RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 CTNNAL1Q9UBT7 734 aa18.4■□□□□ 0.54
PTPRA-205ENST00000399903 PPFIA2O75334 1257 aa18.39■□□□□ 0.54
PTPRA-205ENST00000399903 CLSTN1O94985 981 aa18.39■□□□□ 0.54
PTPRA-205ENST00000399903 TARSP26639 723 aaKnown RBP18.39■□□□□ 0.54
PTPRA-205ENST00000399903 STX2P32856 288 aa18.39■□□□□ 0.54
PTPRA-205ENST00000399903 CNGA2Q16280 664 aa18.39■□□□□ 0.54
PTPRA-205ENST00000399903 UBE2SQ16763 222 aa18.39■□□□□ 0.54
PTPRA-205ENST00000399903 TMEM266Q2M3C6 531 aa18.39■□□□□ 0.54
PTPRA-205ENST00000399903 C6orf118Q5T5N4 469 aa18.39■□□□□ 0.54
PTPRA-205ENST00000399903 TAOK1Q7L7X3 1001 aa18.39■□□□□ 0.54
PTPRA-205ENST00000399903 SP8Q8IXZ3 490 aa18.39■□□□□ 0.54
PTPRA-205ENST00000399903 ATP8B4Q8TF62 1192 aa18.39■□□□□ 0.54
PTPRA-205ENST00000399903 CRAMP1Q96RY5 1269 aa18.39■□□□□ 0.54
PTPRA-205ENST00000399903 SEC63Q9UGP8 760 aaKnown RBP18.39■□□□□ 0.54
PTPRA-205ENST00000399903 PPP1R9AQ9ULJ8 1098 aa18.39■□□□□ 0.54
PTPRA-205ENST00000399903 SBF2Q86WG5 1849 aa18.39■□□□□ 0.54
PTPRA-205ENST00000399903 SSR1P43307 286 aaKnown RBP18.39■□□□□ 0.53
PTPRA-205ENST00000399903 COASYQ13057 564 aa18.39■□□□□ 0.53
PTPRA-205ENST00000399903 MUM1Q2TAK8 710 aa18.39■□□□□ 0.53
PTPRA-205ENST00000399903 JAMLQ86YT9 394 aa18.39■□□□□ 0.53
PTPRA-205ENST00000399903 CENPTQ96BT3 561 aa18.39■□□□□ 0.53
PTPRA-205ENST00000399903 RPS6KC1Q96S38 1066 aa18.39■□□□□ 0.53
PTPRA-205ENST00000399903 PDGFDQ9GZP0 370 aaPredicted RBP18.39■□□□□ 0.53
PTPRA-205ENST00000399903 MAGEF1Q9HAY2 307 aa18.39■□□□□ 0.53
PTPRA-205ENST00000399903 BMP2KQ9NSY1 1161 aaPredicted RBP18.39■□□□□ 0.53
PTPRA-205ENST00000399903 MTRF1LQ9UGC7 380 aaKnown RBP18.39■□□□□ 0.53
PTPRA-205ENST00000399903 A0A1B0GVG6 124 aa18.39■□□□□ 0.53
PTPRA-205ENST00000399903 TDP2O95551 362 aa18.39■□□□□ 0.53
PTPRA-205ENST00000399903 RFC5P40937 340 aa18.39■□□□□ 0.53
PTPRA-205ENST00000399903 RPS6KA3P51812 740 aa18.39■□□□□ 0.53
PTPRA-205ENST00000399903 KIAA1755Q5JYT7 1200 aa18.39■□□□□ 0.53
PTPRA-205ENST00000399903 RNF220Q5VTB9 566 aa18.39■□□□□ 0.53
PTPRA-205ENST00000399903 CDC42EP5Q6NZY7 148 aa18.39■□□□□ 0.53
PTPRA-205ENST00000399903 NUDCD1Q96RS6 583 aa18.39■□□□□ 0.53
PTPRA-205ENST00000399903 KCNJ1P48048 391 aa18.38■□□□□ 0.53
PTPRA-205ENST00000399903 TNNI2P48788 182 aa18.38■□□□□ 0.53
PTPRA-205ENST00000399903 CCDC6Q16204 474 aa18.38■□□□□ 0.53
PTPRA-205ENST00000399903 GLYCTKQ8IVS8 523 aa18.38■□□□□ 0.53
PTPRA-205ENST00000399903 LRRC57Q8N9N7 239 aa18.38■□□□□ 0.53
PTPRA-205ENST00000399903 TRIM4Q9C037 500 aa18.38■□□□□ 0.53
PTPRA-205ENST00000399903 KIAA1551Q9HCM1 1747 aa18.38■□□□□ 0.53
PTPRA-205ENST00000399903 HAO1Q9UJM8 370 aa18.38■□□□□ 0.53
PTPRA-205ENST00000399903 C2CD2Q9Y426 696 aa18.38■□□□□ 0.53
PTPRA-205ENST00000399903 NR2F2P24468 414 aa18.38■□□□□ 0.53
PTPRA-205ENST00000399903 VPS41P49754 854 aa18.38■□□□□ 0.53
PTPRA-205ENST00000399903 NBPF20Q3BBV1 942 aa18.38■□□□□ 0.53
PTPRA-205ENST00000399903 CCDC105Q8IYK2 499 aa18.38■□□□□ 0.53
PTPRA-205ENST00000399903 PNMA5Q96PV4 448 aa18.38■□□□□ 0.53
PTPRA-205ENST00000399903 TGS1Q96RS0 853 aaKnown RBP18.38■□□□□ 0.53
PTPRA-205ENST00000399903 SCAF8Q9UPN6 1271 aaKnown RBP18.38■□□□□ 0.53
PTPRA-205ENST00000399903 UCHL3P15374 230 aa18.38■□□□□ 0.53
PTPRA-205ENST00000399903 GALCP54803 685 aa18.38■□□□□ 0.53
PTPRA-205ENST00000399903 MRRFQ96E11 262 aaKnown RBP18.38■□□□□ 0.53
PTPRA-205ENST00000399903 EDEM3Q9BZQ6 932 aa18.38■□□□□ 0.53
PTPRA-205ENST00000399903 HDAC9Q9UKV0 1011 aa18.38■□□□□ 0.53
PTPRA-205ENST00000399903 GNAQP50148 359 aa18.37■□□□□ 0.53
PTPRA-205ENST00000399903 EXOC3L4Q17RC7 722 aa18.37■□□□□ 0.53
PTPRA-205ENST00000399903 NT5DC3Q86UY8 548 aa18.37■□□□□ 0.53
PTPRA-205ENST00000399903 ADAM33Q9BZ11 813 aa18.37■□□□□ 0.53
PTPRA-205ENST00000399903 ZNF287Q9HBT7 754 aa18.37■□□□□ 0.53
PTPRA-205ENST00000399903 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.37■□□□□ 0.532e-6■■■■■ 71
PTPRA-205ENST00000399903 RASAL2Q9UJF2 1139 aa18.37■□□□□ 0.53
PTPRA-205ENST00000399903 MYH4Q9Y623 1939 aa18.37■□□□□ 0.53
PTPRA-205ENST00000399903 LY75O60449 1722 aa18.37■□□□□ 0.53
PTPRA-205ENST00000399903 AGTP01019 485 aa18.37■□□□□ 0.53
PTPRA-205ENST00000399903 PYGLP06737 847 aa18.37■□□□□ 0.53
PTPRA-205ENST00000399903 ZNF131P52739 623 aa18.37■□□□□ 0.53
PTPRA-205ENST00000399903 ANO7Q6IWH7 933 aa18.37■□□□□ 0.53
PTPRA-205ENST00000399903 CNKSR1Q969H4 720 aa18.37■□□□□ 0.53
PTPRA-205ENST00000399903 EPB41L4BQ9H329 900 aa18.37■□□□□ 0.53
PTPRA-205ENST00000399903 BCS1LQ9Y276 419 aa18.37■□□□□ 0.53
PTPRA-205ENST00000399903 ARL2BPQ9Y2Y0 163 aa18.37■□□□□ 0.53
PTPRA-205ENST00000399903 BNIP1Q12981 228 aa18.36■□□□□ 0.53
PTPRA-205ENST00000399903 C15orf52Q6ZUT6 534 aaKnown RBP18.36■□□□□ 0.53
PTPRA-205ENST00000399903 EXOC3L1Q86VI1 746 aa18.36■□□□□ 0.53
PTPRA-205ENST00000399903 NLGN1Q8N2Q7 840 aa18.36■□□□□ 0.53
PTPRA-205ENST00000399903 SYT15Q9BQS2 421 aa18.36■□□□□ 0.53
PTPRA-205ENST00000399903 TMX4Q9H1E5 349 aaPredicted RBP18.36■□□□□ 0.53
PTPRA-205ENST00000399903 C6orf50Q9HD87 102 aa18.36■□□□□ 0.53
PTPRA-205ENST00000399903 RIC8AQ9NPQ8 531 aa18.36■□□□□ 0.53
PTPRA-205ENST00000399903 MTMR4Q9NYA4 1195 aa18.36■□□□□ 0.53
PTPRA-205ENST00000399903 SERPINB13Q9UIV8 391 aa18.36■□□□□ 0.53
PTPRA-205ENST00000399903 E9PMD0 336 aa18.36■□□□□ 0.53
PTPRA-205ENST00000399903 LAD1O00515 517 aa18.36■□□□□ 0.53
PTPRA-205ENST00000399903 CETN3O15182 167 aa18.36■□□□□ 0.53
PTPRA-205ENST00000399903 GDF11O95390 407 aa18.36■□□□□ 0.53
PTPRA-205ENST00000399903 LAMB3Q13751 1172 aa18.36■□□□□ 0.53
PTPRA-205ENST00000399903 SEPT2Q15019 361 aa18.36■□□□□ 0.53
PTPRA-205ENST00000399903 SLC35G2Q8TBE7 412 aa18.36■□□□□ 0.53
PTPRA-205ENST00000399903 ERP27Q96DN0 273 aa18.36■□□□□ 0.53
PTPRA-205ENST00000399903 COA1Q9GZY4 146 aa18.36■□□□□ 0.53
PTPRA-205ENST00000399903 ARMCX3Q9UH62 379 aaPredicted RBP18.36■□□□□ 0.53
PTPRA-205ENST00000399903 GAKO14976 1311 aa18.36■□□□□ 0.53
PTPRA-205ENST00000399903 SLC37A4O43826 429 aa18.36■□□□□ 0.53
PTPRA-205ENST00000399903 RPL21P46778 160 aaKnown RBP18.36■□□□□ 0.53
PTPRA-205ENST00000399903 TRAF1Q13077 416 aa18.36■□□□□ 0.53
PTPRA-205ENST00000399903 AUHQ13825 339 aaKnown RBP18.36■□□□□ 0.53
PTPRA-205ENST00000399903 TRIP13Q15645 432 aaPredicted RBP18.36■□□□□ 0.53
PTPRA-205ENST00000399903 PPP1R15BQ5SWA1 713 aa18.36■□□□□ 0.53
PTPRA-205ENST00000399903 KRT25Q7Z3Z0 450 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms