.05
GPNMB-203ENST00000409458 CLCN1P35523 988 aa15.36■□□□□ 0.05
GPNMB-203ENST00000409458 STRN3Q13033 797 aa15.36■□□□□ 0.05
GPNMB-203ENST00000409458 NOLC1Q14978 699 aaKnown RBP eCLIP15.36■□□□□ 0.05
GPNMB-203ENST00000409458 BRDTQ58F21 947 aaPredicted RBP15.36■□□□□ 0.05
GPNMB-203ENST00000409458 EFCAB12Q6NXP0 572 aa15.36■□□□□ 0.05
GPNMB-203ENST00000409458 SAAL1Q96ER3 474 aa15.36■□□□□ 0.05
GPNMB-203ENST00000409458 CRACR2AQ9BSW2 395 aa15.36■□□□□ 0.05
GPNMB-203ENST00000409458 LSM14BQ9BX40 385 aaKnown RBP15.36■□□□□ 0.05
GPNMB-203ENST00000409458 LUC7L2Q9Y383 392 aaKnown RBP15.36■□□□□ 0.05
GPNMB-203ENST00000409458 EVPLQ92817 2033 aa15.36■□□□□ 0.05
GPNMB-203ENST00000409458 THSD7BQ9C0I4 1608 aa15.36■□□□□ 0.05
GPNMB-203ENST00000409458 GOLGA8IPA6NC78 632 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 GOLGA8JA6NMD2 632 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 USP27XA6NNY8 438 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 ARHGAP6O43182 974 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 STX10O60499 249 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 PIGRP01833 764 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 ADRB2P07550 413 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 CYBAP13498 195 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 SCP2P22307 547 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 KCNJ6P48051 423 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 LIG4P49917 911 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 SP3Q02447 781 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 BFSP1Q12934 665 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 PPFIA1Q13136 1202 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 MXD4Q14582 209 aaPredicted RBP15.35■□□□□ 0.05
GPNMB-203ENST00000409458 RHPN2Q8IUC4 686 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 METTL13Q8N6R0 699 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 LINC01465Q8N7H1 131 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 DNAJC7Q99615 494 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 CFHR5Q9BXR6 569 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 CCDC113Q9H0I3 377 aa15.35■□□□□ 0.05
GPNMB-203ENST00000409458 TMEM134Q9H6X4 195 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms