RNA–Protein interactions for RNA: ENST00000390368.2

TRBV6-5-201, Transcript of T cell receptor beta variable 6-5, humanhuman

APPRIS P1 BASIC

Gene TRBV6-5, Length 410 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-5-201ENST00000390368 CCDC85BQ15834 202 aaPredicted RBP11.07□□□□□ -0.64
TRBV6-5-201ENST00000390368 TMEM119Q4V9L6 283 aa11.07□□□□□ -0.64
TRBV6-5-201ENST00000390368 CDCA2Q69YH5 1023 aaPredicted RBP11.07□□□□□ -0.64
TRBV6-5-201ENST00000390368 TWF2Q6IBS0 349 aaKnown RBP11.07□□□□□ -0.64
TRBV6-5-201ENST00000390368 LRRC55Q6ZSA7 311 aa11.07□□□□□ -0.64
TRBV6-5-201ENST00000390368 DAW1Q8N136 415 aa11.07□□□□□ -0.64
TRBV6-5-201ENST00000390368 SPRYD3Q8NCJ5 442 aa11.07□□□□□ -0.64
TRBV6-5-201ENST00000390368 PPM1EQ8WY54 764 aa11.07□□□□□ -0.64
TRBV6-5-201ENST00000390368 AK8Q96MA6 479 aa11.07□□□□□ -0.64
TRBV6-5-201ENST00000390368 USP28Q96RU2 1077 aa11.07□□□□□ -0.64
TRBV6-5-201ENST00000390368 PLIN2Q99541 437 aa11.07□□□□□ -0.64
TRBV6-5-201ENST00000390368 ZSCAN16Q9H4T2 348 aaPredicted RBP11.07□□□□□ -0.64
TRBV6-5-201ENST00000390368 CWH43Q9H720 699 aa11.07□□□□□ -0.64
TRBV6-5-201ENST00000390368 PRDM6Q9NQX0 595 aa11.07□□□□□ -0.64
TRBV6-5-201ENST00000390368 FAM105AQ9NUU6 356 aa11.07□□□□□ -0.64
TRBV6-5-201ENST00000390368 DNM3Q9UQ16 869 aa11.07□□□□□ -0.64
TRBV6-5-201ENST00000390368 LRRIQ4A6NIV6 560 aa11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 INO80B-WBP1J3KQ70 363 aa11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 B4GALT5O43286 388 aa11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 EOMESO95936 686 aa11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 RB1P06400 928 aa11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 MARCKSP29966 332 aaPredicted RBP11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 LONP1P36776 959 aaKnown RBP11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 MAPK7Q13164 816 aa11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 GPM6BQ13491 265 aa11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 PKP1Q13835 747 aa11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 ZRSR1Q15695 479 aaKnown RBP11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 RINT1Q6NUQ1 792 aa11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 C1orf186Q6ZWK4 172 aa11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 USP49Q70CQ1 688 aa11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 CABP7Q86V35 215 aa11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 MICALL1Q8N3F8 863 aa11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 LPPQ93052 612 aa11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 CPB2Q96IY4 423 aa11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 RUSC1Q9BVN2 902 aa11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 TMEM117Q9H0C3 514 aa11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 NT5C3AQ9H0P0 336 aa11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 TYW1Q9NV66 732 aaKnown RBP11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 RNF216Q9NWF9 866 aaPredicted RBP11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 LMCD1Q9NZU5 365 aa11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 FBXO2Q9UK22 296 aaPredicted RBP11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 RWDD3Q9Y3V2 267 aa11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 PRRC2BQ5JSZ5 2229 aaKnown RBP11.06□□□□□ -0.64
TRBV6-5-201ENST00000390368 TRANK1O15050 2925 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 TTLL13PA6NNM8 815 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 GRM6O15303 877 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 GTPBP6O43824 516 aaPredicted RBP11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 ZNF623O75123 536 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 HIP1RO75146 1068 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 ERLIN2O94905 339 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 EDN1P05305 212 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 ARF4P18085 180 aaPredicted RBP11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 AXLP30530 894 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 NAMPTP43490 491 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 SLC12A3P55017 1021 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 CEBPZQ03701 1054 aaKnown RBP11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 PCBP1Q15365 356 aaKnown RBP eCLIP11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 LONRF3Q496Y0 759 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 SPECC1Q5M775 1068 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 PPP4R3CPQ6ZMV5 832 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 MRPL10Q7Z7H8 261 aaKnown RBP11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 SYT2Q8N9I0 419 aaPredicted RBP11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 RNF169Q8NCN4 708 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 SMG8Q8ND04 991 aaKnown RBP11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 HELQQ8TDG4 1101 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 P2RX5Q93086 422 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 EPSTI1Q96J88 318 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 CLIC6Q96NY7 704 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 KIFC3Q9BVG8 833 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 EIF2AQ9BY44 585 aaKnown RBP11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 CCDC113Q9H0I3 377 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 CSRNP2Q9H175 543 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 FZD8Q9H461 694 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 BLOC1S4Q9NUP1 217 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 PCDHB2Q9Y5E7 798 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 SRPRBQ9Y5M8 271 aaKnown RBP11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 MORC2Q9Y6X9 1032 aaPredicted RBP11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 TCHHQ07283 1943 aa11.05□□□□□ -0.64
TRBV6-5-201ENST00000390368 PRUNE2Q8WUY3 3088 aa11.04□□□□□ -0.64
TRBV6-5-201ENST00000390368 HOXA2O43364 376 aa11.04□□□□□ -0.64
TRBV6-5-201ENST00000390368 SLC26A4O43511 780 aa11.04□□□□□ -0.64
TRBV6-5-201ENST00000390368 OFD1O75665 1012 aa11.04□□□□□ -0.64
TRBV6-5-201ENST00000390368 F13A1P00488 732 aa11.04□□□□□ -0.64
TRBV6-5-201ENST00000390368 ITGB1P05556 798 aa11.04□□□□□ -0.64
TRBV6-5-201ENST00000390368 HSP90AA1P07900 732 aaKnown RBP11.04□□□□□ -0.64
TRBV6-5-201ENST00000390368 ZSCAN22P10073 491 aaPredicted RBP11.04□□□□□ -0.64
TRBV6-5-201ENST00000390368 SKIP12755 728 aa11.04□□□□□ -0.64
TRBV6-5-201ENST00000390368 PLCG1P19174 1290 aa11.04□□□□□ -0.64
TRBV6-5-201ENST00000390368 NCLP19338 710 aaKnown RBP11.04□□□□□ -0.64
TRBV6-5-201ENST00000390368 DNAJB1P25685 340 aa11.04□□□□□ -0.64
TRBV6-5-201ENST00000390368 NASPP49321 788 aaPredicted RBP11.04□□□□□ -0.64
TRBV6-5-201ENST00000390368 RAB27AP51159 221 aa11.04□□□□□ -0.64
TRBV6-5-201ENST00000390368 CAMK1Q14012 370 aa11.04□□□□□ -0.64
TRBV6-5-201ENST00000390368 SLC39A14Q15043 492 aa11.04□□□□□ -0.64
TRBV6-5-201ENST00000390368 KARSQ15046 597 aaKnown RBP11.04□□□□□ -0.64
TRBV6-5-201ENST00000390368 FAM187BQ17R55 369 aa11.04□□□□□ -0.64
TRBV6-5-201ENST00000390368 ARSHQ5FYA8 562 aa11.04□□□□□ -0.64
TRBV6-5-201ENST00000390368 FOXD4L5Q5VV16 416 aaPredicted RBP11.04□□□□□ -0.64
TRBV6-5-201ENST00000390368 NOTUMQ6P988 496 aa11.04□□□□□ -0.64
TRBV6-5-201ENST00000390368 AGMOQ6ZNB7 445 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms