RNA–Protein interactions for RNA: ENST00000393988.2

KRT41P-201, Transcript of keratin 41 pseudogene, humanhuman

BASIC

Gene KRT41P, Length 1,293 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT41P-201ENST00000393988 LXNQ9BS40 222 aa13.41□□□□□ -0.26
KRT41P-201ENST00000393988 PHF7Q9BWX1 381 aaPredicted RBP13.41□□□□□ -0.26
KRT41P-201ENST00000393988 MRPL9Q9BYD2 267 aaKnown RBP13.41□□□□□ -0.26
KRT41P-201ENST00000393988 KCNMB3Q9NPA1 279 aa13.41□□□□□ -0.26
KRT41P-201ENST00000393988 NGRNQ9NPE2 291 aaKnown RBP13.41□□□□□ -0.26
KRT41P-201ENST00000393988 COL4A3BPQ9Y5P4 624 aa13.41□□□□□ -0.26
KRT41P-201ENST00000393988 MUC6Q6W4X9 2439 aa13.41□□□□□ -0.26
KRT41P-201ENST00000393988 STK36Q9NRP7 1315 aa13.4□□□□□ -0.26
KRT41P-201ENST00000393988 LOC730098B7Z3J9 87 aa13.4□□□□□ -0.26
KRT41P-201ENST00000393988 ZBTB39O15060 712 aa13.4□□□□□ -0.26
KRT41P-201ENST00000393988 KRT2P35908 639 aa13.4□□□□□ -0.26
KRT41P-201ENST00000393988 SMC1AQ14683 1233 aaKnown RBP13.4□□□□□ -0.26
KRT41P-201ENST00000393988 ANKRD1Q15327 319 aa13.4□□□□□ -0.26
KRT41P-201ENST00000393988 EPHA7Q15375 998 aa13.4□□□□□ -0.26
KRT41P-201ENST00000393988 XKR9Q5GH70 373 aa13.4□□□□□ -0.26
KRT41P-201ENST00000393988 HERC4Q5GLZ8 1057 aaPredicted RBP13.4□□□□□ -0.26
KRT41P-201ENST00000393988 NOMO2Q5JPE7 1267 aa13.4□□□□□ -0.26
KRT41P-201ENST00000393988 TPH2Q8IWU9 490 aa13.4□□□□□ -0.26
KRT41P-201ENST00000393988 PSPC1Q8WXF1 523 aaKnown RBP13.4□□□□□ -0.26
KRT41P-201ENST00000393988 TMEM169Q96HH4 297 aa13.4□□□□□ -0.26
KRT41P-201ENST00000393988 TSHZ2Q9NRE2 1034 aa13.4□□□□□ -0.26
KRT41P-201ENST00000393988 FAM105AQ9NUU6 356 aa13.4□□□□□ -0.26
KRT41P-201ENST00000393988 CDH22Q9UJ99 828 aa13.4□□□□□ -0.26
KRT41P-201ENST00000393988 FSD2A1L4K1 749 aa13.39□□□□□ -0.27
KRT41P-201ENST00000393988 C2orf71A6NGG8 1288 aa13.39□□□□□ -0.27
KRT41P-201ENST00000393988 LARGE1O95461 756 aa13.39□□□□□ -0.27
KRT41P-201ENST00000393988 SKIP12755 728 aa13.39□□□□□ -0.27
KRT41P-201ENST00000393988 FDPSP14324 419 aaKnown RBP13.39□□□□□ -0.27
KRT41P-201ENST00000393988 YWHABP31946 246 aaKnown RBP13.39□□□□□ -0.27
KRT41P-201ENST00000393988 RFC5P40937 340 aa13.39□□□□□ -0.27
KRT41P-201ENST00000393988 LAMTOR4Q0VGL1 99 aa13.39□□□□□ -0.27
KRT41P-201ENST00000393988 BMS1Q14692 1282 aaKnown RBP13.39□□□□□ -0.27
KRT41P-201ENST00000393988 CBX2Q14781 532 aaPredicted RBP13.39□□□□□ -0.27
KRT41P-201ENST00000393988 ME3Q16798 604 aa13.39□□□□□ -0.27
KRT41P-201ENST00000393988 SYCE2Q6PIF2 218 aa13.39□□□□□ -0.27
KRT41P-201ENST00000393988 OTUD6AQ7L8S5 288 aa13.39□□□□□ -0.27
KRT41P-201ENST00000393988 VPS52Q8N1B4 723 aa13.39□□□□□ -0.27
KRT41P-201ENST00000393988 MRPL43Q8N983 215 aaKnown RBP13.39□□□□□ -0.27
KRT41P-201ENST00000393988 EDAQ92838 391 aa13.39□□□□□ -0.27
KRT41P-201ENST00000393988 NAP1L4Q99733 375 aaKnown RBP13.39□□□□□ -0.27
KRT41P-201ENST00000393988 S1PR5Q9H228 398 aa13.39□□□□□ -0.27
KRT41P-201ENST00000393988 NRDE2Q9H7Z3 1164 aa13.39□□□□□ -0.27
KRT41P-201ENST00000393988 MINDY3Q9H8M7 445 aa13.39□□□□□ -0.27
KRT41P-201ENST00000393988 IFT122Q9HBG6 1241 aa13.39□□□□□ -0.27
KRT41P-201ENST00000393988 BRMS1Q9HCU9 246 aa13.39□□□□□ -0.27
KRT41P-201ENST00000393988 TBC1D13Q9NVG8 400 aa13.39□□□□□ -0.27
KRT41P-201ENST00000393988 ARIH1Q9Y4X5 557 aaPredicted RBP13.39□□□□□ -0.27
KRT41P-201ENST00000393988 PCDHB2Q9Y5E7 798 aa13.39□□□□□ -0.27
KRT41P-201ENST00000393988 A0A087WWV3 80 aa13.38□□□□□ -0.27
KRT41P-201ENST00000393988 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.38□□□□□ -0.27
KRT41P-201ENST00000393988 TBX3O15119 743 aa13.38□□□□□ -0.27
KRT41P-201ENST00000393988 CLASP2O75122 1294 aaKnown RBP13.38□□□□□ -0.27
KRT41P-201ENST00000393988 OFD1O75665 1012 aa13.38□□□□□ -0.27
KRT41P-201ENST00000393988 SSBP05455 408 aaKnown RBP eCLIP13.38□□□□□ -0.27
KRT41P-201ENST00000393988 WEE2P0C1S8 567 aa13.38□□□□□ -0.27
KRT41P-201ENST00000393988 ATP2B1P20020 1258 aa13.38□□□□□ -0.27
KRT41P-201ENST00000393988 NEK4P51957 841 aa13.38□□□□□ -0.27
KRT41P-201ENST00000393988 ANAPC15P60006 121 aa13.38□□□□□ -0.27
KRT41P-201ENST00000393988 EMC2Q15006 297 aa13.38□□□□□ -0.27
KRT41P-201ENST00000393988 TMEM184AQ6ZMB5 413 aa13.38□□□□□ -0.27
KRT41P-201ENST00000393988 ZBTB33Q86T24 672 aa13.38□□□□□ -0.27
KRT41P-201ENST00000393988 TMEM173Q86WV6 379 aaPredicted RBP13.38□□□□□ -0.27
KRT41P-201ENST00000393988 ZNF280BQ86YH2 543 aa13.38□□□□□ -0.27
KRT41P-201ENST00000393988 C4orf19Q8IY42 314 aa13.38□□□□□ -0.27
KRT41P-201ENST00000393988 SLFN12Q8IYM2 578 aa13.38□□□□□ -0.27
KRT41P-201ENST00000393988 C12orf76Q8N812 135 aaPredicted RBP13.38□□□□□ -0.27
KRT41P-201ENST00000393988 RNF149Q8NC42 400 aa13.38□□□□□ -0.27
KRT41P-201ENST00000393988 URGCPQ8TCY9 931 aa13.38□□□□□ -0.27
KRT41P-201ENST00000393988 SUSD6Q92537 303 aa13.38□□□□□ -0.27
KRT41P-201ENST00000393988 PGBD4Q96DM1 585 aa13.38□□□□□ -0.27
KRT41P-201ENST00000393988 MFSD14AQ96MC6 490 aa13.38□□□□□ -0.27
KRT41P-201ENST00000393988 DHX33Q9H6R0 707 aaKnown RBP13.38□□□□□ -0.27
KRT41P-201ENST00000393988 ZSWIM4Q9H7M6 989 aa13.38□□□□□ -0.27
KRT41P-201ENST00000393988 DNAJB4Q9UDY4 337 aa13.38□□□□□ -0.27
KRT41P-201ENST00000393988 TECTAO75443 2155 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 TMEM221A6NGB7 291 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 BTBD18B2RXH4 712 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 M0R296 226 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 JAK2O60674 1132 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 GALTP07902 379 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 TXKP42681 527 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 SLC11A1P49279 550 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 RAB27AP51159 221 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 ZXDAP98168 799 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 KCNC3Q14003 757 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 TRIM29Q14134 588 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 CALCRLQ16602 461 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 TPRNQ4KMQ1 711 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 RARS2Q5T160 578 aaKnown RBP13.37□□□□□ -0.27
KRT41P-201ENST00000393988 CES5AQ6NT32 575 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 KANK3Q6NY19 840 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 TRIM67Q6ZTA4 783 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 SRGAP1Q7Z6B7 1085 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 EXOC8Q8IYI6 725 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 BCL7CQ8WUZ0 217 aaPredicted RBP13.37□□□□□ -0.27
KRT41P-201ENST00000393988 TCP11Q8WWU5 503 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 CASP10Q92851 521 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 GTF3C6Q969F1 213 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 PBXIP1Q96AQ6 731 aa13.37□□□□□ -0.27
KRT41P-201ENST00000393988 IGSF21Q96ID5 467 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms