RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 EXOC4Q96A65 974 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 NR1H4Q96RI1 486 aaPredicted RBP9.97□□□□□ -0.81
ATL3-201ENST00000398868 ACTR5Q9H9F9 607 aaPredicted RBP9.97□□□□□ -0.81
ATL3-201ENST00000398868 CYP4F11Q9HBI6 524 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 ZSWIM6Q9HCJ5 1215 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 BSDC1Q9NW68 430 aaPredicted RBP9.97□□□□□ -0.81
ATL3-201ENST00000398868 HOXC10Q9NYD6 342 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 KLK14Q9P0G3 267 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 KLHL8Q9P2G9 620 aaPredicted RBP9.97□□□□□ -0.81
ATL3-201ENST00000398868 HPCAL4Q9UM19 191 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 RNF123Q5XPI4 1314 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 HUS1O60921 280 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 RBM6P78332 1123 aaKnown RBP9.97□□□□□ -0.81
ATL3-201ENST00000398868 LMNB2Q03252 620 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 OCA2Q04671 838 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 PTPN12Q05209 780 aaKnown RBP9.97□□□□□ -0.81
ATL3-201ENST00000398868 PARP9Q8IXQ6 854 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 TDRD7Q8NHU6 1098 aaKnown RBP9.97□□□□□ -0.81
ATL3-201ENST00000398868 AGAP3Q96P47 875 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 LSG1Q9H089 658 aaKnown RBP9.97□□□□□ -0.81
ATL3-201ENST00000398868 POLR3FQ9H1D9 316 aaPredicted RBP9.97□□□□□ -0.81
ATL3-201ENST00000398868 IGFLR1Q9H665 355 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 KCNH4Q9UQ05 1017 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 MTMR6Q9Y217 621 aa9.97□□□□□ -0.81
ATL3-201ENST00000398868 ATP8B3O60423 1300 aa9.96□□□□□ -0.81
ATL3-201ENST00000398868 ERBB4Q15303 1308 aa9.96□□□□□ -0.81
ATL3-201ENST00000398868 PRRG1O14668 218 aa9.96□□□□□ -0.81
ATL3-201ENST00000398868 MMEP08473 750 aa9.96□□□□□ -0.81
ATL3-201ENST00000398868 CYTH1Q15438 398 aa9.96□□□□□ -0.81
ATL3-201ENST00000398868 ADCK2Q7Z695 626 aa9.96□□□□□ -0.81
ATL3-201ENST00000398868 ASIC4Q96FT7 647 aa9.96□□□□□ -0.81
ATL3-201ENST00000398868 MAPK13O15264 365 aa9.96□□□□□ -0.81
ATL3-201ENST00000398868 TXNP10599 105 aaKnown RBP9.96□□□□□ -0.81
ATL3-201ENST00000398868 VCAM1P19320 739 aa9.96□□□□□ -0.81
ATL3-201ENST00000398868 OR1G1P47890 313 aa9.96□□□□□ -0.81
ATL3-201ENST00000398868 GPC3P51654 580 aa9.96□□□□□ -0.81
ATL3-201ENST00000398868 NEK2P51955 445 aa9.96□□□□□ -0.81
ATL3-201ENST00000398868 STX1BP61266 288 aa9.96□□□□□ -0.81
ATL3-201ENST00000398868 CC2D1AQ6P1N0 951 aaPredicted RBP9.96□□□□□ -0.81
ATL3-201ENST00000398868 PACSIN2Q9UNF0 486 aaPredicted RBP9.96□□□□□ -0.81
ATL3-201ENST00000398868 ADGRL3Q9HAR2 1447 aa9.96□□□□□ -0.81
ATL3-201ENST00000398868 MXI1P50539 228 aa9.96□□□□□ -0.81
ATL3-201ENST00000398868 TBCCQ15814 346 aa9.96□□□□□ -0.81
ATL3-201ENST00000398868 HOXB7P09629 217 aa9.96□□□□□ -0.82
ATL3-201ENST00000398868 ZNF211Q13398 564 aaPredicted RBP9.96□□□□□ -0.82
ATL3-201ENST00000398868 TTLL4Q14679 1199 aa9.96□□□□□ -0.82
ATL3-201ENST00000398868 ANKRD40Q6AI12 368 aa9.96□□□□□ -0.82
ATL3-201ENST00000398868 TBC1D10CQ8IV04 446 aa9.96□□□□□ -0.82
ATL3-201ENST00000398868 DTX3LQ8TDB6 740 aa9.96□□□□□ -0.82
ATL3-201ENST00000398868 CDKL2Q92772 493 aa9.96□□□□□ -0.82
ATL3-201ENST00000398868 PPARGC1AQ9UBK2 798 aaKnown RBP9.96□□□□□ -0.82
ATL3-201ENST00000398868 PSMD14O00487 310 aa9.96□□□□□ -0.82
ATL3-201ENST00000398868 MAPK6Q16659 721 aa9.96□□□□□ -0.82
ATL3-201ENST00000398868 LRRC71Q8N4P6 559 aa9.96□□□□□ -0.82
ATL3-201ENST00000398868 RNF25Q96BH1 459 aaPredicted RBP9.96□□□□□ -0.82
ATL3-201ENST00000398868 MLH1P40692 756 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 ARHGDIAP52565 204 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 CCDC15Q0P6D6 951 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 ORC1Q13415 861 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 LBRQ14739 615 aaKnown RBP9.95□□□□□ -0.82
ATL3-201ENST00000398868 SEZ6Q53EL9 994 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 CCDC51Q96ER9 411 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 ZBED1O96006 694 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 MT-ND3P03897 115 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 FAM180AQ6UWF9 173 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 SH3GL3Q99963 347 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 ING2Q9H160 280 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 DHX36Q9H2U1 1008 aaKnown RBP9.95□□□□□ -0.82
ATL3-201ENST00000398868 RGL1Q9NZL6 768 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 TLK1Q9UKI8 766 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 EXOC1LA0A1B0GW35 172 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 RPS6KA4O75676 772 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 GNAT1P11488 350 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 OCRLQ01968 901 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 PCSK7Q16549 785 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 MFSD4BQ5TF39 518 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 P2RX5Q93086 422 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 IL17RAQ96F46 866 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 PITPNM3Q9BZ71 974 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 ZC3H4Q9UPT8 1303 aaKnown RBP9.95□□□□□ -0.82
ATL3-201ENST00000398868 MED7O43513 233 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 NBNO60934 754 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 FOSP01100 380 aaPredicted RBP9.95□□□□□ -0.82
ATL3-201ENST00000398868 ACOT2P49753 483 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 DRP2Q13474 957 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 UBE3CQ15386 1083 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 RBBP7Q16576 425 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 TOGARAM2Q6ZUX3 1019 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 ARMCX2Q7L311 632 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 SFR1Q86XK3 245 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 ATP11CQ8NB49 1132 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 RNF149Q8NC42 400 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 FBXL13Q8NEE6 735 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 SH2B2O14492 632 aaPredicted RBP9.95□□□□□ -0.82
ATL3-201ENST00000398868 SLC10A5Q5PT55 438 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 TMEM179Q6ZVK1 233 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 RMDN1Q96DB5 314 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 NUDCD1Q96RS6 583 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 FAM118BQ9BPY3 351 aa9.95□□□□□ -0.82
ATL3-201ENST00000398868 TMEM47Q9BQJ4 181 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms