RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 CCDC38Q502W7 563 aa15.58■□□□□ 0.09
SREBF1-205ENST00000395757 PRPF38AQ8NAV1 312 aaKnown RBP15.58■□□□□ 0.09
SREBF1-205ENST00000395757 TMEM143Q96AN5 459 aa15.58■□□□□ 0.09
SREBF1-205ENST00000395757 CALR3Q96L12 384 aaKnown RBP15.58■□□□□ 0.09
SREBF1-205ENST00000395757 SCLT1Q96NL6 688 aa15.58■□□□□ 0.09
SREBF1-205ENST00000395757 RASSF4Q9H2L5 321 aa15.58■□□□□ 0.09
SREBF1-205ENST00000395757 FBXL5Q9UKA1 691 aa15.58■□□□□ 0.09
SREBF1-205ENST00000395757 PPP1R9AQ9ULJ8 1098 aa15.58■□□□□ 0.09
SREBF1-205ENST00000395757 OPLAHO14841 1288 aa15.58■□□□□ 0.08
SREBF1-205ENST00000395757 ENTPD3O75355 529 aa15.58■□□□□ 0.08
SREBF1-205ENST00000395757 HOXD13P35453 343 aa15.58■□□□□ 0.08
SREBF1-205ENST00000395757 DMP1Q13316 513 aaPredicted RBP15.58■□□□□ 0.08
SREBF1-205ENST00000395757 SLC15A2Q16348 729 aa15.58■□□□□ 0.08
SREBF1-205ENST00000395757 CPNE8Q86YQ8 564 aa15.58■□□□□ 0.08
SREBF1-205ENST00000395757 RNF10Q8N5U6 811 aaKnown RBP15.58■□□□□ 0.08
SREBF1-205ENST00000395757 GANQ9H2C0 597 aa15.58■□□□□ 0.08
SREBF1-205ENST00000395757 HERC5Q9UII4 1024 aaKnown RBP15.58■□□□□ 0.08
SREBF1-205ENST00000395757 TIAM2Q8IVF5 1701 aa15.58■□□□□ 0.08
SREBF1-205ENST00000395757 BFSP1Q12934 665 aa15.58■□□□□ 0.08
SREBF1-205ENST00000395757 FAM182AQ5T1J6 154 aa15.58■□□□□ 0.08
SREBF1-205ENST00000395757 NBPF12Q5TAG4 269 aaPredicted RBP15.58■□□□□ 0.08
SREBF1-205ENST00000395757 GSTA5Q7RTV2 222 aa15.58■□□□□ 0.08
SREBF1-205ENST00000395757 ZNF720Q7Z2F6 126 aa15.58■□□□□ 0.08
SREBF1-205ENST00000395757 ANKRD35Q8N283 1001 aa15.58■□□□□ 0.08
SREBF1-205ENST00000395757 GMCL1Q96IK5 515 aa15.58■□□□□ 0.08
SREBF1-205ENST00000395757 COL20A1Q9P218 1284 aa15.58■□□□□ 0.08
SREBF1-205ENST00000395757 TMX2Q9Y320 296 aa15.58■□□□□ 0.08
SREBF1-205ENST00000395757 CEP83Q9Y592 693 aa15.58■□□□□ 0.08
SREBF1-205ENST00000395757 WNT10BO00744 389 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 CAP2P40123 477 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 NT5C2P49902 561 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 SEL1L2Q5TEA6 688 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 LLGL2Q6P1M3 1020 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 LRRC31Q6UY01 552 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 ARHGEF19Q8IW93 802 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 XXYLT1Q8NBI6 393 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 TPCN2Q8NHX9 752 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 SPIRE2Q8WWL2 714 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 HAUS1Q96CS2 278 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 ACCSQ96QU6 501 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 KCNK9Q9NPC2 374 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 HSPBP1Q9NZL4 362 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 VAV3Q9UKW4 847 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 PITPNM2Q9BZ72 1349 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 LRP5O75197 1615 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 SMCHD1A6NHR9 2005 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 SGPL1O95470 568 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 LIG4P49917 911 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 EPHA7Q15375 998 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 SCARA5Q6ZMJ2 495 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 CPLX4Q7Z7G2 160 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 USP38Q8NB14 1042 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 C1orf54Q8WWF1 131 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 MXRA8Q9BRK3 442 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 A0A1B0GUL6 1792 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 MARCKSL1P49006 195 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 IGBP1P78318 339 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 RNPC3Q96LT9 517 aaKnown RBP15.57■□□□□ 0.08
SREBF1-205ENST00000395757 SH3BP1Q9Y3L3 701 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 NR2E1Q9Y466 385 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 BZW2Q9Y6E2 419 aaKnown RBP15.57■□□□□ 0.08
SREBF1-205ENST00000395757 PLCH1Q4KWH8 1693 aa15.57■□□□□ 0.08
SREBF1-205ENST00000395757 P4HBP07237 508 aaKnown RBP15.56■□□□□ 0.08
SREBF1-205ENST00000395757 LMNB1P20700 586 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 FECHP22830 423 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 IRF2BP2Q7Z5L9 587 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 OTUD6BQ8N6M0 293 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 MKL1Q969V6 931 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 APEX2Q9UBZ4 518 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 TBK1Q9UHD2 729 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 ECM29Q5VYK3 1845 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 CCDC88AQ3V6T2 1871 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 NR1D1P20393 614 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 POLGP54098 1239 aaPredicted RBP15.56■□□□□ 0.08
SREBF1-205ENST00000395757 SPIRE1Q08AE8 756 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 UGCGQ16739 394 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 ANKRD42Q8N9B4 389 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 GOLGA6L7A0A1B0GV03 622 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 KRT19P08727 400 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 ERVK-9P63128 1117 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 PPP3CAQ08209 521 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 TATDN1Q6P1N9 297 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 C1orf186Q6ZWK4 172 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 MICALL2Q8IY33 904 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 SYCE1Q8N0S2 351 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 MMGT1Q8N4V1 131 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 CPA5Q8WXQ8 436 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 DAAM1Q9Y4D1 1078 aa15.56■□□□□ 0.08
SREBF1-205ENST00000395757 ACSL3O95573 720 aa15.55■□□□□ 0.08
SREBF1-205ENST00000395757 SRGAP2CP0DJJ0 459 aa15.55■□□□□ 0.08
SREBF1-205ENST00000395757 MKRN3Q13064 507 aaKnown RBP15.55■□□□□ 0.08
SREBF1-205ENST00000395757 IFT88Q13099 833 aa15.55■□□□□ 0.08
SREBF1-205ENST00000395757 Q4G0T1 1027 aa15.55■□□□□ 0.08
SREBF1-205ENST00000395757 EMBQ6PCB8 327 aa15.55■□□□□ 0.08
SREBF1-205ENST00000395757 IFT74Q96LB3 600 aa15.55■□□□□ 0.08
SREBF1-205ENST00000395757 ZNF408Q9H9D4 720 aa15.55■□□□□ 0.08
SREBF1-205ENST00000395757 IGSF9BQ9UPX0 1349 aa15.55■□□□□ 0.08
SREBF1-205ENST00000395757 F8VZ95 297 aa15.55■□□□□ 0.08
SREBF1-205ENST00000395757 IFNB1P01574 187 aa15.55■□□□□ 0.08
SREBF1-205ENST00000395757 MEI1Q5TIA1 1274 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms