RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 PATL1Q86TB9 770 aaKnown RBP10.39□□□□□ -0.75
CDRT1-204ENST00000395906 NLRP10Q86W26 655 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 VPS37DQ86XT2 251 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 FAM186BQ8IYM0 893 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 ALDH16A1Q8IZ83 802 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 CENPOQ9BU64 300 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 SCHIP1Q9P0W5 487 aaPredicted RBP10.39□□□□□ -0.75
CDRT1-204ENST00000395906 SEC63Q9UGP8 760 aaKnown RBP10.39□□□□□ -0.75
CDRT1-204ENST00000395906 CCPG1Q9ULG6 757 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 NIP7Q9Y221 180 aaKnown RBP eCLIP10.39□□□□□ -0.75
CDRT1-204ENST00000395906 ARFGEF2Q9Y6D5 1785 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.39□□□□□ -0.75
CDRT1-204ENST00000395906 IQCA1LA6NCM1 817 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 SMIM23A6NLE4 172 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 TCP11X1B4DZS4 312 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 FBP2O00757 339 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 ZNF263O14978 683 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 AGTP01019 485 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 COL6A2P12110 1019 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 KCNA2P16389 499 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 RASSF2P50749 326 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 KHDC1Q4VXA5 237 aaKnown RBP10.39□□□□□ -0.75
CDRT1-204ENST00000395906 KLHDC7AQ5VTJ3 777 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 SUSD4Q5VX71 490 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 FAM196AQ6ZSG2 479 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 INTS8Q75QN2 995 aaKnown RBP10.39□□□□□ -0.75
CDRT1-204ENST00000395906 TTC30AQ86WT1 665 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 CROCCP3Q8IVE0 287 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 NELFCDQ8IXH7 590 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 CCDC42Q96M95 316 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 ISCA1Q9BUE6 129 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 GBA3Q9H227 469 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 NEUROG2Q9H2A3 272 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 METTL14Q9HCE5 456 aaKnown RBP10.39□□□□□ -0.75
CDRT1-204ENST00000395906 TRPC7Q9HCX4 862 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 GJB4Q9NTQ9 266 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 ZNF212Q9UDV6 495 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 HBS1LQ9Y450 684 aaKnown RBP10.39□□□□□ -0.75
CDRT1-204ENST00000395906 CCDC169A6NNP5 214 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 LGALS16A8MUM7 142 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 RAB15P59190 212 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 PTPN12Q05209 780 aaKnown RBP10.38□□□□□ -0.75
CDRT1-204ENST00000395906 SEPT7Q16181 437 aaKnown RBP10.38□□□□□ -0.75
CDRT1-204ENST00000395906 LRRC24Q50LG9 513 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 FAM47EQ6ZV65 393 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 C11orf74Q86VG3 221 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 BPHLQ86WA6 291 aaPredicted RBP10.38□□□□□ -0.75
CDRT1-204ENST00000395906 VSIG1Q86XK7 387 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 ANKRD13BQ86YJ7 626 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 KLHL7Q8IXQ5 586 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 PROM2Q8N271 834 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 FBXL16Q8N461 479 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 TRPC4APQ8TEL6 797 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 HSPBAP1Q96EW2 488 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 GSDMAQ96QA5 445 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 LRRC4CQ9HCJ2 640 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 CLIC5Q9NZA1 410 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 RWDD2AQ9UIY3 292 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 NR2E3Q9Y5X4 410 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 GPC6Q9Y625 555 aaPredicted RBP10.38□□□□□ -0.75
CDRT1-204ENST00000395906 UTYO14607 1347 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 UMODL1Q5DID0 1318 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 AFDNP55196 1824 aaKnown RBP10.38□□□□□ -0.75
CDRT1-204ENST00000395906 LAMB4A4D0S4 1761 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 RGS16O15492 202 aaPredicted RBP10.38□□□□□ -0.75
CDRT1-204ENST00000395906 CAMTA2O94983 1202 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 EYA4O95677 639 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 MARK3P27448 753 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 HOXD10P28358 340 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 EPHB2P29323 1055 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 IGHMBP2P38935 993 aaKnown RBP10.38□□□□□ -0.75
CDRT1-204ENST00000395906 SYCP2LQ5T4T6 812 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 ZNF772Q68DY9 489 aaPredicted RBP10.38□□□□□ -0.75
CDRT1-204ENST00000395906 CROCCP2Q86T23 111 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 COL23A1Q86Y22 540 aaPredicted RBP10.38□□□□□ -0.75
CDRT1-204ENST00000395906 TMCO5AQ8N6Q1 288 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 ANKLE1Q8NAG6 615 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 VPS50Q96JG6 964 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 NOX5Q96PH1 765 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 SLC39A3Q9BRY0 314 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 UBAC1Q9BSL1 405 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 NDEL1Q9GZM8 345 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 STMN4Q9H169 189 aaPredicted RBP10.38□□□□□ -0.75
CDRT1-204ENST00000395906 AIPL1Q9NZN9 384 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 TMEM59LQ9UK28 342 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 GIT1Q9Y2X7 761 aa10.38□□□□□ -0.75
CDRT1-204ENST00000395906 CAPN9O14815 690 aa10.37□□□□□ -0.75
CDRT1-204ENST00000395906 PLCG2P16885 1265 aa10.37□□□□□ -0.75
CDRT1-204ENST00000395906 GTF2H1P32780 548 aa10.37□□□□□ -0.75
CDRT1-204ENST00000395906 MKRN3Q13064 507 aaKnown RBP10.37□□□□□ -0.75
CDRT1-204ENST00000395906 PTK7Q13308 1070 aa10.37□□□□□ -0.75
CDRT1-204ENST00000395906 MSLNQ13421 630 aaPredicted RBP10.37□□□□□ -0.75
CDRT1-204ENST00000395906 CERKLQ49MI3 558 aaPredicted RBP10.37□□□□□ -0.75
CDRT1-204ENST00000395906 C4orf50Q6ZRC1 276 aa10.37□□□□□ -0.75
CDRT1-204ENST00000395906 DDX42Q86XP3 938 aaKnown RBP eCLIP10.37□□□□□ -0.75
CDRT1-204ENST00000395906 PASD1Q8IV76 773 aa10.37□□□□□ -0.75
CDRT1-204ENST00000395906 TTC39CQ8N584 583 aa10.37□□□□□ -0.75
CDRT1-204ENST00000395906 ZNF713Q8N859 430 aaPredicted RBP10.37□□□□□ -0.75
CDRT1-204ENST00000395906 ZNF579Q8NAF0 562 aaKnown RBP10.37□□□□□ -0.75
CDRT1-204ENST00000395906 USP38Q8NB14 1042 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms