RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 DHX9Q08211 1270 aaKnown RBP21.48■■□□□ 1.03
CCDC47-202ENST00000403162 RRP1BQ14684 758 aaKnown RBP21.48■■□□□ 1.03
CCDC47-202ENST00000403162 ABCB5Q2M3G0 1257 aa21.48■■□□□ 1.03
CCDC47-202ENST00000403162 EAPPQ56P03 285 aaPredicted RBP21.48■■□□□ 1.03
CCDC47-202ENST00000403162 KCTD17Q8N5Z5 321 aa21.48■■□□□ 1.03
CCDC47-202ENST00000403162 P2RX7Q99572 595 aaKnown RBP21.48■■□□□ 1.03
CCDC47-202ENST00000403162 NCAPGQ9BPX3 1015 aa21.48■■□□□ 1.03
CCDC47-202ENST00000403162 CELF4Q9BZC1 486 aaKnown RBP21.48■■□□□ 1.03
CCDC47-202ENST00000403162 RAB17Q9H0T7 212 aa21.48■■□□□ 1.03
CCDC47-202ENST00000403162 GEMIN8Q9NWZ8 242 aaKnown RBP21.48■■□□□ 1.03
CCDC47-202ENST00000403162 DDX3YO15523 660 aaKnown RBP21.47■■□□□ 1.03
CCDC47-202ENST00000403162 BUB1BO60566 1050 aaPredicted RBP21.47■■□□□ 1.03
CCDC47-202ENST00000403162 GCNT3O95395 438 aa21.47■■□□□ 1.03
CCDC47-202ENST00000403162 GAP43P17677 238 aa21.47■■□□□ 1.03
CCDC47-202ENST00000403162 ATP8B4Q8TF62 1192 aa21.47■■□□□ 1.03
CCDC47-202ENST00000403162 POLR3CQ9BUI4 534 aaPredicted RBP21.47■■□□□ 1.03
CCDC47-202ENST00000403162 EIF3DO15371 548 aaKnown RBP eCLIP21.47■■□□□ 1.03
CCDC47-202ENST00000403162 TGFB1I1O43294 461 aa21.47■■□□□ 1.03
CCDC47-202ENST00000403162 RASSF9O75901 435 aa21.47■■□□□ 1.03
CCDC47-202ENST00000403162 EYA4O95677 639 aa21.47■■□□□ 1.03
CCDC47-202ENST00000403162 FGGP02679 453 aa21.47■■□□□ 1.03
CCDC47-202ENST00000403162 SREBF1P36956 1147 aa21.47■■□□□ 1.03
CCDC47-202ENST00000403162 IRX3P78415 501 aaPredicted RBP21.47■■□□□ 1.03
CCDC47-202ENST00000403162 KRT71Q3SY84 523 aa21.47■■□□□ 1.03
CCDC47-202ENST00000403162 SLC35G2Q8TBE7 412 aa21.47■■□□□ 1.03
CCDC47-202ENST00000403162 RAPGEF5Q92565 580 aa21.47■■□□□ 1.03
CCDC47-202ENST00000403162 MKL1Q969V6 931 aa21.47■■□□□ 1.03
CCDC47-202ENST00000403162 TLCD1Q96CP7 247 aa21.47■■□□□ 1.03
CCDC47-202ENST00000403162 SYT11Q9BT88 431 aa21.47■■□□□ 1.03
CCDC47-202ENST00000403162 RUSC1Q9BVN2 902 aa21.47■■□□□ 1.03
CCDC47-202ENST00000403162 STK33Q9BYT3 514 aa21.47■■□□□ 1.03
CCDC47-202ENST00000403162 CNOT10Q9H9A5 744 aaKnown RBP21.47■■□□□ 1.03
CCDC47-202ENST00000403162 PPP2R3BQ9Y5P8 575 aa21.47■■□□□ 1.03
CCDC47-202ENST00000403162 CLIC2O15247 247 aa21.46■■□□□ 1.03
CCDC47-202ENST00000403162 GH2P01242 217 aa21.46■■□□□ 1.03
CCDC47-202ENST00000403162 MAGOHP61326 146 aaKnown RBP21.46■■□□□ 1.03
CCDC47-202ENST00000403162 SULF1Q8IWU6 871 aa21.46■■□□□ 1.03
CCDC47-202ENST00000403162 MAGOHBQ96A72 148 aaKnown RBP21.46■■□□□ 1.03
CCDC47-202ENST00000403162 NAP1L3Q99457 506 aaPredicted RBP21.46■■□□□ 1.03
CCDC47-202ENST00000403162 FMO2Q99518 471 aa21.46■■□□□ 1.03
CCDC47-202ENST00000403162 CARD9Q9H257 536 aa21.46■■□□□ 1.03
CCDC47-202ENST00000403162 BHMT2Q9H2M3 363 aa21.46■■□□□ 1.03
CCDC47-202ENST00000403162 DPH5Q9H2P9 285 aa21.46■■□□□ 1.03
CCDC47-202ENST00000403162 OSGEPQ9NPF4 335 aa21.46■■□□□ 1.03
CCDC47-202ENST00000403162 VAV3Q9UKW4 847 aa21.46■■□□□ 1.03
CCDC47-202ENST00000403162 PCDHB13Q9Y5F0 798 aa21.46■■□□□ 1.03
CCDC47-202ENST00000403162 FOSP01100 380 aaPredicted RBP21.46■■□□□ 1.03
CCDC47-202ENST00000403162 PSMC2P35998 433 aaKnown RBP21.46■■□□□ 1.03
CCDC47-202ENST00000403162 MAP3K10Q02779 954 aa21.46■■□□□ 1.03
CCDC47-202ENST00000403162 QPCTQ16769 361 aa21.46■■□□□ 1.03
CCDC47-202ENST00000403162 TMEM179Q6ZVK1 233 aa21.46■■□□□ 1.03
CCDC47-202ENST00000403162 FMNL3Q8IVF7 1028 aa21.46■■□□□ 1.03
CCDC47-202ENST00000403162 FAM186BQ8IYM0 893 aa21.46■■□□□ 1.03
CCDC47-202ENST00000403162 TATDN2Q93075 761 aa21.46■■□□□ 1.03
CCDC47-202ENST00000403162 SEC16BQ96JE7 1060 aa21.46■■□□□ 1.03
CCDC47-202ENST00000403162 MKNK1Q9BUB5 465 aa21.46■■□□□ 1.03
CCDC47-202ENST00000403162 RABGAP1Q9Y3P9 1069 aa21.46■■□□□ 1.03
CCDC47-202ENST00000403162 ZMYM2Q9UBW7 1377 aa21.45■■□□□ 1.03
CCDC47-202ENST00000403162 SCN4AP35499 1836 aa21.45■■□□□ 1.02
CCDC47-202ENST00000403162 FAM86B1E9PN63 330 aa21.45■■□□□ 1.02
CCDC47-202ENST00000403162 PPP1R12BO60237 982 aaPredicted RBP21.45■■□□□ 1.02
CCDC47-202ENST00000403162 FAM86B2P0C5J1 330 aa21.45■■□□□ 1.02
CCDC47-202ENST00000403162 CIITAP33076 1130 aa21.45■■□□□ 1.02
CCDC47-202ENST00000403162 JAG1P78504 1218 aa21.45■■□□□ 1.02
CCDC47-202ENST00000403162 KCNA1Q09470 495 aa21.45■■□□□ 1.02
CCDC47-202ENST00000403162 PLS1Q14651 629 aa21.45■■□□□ 1.02
CCDC47-202ENST00000403162 CLUL1Q15846 466 aa21.45■■□□□ 1.02
CCDC47-202ENST00000403162 DCAF12L1Q5VU92 463 aa21.45■■□□□ 1.02
CCDC47-202ENST00000403162 GLYCTKQ8IVS8 523 aa21.45■■□□□ 1.02
CCDC47-202ENST00000403162 PPP1R9AQ9ULJ8 1098 aa21.45■■□□□ 1.02
CCDC47-202ENST00000403162 WDR90Q96KV7 1748 aa21.45■■□□□ 1.02
CCDC47-202ENST00000403162 DCDC2CA8MYV0 355 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 GSCP56915 257 aaPredicted RBP21.44■■□□□ 1.02
CCDC47-202ENST00000403162 DUPD1Q68J44 220 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 CTNNBL1Q8WYA6 563 aaPredicted RBP21.44■■□□□ 1.02
CCDC47-202ENST00000403162 P3H4Q92791 437 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 CENPTQ96BT3 561 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 TRIM51Q9BSJ1 452 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 KLC4Q9NSK0 619 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 NYAP2Q9P242 653 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 DAAM1Q9Y4D1 1078 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 POLR2AP24928 1970 aaKnown RBP21.44■■□□□ 1.02
CCDC47-202ENST00000403162 FRMPD4Q14CM0 1322 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 FAM187AA6NFU0 413 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 ADM5C9JUS6 153 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 CDR1P51861 262 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 DCAF15Q66K64 600 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 SLFN13Q68D06 897 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 PNMA8AQ86V59 439 aaPredicted RBP21.44■■□□□ 1.02
CCDC47-202ENST00000403162 HOOK3Q86VS8 718 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 CACNA2D3Q8IZS8 1091 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 ZC3H15Q8WU90 426 aaKnown RBP21.44■■□□□ 1.02
CCDC47-202ENST00000403162 HOOK2Q96ED9 719 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 ERP44Q9BS26 406 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 AMNQ9BXJ7 453 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 OSBPL7Q9BZF2 842 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 ZDHHC18Q9NUE0 388 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 NR2E1Q9Y466 385 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 IGSF9BQ9UPX0 1349 aa21.44■■□□□ 1.02
CCDC47-202ENST00000403162 GOLGA6L7A0A1B0GV03 622 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms