RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 CSPG5O95196 566 aa20.58■□□□□ 0.89
PTPN18-203ENST00000409022 RPA1P27694 616 aa20.58■□□□□ 0.89
PTPN18-203ENST00000409022 AXLP30530 894 aa20.58■□□□□ 0.89
PTPN18-203ENST00000409022 FXR2P51116 673 aaKnown RBP eCLIP20.58■□□□□ 0.89
PTPN18-203ENST00000409022 BMS1Q14692 1282 aaKnown RBP20.58■□□□□ 0.89
PTPN18-203ENST00000409022 COL19A1Q14993 1142 aa20.58■□□□□ 0.89
PTPN18-203ENST00000409022 RILPL1Q5EBL4 403 aa20.58■□□□□ 0.89
PTPN18-203ENST00000409022 CNNM3Q8NE01 707 aa20.58■□□□□ 0.89
PTPN18-203ENST00000409022 HELQQ8TDG4 1101 aa20.58■□□□□ 0.89
PTPN18-203ENST00000409022 CCDC51Q96ER9 411 aa20.58■□□□□ 0.89
PTPN18-203ENST00000409022 CWH43Q9H720 699 aa20.58■□□□□ 0.89
PTPN18-203ENST00000409022 SMC3Q9UQE7 1217 aa20.58■□□□□ 0.89
PTPN18-203ENST00000409022 VCANP13611 3396 aa20.57■□□□□ 0.88
PTPN18-203ENST00000409022 WDR81Q562E7 1941 aa20.57■□□□□ 0.88
PTPN18-203ENST00000409022 LOXHD1Q8IVV2 1947 aa20.57■□□□□ 0.88
PTPN18-203ENST00000409022 INO80B-WBP1J3KQ70 363 aa20.57■□□□□ 0.88
PTPN18-203ENST00000409022 USO1O60763 962 aaKnown RBP20.57■□□□□ 0.88
PTPN18-203ENST00000409022 SPATA31C1P0DKV0 1188 aa20.57■□□□□ 0.88
PTPN18-203ENST00000409022 ALDH7A1P49419 539 aaKnown RBP20.57■□□□□ 0.88
PTPN18-203ENST00000409022 PTENP60484 403 aa20.57■□□□□ 0.88
PTPN18-203ENST00000409022 PLCB3Q01970 1234 aa20.57■□□□□ 0.88
PTPN18-203ENST00000409022 PDIA5Q14554 519 aa20.57■□□□□ 0.88
PTPN18-203ENST00000409022 CLLU1OSQ5K130 101 aa20.57■□□□□ 0.88
PTPN18-203ENST00000409022 KCNT2Q6UVM3 1135 aa20.57■□□□□ 0.88
PTPN18-203ENST00000409022 URGCPQ8TCY9 931 aa20.57■□□□□ 0.88
PTPN18-203ENST00000409022 NFKBIZQ9BYH8 718 aa20.57■□□□□ 0.88
PTPN18-203ENST00000409022 XPNPEP1Q9NQW7 623 aa20.57■□□□□ 0.88
PTPN18-203ENST00000409022 RNF19AQ9NV58 838 aa20.57■□□□□ 0.88
PTPN18-203ENST00000409022 LRWD1Q9UFC0 647 aa20.57■□□□□ 0.88
PTPN18-203ENST00000409022 CNTNAP2Q9UHC6 1331 aa20.56■□□□□ 0.88
PTPN18-203ENST00000409022 NLRC5Q86WI3 1866 aa20.56■□□□□ 0.88
PTPN18-203ENST00000409022 ARHGEF35A5YM69 484 aa20.56■□□□□ 0.88
PTPN18-203ENST00000409022 GJB2P29033 226 aa20.56■□□□□ 0.88
PTPN18-203ENST00000409022 ARL2P36404 184 aa20.56■□□□□ 0.88
PTPN18-203ENST00000409022 HYAL1Q12794 435 aa20.56■□□□□ 0.88
PTPN18-203ENST00000409022 PTCRAQ6ISU1 281 aaPredicted RBP20.56■□□□□ 0.88
PTPN18-203ENST00000409022 NOTUMQ6P988 496 aa20.56■□□□□ 0.88
PTPN18-203ENST00000409022 IFNLR1Q8IU57 520 aaPredicted RBP20.56■□□□□ 0.88
PTPN18-203ENST00000409022 HACE1Q8IYU2 909 aa20.56■□□□□ 0.88
PTPN18-203ENST00000409022 MRPS27Q92552 414 aaKnown RBP20.56■□□□□ 0.88
PTPN18-203ENST00000409022 IGFLR1Q9H665 355 aa20.56■□□□□ 0.88
PTPN18-203ENST00000409022 UBN1Q9NPG3 1134 aa20.56■□□□□ 0.88
PTPN18-203ENST00000409022 SPG21Q9NZD8 308 aa20.56■□□□□ 0.88
PTPN18-203ENST00000409022 PCDHB2Q9Y5E7 798 aa20.56■□□□□ 0.88
PTPN18-203ENST00000409022 MED24O75448 989 aa20.55■□□□□ 0.88
PTPN18-203ENST00000409022 SRGAP2BP0DMP2 458 aa20.55■□□□□ 0.88
PTPN18-203ENST00000409022 ATF7P17544 494 aaPredicted RBP20.55■□□□□ 0.88
PTPN18-203ENST00000409022 DNAJB1P25685 340 aa20.55■□□□□ 0.88
PTPN18-203ENST00000409022 CCT6AP40227 531 aaKnown RBP20.55■□□□□ 0.88
PTPN18-203ENST00000409022 RNASELQ05823 741 aaKnown RBP20.55■□□□□ 0.88
PTPN18-203ENST00000409022 PTGDRQ13258 359 aa20.55■□□□□ 0.88
PTPN18-203ENST00000409022 CAMK1Q14012 370 aa20.55■□□□□ 0.88
PTPN18-203ENST00000409022 LRRC55Q6ZSA7 311 aa20.55■□□□□ 0.88
PTPN18-203ENST00000409022 CDCA3Q99618 268 aaPredicted RBP20.55■□□□□ 0.88
PTPN18-203ENST00000409022 POLR3FQ9H1D9 316 aaPredicted RBP20.55■□□□□ 0.88
PTPN18-203ENST00000409022 TLE6Q9H808 572 aa20.55■□□□□ 0.88
PTPN18-203ENST00000409022 NGRNQ9NPE2 291 aaKnown RBP20.55■□□□□ 0.88
PTPN18-203ENST00000409022 KANSL3Q9P2N6 904 aa20.55■□□□□ 0.88
PTPN18-203ENST00000409022 H3BQ06 376 aaPredicted RBP20.54■□□□□ 0.88
PTPN18-203ENST00000409022 PRPHP41219 470 aa20.54■□□□□ 0.88
PTPN18-203ENST00000409022 NDUFV1P49821 464 aa20.54■□□□□ 0.88
PTPN18-203ENST00000409022 CAPSQ13938 189 aa20.54■□□□□ 0.88
PTPN18-203ENST00000409022 CTC1Q2NKJ3 1217 aa20.54■□□□□ 0.88
PTPN18-203ENST00000409022 NOMO2Q5JPE7 1267 aa20.54■□□□□ 0.88
PTPN18-203ENST00000409022 KRT79Q5XKE5 535 aa20.54■□□□□ 0.88
PTPN18-203ENST00000409022 POTEGQ6S5H5 508 aa20.54■□□□□ 0.88
PTPN18-203ENST00000409022 DTHD1Q6ZMT9 781 aa20.54■□□□□ 0.88
PTPN18-203ENST00000409022 ZBTB8OSQ8IWT0 167 aa20.54■□□□□ 0.88
PTPN18-203ENST00000409022 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.54■□□□□ 0.88
PTPN18-203ENST00000409022 TMEM169Q96HH4 297 aa20.54■□□□□ 0.88
PTPN18-203ENST00000409022 TRIM6Q9C030 488 aaPredicted RBP20.54■□□□□ 0.88
PTPN18-203ENST00000409022 MINDY3Q9H8M7 445 aa20.54■□□□□ 0.88
PTPN18-203ENST00000409022 ENTPD7Q9NQZ7 604 aa20.54■□□□□ 0.88
PTPN18-203ENST00000409022 DAXXQ9UER7 740 aaPredicted RBP20.54■□□□□ 0.88
PTPN18-203ENST00000409022 STK39Q9UEW8 545 aa20.54■□□□□ 0.88
PTPN18-203ENST00000409022 SPTBN5Q9NRC6 3674 aaKnown RBP20.54■□□□□ 0.88
PTPN18-203ENST00000409022 GLRA2P23416 452 aa20.53■□□□□ 0.88
PTPN18-203ENST00000409022 IRS1P35568 1242 aa20.53■□□□□ 0.88
PTPN18-203ENST00000409022 NRIP1P48552 1158 aa20.53■□□□□ 0.88
PTPN18-203ENST00000409022 PPP2R5AQ15172 486 aa20.53■□□□□ 0.88
PTPN18-203ENST00000409022 PADI6Q6TGC4 694 aa20.53■□□□□ 0.88
PTPN18-203ENST00000409022 MRPL10Q7Z7H8 261 aaKnown RBP20.53■□□□□ 0.88
PTPN18-203ENST00000409022 EFHBQ8N7U6 833 aa20.53■□□□□ 0.88
PTPN18-203ENST00000409022 C4orf32Q8N8J7 132 aa20.53■□□□□ 0.88
PTPN18-203ENST00000409022 ASAP3Q8TDY4 903 aa20.53■□□□□ 0.88
PTPN18-203ENST00000409022 C2orf40Q9H1Z8 148 aa20.53■□□□□ 0.88
PTPN18-203ENST00000409022 RSAD1Q9HA92 442 aa20.53■□□□□ 0.88
PTPN18-203ENST00000409022 HCSTQ9UBK5 93 aa20.53■□□□□ 0.88
PTPN18-203ENST00000409022 INPP5FQ9Y2H2 1132 aa20.53■□□□□ 0.88
PTPN18-203ENST00000409022 PCDHB6Q9Y5E3 794 aa20.53■□□□□ 0.88
PTPN18-203ENST00000409022 GRXCR2A6NFK2 248 aa20.52■□□□□ 0.88
PTPN18-203ENST00000409022 LRRIQ4A6NIV6 560 aa20.52■□□□□ 0.88
PTPN18-203ENST00000409022 TSPAN1O60635 241 aa20.52■□□□□ 0.88
PTPN18-203ENST00000409022 ITGA4P13612 1032 aa20.52■□□□□ 0.88
PTPN18-203ENST00000409022 CYP11B2P19099 503 aa20.52■□□□□ 0.88
PTPN18-203ENST00000409022 HOXA11P31270 313 aaPredicted RBP20.52■□□□□ 0.88
PTPN18-203ENST00000409022 TOB1P50616 345 aaPredicted RBP20.52■□□□□ 0.88
PTPN18-203ENST00000409022 ADAM15Q13444 863 aa20.52■□□□□ 0.88
PTPN18-203ENST00000409022 NBR1Q14596 966 aa20.52■□□□□ 0.88
PTPN18-203ENST00000409022 LARP1BQ659C4 914 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms