RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 PPP2R2AP63151 447 aa21.13■□□□□ 0.97
COL13A1-205ENST00000398978 MESDQ14696 234 aa21.13■□□□□ 0.97
COL13A1-205ENST00000398978 GMCL1P1Q8NEA9 526 aa21.13■□□□□ 0.97
COL13A1-205ENST00000398978 SLITRK6Q9H5Y7 841 aa21.13■□□□□ 0.97
COL13A1-205ENST00000398978 PTPN22Q9Y2R2 807 aa21.13■□□□□ 0.97
COL13A1-205ENST00000398978 MNAT1P51948 309 aa21.13■□□□□ 0.97
COL13A1-205ENST00000398978 PPP3CAQ08209 521 aa21.13■□□□□ 0.97
COL13A1-205ENST00000398978 ZDHHC14Q8IZN3 488 aa21.13■□□□□ 0.97
COL13A1-205ENST00000398978 DAW1Q8N136 415 aa21.13■□□□□ 0.97
COL13A1-205ENST00000398978 FBXO25Q8TCJ0 367 aa21.13■□□□□ 0.97
COL13A1-205ENST00000398978 GTPBP10A4D1E9 387 aaKnown RBP21.13■□□□□ 0.97
COL13A1-205ENST00000398978 GMNCA6NCL1 334 aa21.13■□□□□ 0.97
COL13A1-205ENST00000398978 FNTAP49354 379 aa21.13■□□□□ 0.97
COL13A1-205ENST00000398978 BFSP1Q12934 665 aa21.13■□□□□ 0.97
COL13A1-205ENST00000398978 IDI2Q9BXS1 227 aa21.13■□□□□ 0.97
COL13A1-205ENST00000398978 DAAM1Q9Y4D1 1078 aa21.13■□□□□ 0.97
COL13A1-205ENST00000398978 MMP14P50281 582 aa21.12■□□□□ 0.97
COL13A1-205ENST00000398978 COL23A1Q86Y22 540 aaPredicted RBP21.12■□□□□ 0.97
COL13A1-205ENST00000398978 SYT11Q9BT88 431 aa21.12■□□□□ 0.97
COL13A1-205ENST00000398978 GLIS2Q9BZE0 524 aaPredicted RBP21.12■□□□□ 0.97
COL13A1-205ENST00000398978 ARHGEF35A5YM69 484 aa21.12■□□□□ 0.97
COL13A1-205ENST00000398978 BHMG1C9JSJ3 638 aaPredicted RBP21.12■□□□□ 0.97
COL13A1-205ENST00000398978 EIF3DO15371 548 aaKnown RBP eCLIP21.12■□□□□ 0.97
COL13A1-205ENST00000398978 POLR2MP0CAP2 368 aa21.12■□□□□ 0.97
COL13A1-205ENST00000398978 KCNJ1P48048 391 aa21.12■□□□□ 0.97
COL13A1-205ENST00000398978 NSMFQ6X4W1 530 aa21.12■□□□□ 0.97
COL13A1-205ENST00000398978 RUFY4Q6ZNE9 571 aa21.12■□□□□ 0.97
COL13A1-205ENST00000398978 MIGA2Q7L4E1 593 aa21.12■□□□□ 0.97
COL13A1-205ENST00000398978 PODNQ7Z5L7 613 aa21.12■□□□□ 0.97
COL13A1-205ENST00000398978 RPUSD2Q8IZ73 545 aaKnown RBP21.12■□□□□ 0.97
COL13A1-205ENST00000398978 AGPAT1Q99943 283 aa21.12■□□□□ 0.97
COL13A1-205ENST00000398978 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.12■□□□□ 0.97
COL13A1-205ENST00000398978 NBPF9Q3BBW0 867 aa21.11■□□□□ 0.97
COL13A1-205ENST00000398978 PHLDB2Q86SQ0 1253 aa21.11■□□□□ 0.97
COL13A1-205ENST00000398978 SELENOSQ9BQE4 189 aa21.11■□□□□ 0.97
COL13A1-205ENST00000398978 A6NNZ2 444 aa21.11■□□□□ 0.97
COL13A1-205ENST00000398978 CYP3A4P08684 503 aa21.11■□□□□ 0.97
COL13A1-205ENST00000398978 TUBB8Q3ZCM7 444 aa21.11■□□□□ 0.97
COL13A1-205ENST00000398978 CEP55Q53EZ4 464 aa21.11■□□□□ 0.97
COL13A1-205ENST00000398978 JAMLQ86YT9 394 aa21.11■□□□□ 0.97
COL13A1-205ENST00000398978 TUFT1Q9NNX1 390 aa21.11■□□□□ 0.97
COL13A1-205ENST00000398978 ANKRD31Q8N7Z5 1873 aa21.11■□□□□ 0.97
COL13A1-205ENST00000398978 SLC26A4O43511 780 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 PTENP60484 403 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 GRIPAP1Q4V328 841 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 EMC10Q5UCC4 262 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 ARFGAP2Q8N6H7 521 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 POP1Q99575 1024 aaKnown RBP21.1■□□□□ 0.97
COL13A1-205ENST00000398978 GPRC5CQ9NQ84 441 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 FAM114A2Q9NRY5 505 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 INTUQ9ULD6 942 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 NCANO14594 1321 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 TRAPPC3O43617 180 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 SGPL1O95470 568 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 FGFR4P22455 802 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 CHRNA5P30532 468 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 ALDH1B1P30837 517 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 LMO3Q8TAP4 145 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 SLC5A5Q92911 643 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 PCDHB18PQ96TA0 734 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 ERP44Q9BS26 406 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 EPB41L4BQ9H329 900 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 AFF2P51816 1311 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 KIF13BQ9NQT8 1826 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 ANKRD63C9JTQ0 380 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 NPEPPSP55786 919 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 IFI35P80217 286 aaPredicted RBP21.1■□□□□ 0.97
COL13A1-205ENST00000398978 MAPK7Q13164 816 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 TTC27Q6P3X3 843 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 PLEKHO2Q8TD55 490 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 RNF25Q96BH1 459 aaPredicted RBP21.1■□□□□ 0.97
COL13A1-205ENST00000398978 NACC1Q96RE7 527 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 DMAC2Q9NW81 257 aa21.1■□□□□ 0.97
COL13A1-205ENST00000398978 FRMPD4Q14CM0 1322 aa21.09■□□□□ 0.97
COL13A1-205ENST00000398978 IPO5O00410 1097 aaKnown RBP21.09■□□□□ 0.97
COL13A1-205ENST00000398978 MTMR3Q13615 1198 aa21.09■□□□□ 0.97
COL13A1-205ENST00000398978 CCDC38Q502W7 563 aa21.09■□□□□ 0.97
COL13A1-205ENST00000398978 SEMA4AQ9H3S1 761 aa21.09■□□□□ 0.97
COL13A1-205ENST00000398978 ANKRD62A6NC57 917 aa21.09■□□□□ 0.97
COL13A1-205ENST00000398978 PPP2R5CQ13362 524 aa21.09■□□□□ 0.97
COL13A1-205ENST00000398978 DUPD1Q68J44 220 aa21.09■□□□□ 0.97
COL13A1-205ENST00000398978 PADI6Q6TGC4 694 aa21.09■□□□□ 0.97
COL13A1-205ENST00000398978 CCDC25Q86WR0 208 aa21.09■□□□□ 0.97
COL13A1-205ENST00000398978 PSMD1Q99460 953 aa21.09■□□□□ 0.97
COL13A1-205ENST00000398978 CCDC113Q9H0I3 377 aa21.09■□□□□ 0.97
COL13A1-205ENST00000398978 LRRC37AA6NMS7 1700 aa21.09■□□□□ 0.97
COL13A1-205ENST00000398978 VCAM1P19320 739 aa21.08■□□□□ 0.97
COL13A1-205ENST00000398978 COMTP21964 271 aa21.08■□□□□ 0.97
COL13A1-205ENST00000398978 BIRC3Q13489 604 aa21.08■□□□□ 0.97
COL13A1-205ENST00000398978 SLC29A2Q14542 456 aa21.08■□□□□ 0.97
COL13A1-205ENST00000398978 STRIP1Q5VSL9 837 aa21.08■□□□□ 0.97
COL13A1-205ENST00000398978 MICALCLQ6ZW33 695 aa21.08■□□□□ 0.97
COL13A1-205ENST00000398978 CCDC13Q8IYE1 715 aa21.08■□□□□ 0.97
COL13A1-205ENST00000398978 IL31RAQ8NI17 732 aa21.08■□□□□ 0.97
COL13A1-205ENST00000398978 CCDC127Q96BQ5 260 aa21.08■□□□□ 0.97
COL13A1-205ENST00000398978 SEC16BQ96JE7 1060 aa21.08■□□□□ 0.97
COL13A1-205ENST00000398978 CABS1Q96KC9 395 aa21.08■□□□□ 0.97
COL13A1-205ENST00000398978 OSBPL7Q9BZF2 842 aa21.08■□□□□ 0.97
COL13A1-205ENST00000398978 WDR11Q9BZH6 1224 aa21.08■□□□□ 0.97
COL13A1-205ENST00000398978 AZI2Q9H6S1 392 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms