RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 PHKA2P46019 1235 aa16.05■□□□□ 0.16
COL13A1-204ENST00000398975 POU5F1BQ06416 359 aa16.05■□□□□ 0.16
COL13A1-204ENST00000398975 PKP1Q13835 747 aa16.05■□□□□ 0.16
COL13A1-204ENST00000398975 LONRF3Q496Y0 759 aa16.05■□□□□ 0.16
COL13A1-204ENST00000398975 TMEM119Q4V9L6 283 aa16.05■□□□□ 0.16
COL13A1-204ENST00000398975 USP49Q70CQ1 688 aa16.05■□□□□ 0.16
COL13A1-204ENST00000398975 DAW1Q8N136 415 aa16.05■□□□□ 0.16
COL13A1-204ENST00000398975 MCPH1Q8NEM0 835 aa16.05■□□□□ 0.16
COL13A1-204ENST00000398975 LPPQ93052 612 aa16.05■□□□□ 0.16
COL13A1-204ENST00000398975 USP28Q96RU2 1077 aa16.05■□□□□ 0.16
COL13A1-204ENST00000398975 TRAIPQ9BWF2 469 aa16.05■□□□□ 0.16
COL13A1-204ENST00000398975 INO80BQ9C086 356 aaPredicted RBP16.05■□□□□ 0.16
COL13A1-204ENST00000398975 PLXNA4Q9HCM2 1894 aa16.05■□□□□ 0.16
COL13A1-204ENST00000398975 MYO7AQ13402 2215 aa16.04■□□□□ 0.16
COL13A1-204ENST00000398975 C5orf67F2Z3F1 127 aa16.04■□□□□ 0.16
COL13A1-204ENST00000398975 H3BNC9 293 aa16.04■□□□□ 0.16
COL13A1-204ENST00000398975 GRM6O15303 877 aa16.04■□□□□ 0.16
COL13A1-204ENST00000398975 EDN1P05305 212 aa16.04■□□□□ 0.16
COL13A1-204ENST00000398975 MAPK7Q13164 816 aa16.04■□□□□ 0.16
COL13A1-204ENST00000398975 GPM6BQ13491 265 aa16.04■□□□□ 0.16
COL13A1-204ENST00000398975 ZRSR1Q15695 479 aaKnown RBP16.04■□□□□ 0.16
COL13A1-204ENST00000398975 FOXD4L5Q5VV16 416 aaPredicted RBP16.04■□□□□ 0.16
COL13A1-204ENST00000398975 TWF2Q6IBS0 349 aaKnown RBP16.04■□□□□ 0.16
COL13A1-204ENST00000398975 MICALL1Q8N3F8 863 aa16.04■□□□□ 0.16
COL13A1-204ENST00000398975 RNF169Q8NCN4 708 aa16.04■□□□□ 0.16
COL13A1-204ENST00000398975 FOXD4L4Q8WXT5 416 aaPredicted RBP16.04■□□□□ 0.16
COL13A1-204ENST00000398975 CPB2Q96IY4 423 aa16.04■□□□□ 0.16
COL13A1-204ENST00000398975 SAMD11Q96NU1 681 aa16.04■□□□□ 0.16
COL13A1-204ENST00000398975 NFKBIZQ9BYH8 718 aa16.04■□□□□ 0.16
COL13A1-204ENST00000398975 CWH43Q9H720 699 aa16.04■□□□□ 0.16
COL13A1-204ENST00000398975 FBXO2Q9UK22 296 aaPredicted RBP16.04■□□□□ 0.16
COL13A1-204ENST00000398975 USP20Q9Y2K6 914 aa16.04■□□□□ 0.16
COL13A1-204ENST00000398975 INO80B-WBP1J3KQ70 363 aa16.03■□□□□ 0.16
COL13A1-204ENST00000398975 DNAJB1P25685 340 aa16.03■□□□□ 0.16
COL13A1-204ENST00000398975 MARCKSP29966 332 aaPredicted RBP16.03■□□□□ 0.16
COL13A1-204ENST00000398975 CEBPZQ03701 1054 aaKnown RBP16.03■□□□□ 0.16
COL13A1-204ENST00000398975 CAMK1Q14012 370 aa16.03■□□□□ 0.16
COL13A1-204ENST00000398975 TFDP1Q14186 410 aa16.03■□□□□ 0.16
COL13A1-204ENST00000398975 SPECC1Q5M775 1068 aa16.03■□□□□ 0.16
COL13A1-204ENST00000398975 CDCA2Q69YH5 1023 aaPredicted RBP16.03■□□□□ 0.16
COL13A1-204ENST00000398975 C1orf186Q6ZWK4 172 aa16.03■□□□□ 0.16
COL13A1-204ENST00000398975 CABP7Q86V35 215 aa16.03■□□□□ 0.16
COL13A1-204ENST00000398975 HELQQ8TDG4 1101 aa16.03■□□□□ 0.16
COL13A1-204ENST00000398975 KIFC3Q9BVG8 833 aa16.03■□□□□ 0.16
COL13A1-204ENST00000398975 EIF2AQ9BY44 585 aaKnown RBP16.03■□□□□ 0.16
COL13A1-204ENST00000398975 TMEM117Q9H0C3 514 aa16.03■□□□□ 0.16
COL13A1-204ENST00000398975 FAM105AQ9NUU6 356 aa16.03■□□□□ 0.16
COL13A1-204ENST00000398975 TYW1Q9NV66 732 aaKnown RBP16.03■□□□□ 0.16
COL13A1-204ENST00000398975 DACT1Q9NYF0 836 aa16.03■□□□□ 0.16
COL13A1-204ENST00000398975 DNM3Q9UQ16 869 aa16.03■□□□□ 0.16
COL13A1-204ENST00000398975 STK24Q9Y6E0 443 aa16.03■□□□□ 0.16
COL13A1-204ENST00000398975 LRRIQ4A6NIV6 560 aa16.02■□□□□ 0.16
COL13A1-204ENST00000398975 ZNF623O75123 536 aa16.02■□□□□ 0.16
COL13A1-204ENST00000398975 EOMESO95936 686 aa16.02■□□□□ 0.16
COL13A1-204ENST00000398975 BMP15O95972 392 aa16.02■□□□□ 0.16
COL13A1-204ENST00000398975 ARF4P18085 180 aaPredicted RBP16.02■□□□□ 0.16
COL13A1-204ENST00000398975 AFF1P51825 1210 aaKnown RBP16.02■□□□□ 0.16
COL13A1-204ENST00000398975 RINT1Q6NUQ1 792 aa16.02■□□□□ 0.16
COL13A1-204ENST00000398975 AGMOQ6ZNB7 445 aa16.02■□□□□ 0.16
COL13A1-204ENST00000398975 CDR2LQ86X02 465 aaPredicted RBP16.02■□□□□ 0.16
COL13A1-204ENST00000398975 SMG8Q8ND04 991 aaKnown RBP16.02■□□□□ 0.16
COL13A1-204ENST00000398975 EPSTI1Q96J88 318 aa16.02■□□□□ 0.16
COL13A1-204ENST00000398975 AK8Q96MA6 479 aa16.02■□□□□ 0.16
COL13A1-204ENST00000398975 CLIC6Q96NY7 704 aa16.02■□□□□ 0.16
COL13A1-204ENST00000398975 CCDC113Q9H0I3 377 aa16.02■□□□□ 0.16
COL13A1-204ENST00000398975 CSRNP2Q9H175 543 aa16.02■□□□□ 0.16
COL13A1-204ENST00000398975 BLOC1S4Q9NUP1 217 aa16.02■□□□□ 0.16
COL13A1-204ENST00000398975 PCDHB2Q9Y5E7 798 aa16.02■□□□□ 0.16
COL13A1-204ENST00000398975 NPHP3-ACAD11A0A0J9YXS1 232 aa16.01■□□□□ 0.15
COL13A1-204ENST00000398975 GTPBP6O43824 516 aaPredicted RBP16.01■□□□□ 0.15
COL13A1-204ENST00000398975 B4GALT3O60512 393 aa16.01■□□□□ 0.15
COL13A1-204ENST00000398975 HIP1RO75146 1068 aa16.01■□□□□ 0.15
COL13A1-204ENST00000398975 ITGB1P05556 798 aa16.01■□□□□ 0.15
COL13A1-204ENST00000398975 RB1P06400 928 aa16.01■□□□□ 0.15
COL13A1-204ENST00000398975 LONP1P36776 959 aaKnown RBP16.01■□□□□ 0.15
COL13A1-204ENST00000398975 SLC12A3P55017 1021 aa16.01■□□□□ 0.15
COL13A1-204ENST00000398975 KARSQ15046 597 aaKnown RBP16.01■□□□□ 0.15
COL13A1-204ENST00000398975 ARSHQ5FYA8 562 aa16.01■□□□□ 0.15
COL13A1-204ENST00000398975 MRPL10Q7Z7H8 261 aaKnown RBP16.01■□□□□ 0.15
COL13A1-204ENST00000398975 KLHL23Q8NBE8 558 aa16.01■□□□□ 0.15
COL13A1-204ENST00000398975 MRPL38Q96DV4 380 aaKnown RBP16.01■□□□□ 0.15
COL13A1-204ENST00000398975 RNF39Q9H2S5 420 aa16.01■□□□□ 0.15
COL13A1-204ENST00000398975 FZD8Q9H461 694 aa16.01■□□□□ 0.15
COL13A1-204ENST00000398975 ZSCAN16Q9H4T2 348 aaPredicted RBP16.01■□□□□ 0.15
COL13A1-204ENST00000398975 ALG13Q9NP73 1137 aaKnown RBP16.01■□□□□ 0.15
COL13A1-204ENST00000398975 RNF216Q9NWF9 866 aaPredicted RBP16.01■□□□□ 0.15
COL13A1-204ENST00000398975 LMCD1Q9NZU5 365 aa16.01■□□□□ 0.15
COL13A1-204ENST00000398975 PLAGL2Q9UPG8 496 aa16.01■□□□□ 0.15
COL13A1-204ENST00000398975 UNC80Q8N2C7 3258 aa16.01■□□□□ 0.15
COL13A1-204ENST00000398975 BRWD1Q9NSI6 2320 aa16■□□□□ 0.15
COL13A1-204ENST00000398975 ERLIN2O94905 339 aa16■□□□□ 0.15
COL13A1-204ENST00000398975 PLA2G4BP0C869 781 aa16■□□□□ 0.15
COL13A1-204ENST00000398975 ZSCAN22P10073 491 aaPredicted RBP16■□□□□ 0.15
COL13A1-204ENST00000398975 PLCG1P19174 1290 aa16■□□□□ 0.15
COL13A1-204ENST00000398975 PBX3P40426 434 aa16■□□□□ 0.15
COL13A1-204ENST00000398975 NAMPTP43490 491 aa16■□□□□ 0.15
COL13A1-204ENST00000398975 NASPP49321 788 aaPredicted RBP16■□□□□ 0.15
COL13A1-204ENST00000398975 RAD51AP2Q09MP3 1159 aa16■□□□□ 0.15
COL13A1-204ENST00000398975 SLC39A14Q15043 492 aa16■□□□□ 0.15
COL13A1-204ENST00000398975 PHF6Q8IWS0 365 aaKnown RBP eCLIP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms