RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 PRCPP42785 496 aa16.51■□□□□ 0.23
ALK-201ENST00000389048 CDK8P49336 464 aa16.51■□□□□ 0.23
ALK-201ENST00000389048 PSMD2Q13200 908 aa16.51■□□□□ 0.23
ALK-201ENST00000389048 ZNF667Q5HYK9 610 aa16.51■□□□□ 0.23
ALK-201ENST00000389048 EPAS1Q99814 870 aa16.51■□□□□ 0.23
ALK-201ENST00000389048 FAM83BQ5T0W9 1011 aa16.51■□□□□ 0.23
ALK-201ENST00000389048 OLFML2BQ68BL8 750 aa16.51■□□□□ 0.23
ALK-201ENST00000389048 SLC7A5P2Q9GIP4 190 aa16.51■□□□□ 0.23
ALK-201ENST00000389048 BRAFP15056 766 aa16.51■□□□□ 0.23
ALK-201ENST00000389048 PRAMEP78395 509 aa16.51■□□□□ 0.23
ALK-201ENST00000389048 TMA16Q96EY4 203 aaKnown RBP16.51■□□□□ 0.23
ALK-201ENST00000389048 RUBCNLQ9H714 662 aa16.51■□□□□ 0.23
ALK-201ENST00000389048 NEDD4P46934 1319 aa16.51■□□□□ 0.23
ALK-201ENST00000389048 FAM135BQ49AJ0 1406 aa16.51■□□□□ 0.23
ALK-201ENST00000389048 PP2D1A8MPX8 630 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 KPNA7A9QM74 516 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 ZFXP17010 805 aaPredicted RBP16.5■□□□□ 0.23
ALK-201ENST00000389048 PPP2R2AP63151 447 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 CCNA1P78396 465 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 ARMC9Q7Z3E5 817 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 ZBTB1Q9Y2K1 713 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 INPP5DQ92835 1189 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 FAM118BQ9BPY3 351 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 NDE1Q9NXR1 346 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 MID2Q9UJV3 735 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 HPCAL4Q9UM19 191 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 GMNCA6NCL1 334 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 MYO1GB0I1T2 1018 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 MARCOQ9UEW3 520 aaPredicted RBP16.5■□□□□ 0.23
ALK-201ENST00000389048 WDR17Q8IZU2 1322 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 ENO4A6NNW6 628 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 SEMA3EO15041 775 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 CCDC92Q53HC0 331 aaPredicted RBP16.5■□□□□ 0.23
ALK-201ENST00000389048 ARHGEF1Q92888 912 aaKnown RBP16.5■□□□□ 0.23
ALK-201ENST00000389048 SERPINB13Q9UIV8 391 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 PCDHA6Q9UN73 950 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 CLCA2Q9UQC9 943 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 PCDHA8Q9Y5H6 950 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 USP17L15C9J2P7 530 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 USP17L13C9JLJ4 530 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 USP17L11C9JVI0 530 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 USP17L18D6R9N7 530 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 USP17L22D6RA61 530 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 USP17L17D6RBQ6 530 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 USP17L19D6RCP7 530 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 USP17L20D6RJB6 530 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 IPO5O00410 1097 aaKnown RBP16.5■□□□□ 0.23
ALK-201ENST00000389048 COPB2P35606 906 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 GPC3P51654 580 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 LRRC74AQ0VAA2 488 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 USP17L24Q0WX57 530 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 ZNF568Q3ZCX4 644 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 USP17L6PQ6QN14 398 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 OR6P1Q8NGX9 317 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 SP110Q9HB58 689 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 TRIM33Q9UPN9 1127 aa16.5■□□□□ 0.23
ALK-201ENST00000389048 ATF5Q9Y2D1 282 aaPredicted RBP16.5■□□□□ 0.23
ALK-201ENST00000389048 IFNA8P32881 189 aa16.49■□□□□ 0.23
ALK-201ENST00000389048 NUMBP49757 651 aa16.49■□□□□ 0.23
ALK-201ENST00000389048 USP14P54578 494 aa16.49■□□□□ 0.23
ALK-201ENST00000389048 CYGBQ8WWM9 190 aa16.49■□□□□ 0.23
ALK-201ENST00000389048 SRP68Q9UHB9 627 aaKnown RBP16.49■□□□□ 0.23
ALK-201ENST00000389048 RAPGEF6Q8TEU7 1601 aa16.49■□□□□ 0.23
ALK-201ENST00000389048 CC2D1AQ6P1N0 951 aaPredicted RBP16.49■□□□□ 0.23
ALK-201ENST00000389048 USP6NLQ92738 828 aa16.49■□□□□ 0.23
ALK-201ENST00000389048 ZMYM3Q14202 1370 aa16.49■□□□□ 0.23
ALK-201ENST00000389048 PRPF3O43395 683 aaKnown RBP16.49■□□□□ 0.23
ALK-201ENST00000389048 GPC5P78333 572 aa16.49■□□□□ 0.23
ALK-201ENST00000389048 AGAP3Q96P47 875 aa16.49■□□□□ 0.23
ALK-201ENST00000389048 OSBPL9Q96SU4 736 aa16.49■□□□□ 0.23
ALK-201ENST00000389048 SPON2Q9BUD6 331 aa16.49■□□□□ 0.23
ALK-201ENST00000389048 PPARGP37231 505 aaPredicted RBP16.49■□□□□ 0.23
ALK-201ENST00000389048 MRPL28Q13084 256 aaKnown RBP16.49■□□□□ 0.23
ALK-201ENST00000389048 LOC102724428A0A0B4J2F2 783 aa16.49■□□□□ 0.23
ALK-201ENST00000389048 CLDN3O15551 220 aa16.49■□□□□ 0.23
ALK-201ENST00000389048 TRPC1P48995 793 aa16.49■□□□□ 0.23
ALK-201ENST00000389048 SIK1P57059 783 aa16.49■□□□□ 0.23
ALK-201ENST00000389048 ROR1Q01973 937 aa16.49■□□□□ 0.23
ALK-201ENST00000389048 IL31Q6EBC2 164 aa16.49■□□□□ 0.23
ALK-201ENST00000389048 DHX35Q9H5Z1 703 aaKnown RBP16.49■□□□□ 0.23
ALK-201ENST00000389048 ITSN2Q9NZM3 1697 aa16.49■□□□□ 0.23
ALK-201ENST00000389048 PNMA6FA0A0J9YX94 578 aa16.48■□□□□ 0.23
ALK-201ENST00000389048 POTEB3A0JP26 581 aa16.48■□□□□ 0.23
ALK-201ENST00000389048 POTECB2RU33 542 aa16.48■□□□□ 0.23
ALK-201ENST00000389048 NR3C1P04150 777 aa16.48■□□□□ 0.23
ALK-201ENST00000389048 ATP1A1P05023 1023 aaKnown RBP16.48■□□□□ 0.23
ALK-201ENST00000389048 CIITAP33076 1130 aa16.48■□□□□ 0.23
ALK-201ENST00000389048 RECQLP46063 649 aaPredicted RBP16.48■□□□□ 0.23
ALK-201ENST00000389048 RESP18Q5W5W9 173 aa16.48■□□□□ 0.23
ALK-201ENST00000389048 TWF2Q6IBS0 349 aaKnown RBP16.48■□□□□ 0.23
ALK-201ENST00000389048 POTEBQ6S5H4 581 aa16.48■□□□□ 0.23
ALK-201ENST00000389048 THEM5Q8N1Q8 247 aa16.48■□□□□ 0.23
ALK-201ENST00000389048 GALNT4Q8N4A0 578 aa16.48■□□□□ 0.23
ALK-201ENST00000389048 USP33Q8TEY7 942 aa16.48■□□□□ 0.23
ALK-201ENST00000389048 KANSL2Q9H9L4 492 aa16.48■□□□□ 0.23
ALK-201ENST00000389048 ASNSD1Q9NWL6 643 aa16.48■□□□□ 0.23
ALK-201ENST00000389048 SEL1LQ9UBV2 794 aa16.48■□□□□ 0.23
ALK-201ENST00000389048 PODXLO00592 558 aa16.48■□□□□ 0.23
ALK-201ENST00000389048 MTMR1Q13613 665 aa16.48■□□□□ 0.23
ALK-201ENST00000389048 AARS2Q5JTZ9 985 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms