RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 RIN2Q8WYP3 895 aaPredicted RBP12.46□□□□□ -0.41
TRAF3IP2-208ENST00000392556 CCDC47Q96A33 483 aaKnown RBP12.46□□□□□ -0.41
TRAF3IP2-208ENST00000392556 SPATA33Q96N06 139 aa12.46□□□□□ -0.41
TRAF3IP2-208ENST00000392556 SPZ1Q9BXG8 430 aa12.46□□□□□ -0.41
TRAF3IP2-208ENST00000392556 EBF2Q9HAK2 575 aa12.46□□□□□ -0.41
TRAF3IP2-208ENST00000392556 HDAC6Q9UBN7 1215 aa12.46□□□□□ -0.41
TRAF3IP2-208ENST00000392556 COG5Q9UP83 839 aa12.46□□□□□ -0.41
TRAF3IP2-208ENST00000392556 KIAA1217Q5T5P2 1943 aa12.46□□□□□ -0.41
TRAF3IP2-208ENST00000392556 E7EWF7 191 aa12.46□□□□□ -0.42
TRAF3IP2-208ENST00000392556 PPP1R11O60927 126 aaPredicted RBP12.46□□□□□ -0.42
TRAF3IP2-208ENST00000392556 PPFIA3O75145 1194 aa12.46□□□□□ -0.42
TRAF3IP2-208ENST00000392556 CA3P07451 260 aa12.46□□□□□ -0.42
TRAF3IP2-208ENST00000392556 GNAT1P11488 350 aa12.46□□□□□ -0.42
TRAF3IP2-208ENST00000392556 CKBP12277 381 aa12.46□□□□□ -0.42
TRAF3IP2-208ENST00000392556 ATP1A3P13637 1013 aa12.46□□□□□ -0.42
TRAF3IP2-208ENST00000392556 MYL5Q02045 173 aa12.46□□□□□ -0.42
TRAF3IP2-208ENST00000392556 SNX1Q13596 522 aa12.46□□□□□ -0.42
TRAF3IP2-208ENST00000392556 SETDB1Q15047 1291 aa12.46□□□□□ -0.42
TRAF3IP2-208ENST00000392556 CWF19L1Q69YN2 538 aaKnown RBP12.46□□□□□ -0.42
TRAF3IP2-208ENST00000392556 ADALQ6DHV7 355 aa12.46□□□□□ -0.42
TRAF3IP2-208ENST00000392556 DNAH12Q6ZR08 3092 aa12.46□□□□□ -0.42
TRAF3IP2-208ENST00000392556 MAP4K1Q92918 833 aa12.46□□□□□ -0.42
TRAF3IP2-208ENST00000392556 BRF1Q92994 677 aa12.46□□□□□ -0.42
TRAF3IP2-208ENST00000392556 CUL5Q93034 780 aa12.46□□□□□ -0.42
TRAF3IP2-208ENST00000392556 NAPGQ99747 312 aaPredicted RBP12.46□□□□□ -0.42
TRAF3IP2-208ENST00000392556 NAA15Q9BXJ9 866 aaKnown RBP12.46□□□□□ -0.42
TRAF3IP2-208ENST00000392556 CENPHQ9H3R5 247 aa12.46□□□□□ -0.42
TRAF3IP2-208ENST00000392556 MLXIPQ9HAP2 919 aa12.46□□□□□ -0.42
TRAF3IP2-208ENST00000392556 GOLGA6BA6NDN3 693 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 SMNDC1O75940 238 aaKnown RBP eCLIP12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 CDKL5O76039 1030 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 GGPS1O95749 300 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 CALM1P0DP23 149 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 CALM2P0DP24 149 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 CALM3P0DP25 149 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 IKBKEQ14164 716 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 NOA1Q8NC60 698 aaKnown RBP12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 TMEM87BQ96K49 555 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 INPP4AQ96PE3 977 aaPredicted RBP12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 PANX2Q96RD6 677 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 CTAGE1Q96RT6 745 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 PIGSQ96S52 555 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 MMTAG2Q9BU76 263 aaKnown RBP12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 EPN3Q9H201 632 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 SLC39A2Q9NP94 309 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 TRPC6Q9Y210 931 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 ADGRG1Q9Y653 693 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 H3BQV1 296 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 PIK3CDO00329 1044 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 TLL1O43897 1013 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 MGRN1O60291 552 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 RGS20O76081 388 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 UBA1P22314 1058 aaKnown RBP12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 WDR5P61964 334 aaKnown RBP12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 GOLGA8FQ08AF8 430 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 GOLGA8DPQ0D2H9 430 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 BZW1Q7L1Q6 419 aaKnown RBP12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 TRIM58Q8NG06 486 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 DHX38Q92620 1227 aaKnown RBP12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 RRP36Q96EU6 259 aaKnown RBP12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 CDHR1Q96JP9 859 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 RPGRIP1Q96KN7 1286 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 SENP7Q9BQF6 1050 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 ALG1Q9BT22 464 aa12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 SEC63Q9UGP8 760 aaKnown RBP12.45□□□□□ -0.42
TRAF3IP2-208ENST00000392556 MYH15Q9Y2K3 1946 aa12.44□□□□□ -0.42
TRAF3IP2-208ENST00000392556 HOXC8P31273 242 aa12.44□□□□□ -0.42
TRAF3IP2-208ENST00000392556 AMPD2Q01433 879 aa12.44□□□□□ -0.42
TRAF3IP2-208ENST00000392556 PTH1RQ03431 593 aa12.44□□□□□ -0.42
TRAF3IP2-208ENST00000392556 TRIM71Q2Q1W2 868 aaKnown RBP12.44□□□□□ -0.42
TRAF3IP2-208ENST00000392556 ZNF569Q5MCW4 686 aa12.44□□□□□ -0.42
TRAF3IP2-208ENST00000392556 NAA35Q5VZE5 725 aa12.44□□□□□ -0.42
TRAF3IP2-208ENST00000392556 METTL7BQ6UX53 244 aa12.44□□□□□ -0.42
TRAF3IP2-208ENST00000392556 CRELD2Q6UXH1 353 aaPredicted RBP12.44□□□□□ -0.42
TRAF3IP2-208ENST00000392556 NLRX1Q86UT6 975 aa12.44□□□□□ -0.42
TRAF3IP2-208ENST00000392556 SERINC5Q86VE9 423 aa12.44□□□□□ -0.42
TRAF3IP2-208ENST00000392556 IGDCC4Q8TDY8 1250 aa12.44□□□□□ -0.42
TRAF3IP2-208ENST00000392556 CCDC114Q96M63 670 aa12.44□□□□□ -0.42
TRAF3IP2-208ENST00000392556 SPAG5Q96R06 1193 aa12.44□□□□□ -0.42
TRAF3IP2-208ENST00000392556 RAD9AQ99638 391 aa12.44□□□□□ -0.42
TRAF3IP2-208ENST00000392556 IRX2Q9BZI1 471 aaPredicted RBP12.44□□□□□ -0.42
TRAF3IP2-208ENST00000392556 MYH6P13533 1939 aa12.44□□□□□ -0.42
TRAF3IP2-208ENST00000392556 COL6A3P12111 3177 aa12.43□□□□□ -0.42
TRAF3IP2-208ENST00000392556 C17orf102A2RUQ5 167 aa12.43□□□□□ -0.42
TRAF3IP2-208ENST00000392556 SPATA31C2B4DYI2 1134 aa12.43□□□□□ -0.42
TRAF3IP2-208ENST00000392556 NOP56O00567 594 aaKnown RBP12.43□□□□□ -0.42
TRAF3IP2-208ENST00000392556 LGR5O75473 907 aa12.43□□□□□ -0.42
TRAF3IP2-208ENST00000392556 RPLP2P05387 115 aaKnown RBP12.43□□□□□ -0.42
TRAF3IP2-208ENST00000392556 RPS6KB1P23443 525 aa12.43□□□□□ -0.42
TRAF3IP2-208ENST00000392556 HOXA13P31271 388 aaPredicted RBP12.43□□□□□ -0.42
TRAF3IP2-208ENST00000392556 PEX19P40855 299 aa12.43□□□□□ -0.42
TRAF3IP2-208ENST00000392556 TAP1Q03518 808 aa12.43□□□□□ -0.42
TRAF3IP2-208ENST00000392556 XRCC4Q13426 336 aa12.43□□□□□ -0.42
TRAF3IP2-208ENST00000392556 RNF187Q5TA31 235 aaPredicted RBP12.43□□□□□ -0.42
TRAF3IP2-208ENST00000392556 SPECC1LQ69YQ0 1117 aa12.43□□□□□ -0.42
TRAF3IP2-208ENST00000392556 SLC30A9Q6PML9 568 aa12.43□□□□□ -0.42
TRAF3IP2-208ENST00000392556 CCNI2Q6ZMN8 369 aaPredicted RBP12.43□□□□□ -0.42
TRAF3IP2-208ENST00000392556 NFXL1Q6ZNB6 911 aa12.43□□□□□ -0.42
TRAF3IP2-208ENST00000392556 SDCCAG8Q86SQ7 713 aaPredicted RBP12.43□□□□□ -0.42
TRAF3IP2-208ENST00000392556 MB21D2Q8IYB1 491 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms