RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 PRKCBP05771 671 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 ALDH3A1P30838 453 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 CLCN6P51797 869 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 C6orf163Q5TEZ5 329 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 HHATQ5VTY9 493 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 RSRC2Q7L4I2 434 aaKnown RBP13.16□□□□□ -0.3
GABPB1-203ENST00000380877 ENOSF1Q7L5Y1 443 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 KIAA1683Q9H0B3 1180 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 SUCLA2Q9P2R7 463 aaPredicted RBP13.16□□□□□ -0.3
GABPB1-203ENST00000380877 ADAMTSL3P82987 1691 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 EIF3DO15371 548 aaKnown RBP eCLIP13.16□□□□□ -0.3
GABPB1-203ENST00000380877 ATP8B1O43520 1251 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 FTLP02792 175 aaPredicted RBP13.16□□□□□ -0.3
GABPB1-203ENST00000380877 UCHL3P15374 230 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 TAL1P17542 331 aaPredicted RBP13.16□□□□□ -0.3
GABPB1-203ENST00000380877 DUOXA2Q1HG44 320 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 RDM1Q8NG50 284 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 SCFD2Q8WU76 684 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 WDR24Q96S15 920 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 PARK7Q99497 189 aaKnown RBP13.16□□□□□ -0.3
GABPB1-203ENST00000380877 RUSC1Q9BVN2 902 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 SGK1O00141 431 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 DDNO94850 711 aaPredicted RBP13.16□□□□□ -0.3
GABPB1-203ENST00000380877 ACTN1P12814 892 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 CIITAP33076 1130 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 SLC7A5Q01650 507 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 GABPB2Q8TAK5 448 aaPredicted RBP13.16□□□□□ -0.3
GABPB1-203ENST00000380877 PLCD4Q9BRC7 762 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 KIAA0391O15091 583 aaKnown RBP13.16□□□□□ -0.3
GABPB1-203ENST00000380877 SNRNP35Q16560 246 aaKnown RBP13.16□□□□□ -0.3
GABPB1-203ENST00000380877 ARMCX2Q7L311 632 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 KSR1Q8IVT5 923 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 GPRC5AQ8NFJ5 357 aa13.16□□□□□ -0.3
GABPB1-203ENST00000380877 GCOM2Q9BZD3 368 aaPredicted RBP13.16□□□□□ -0.3
GABPB1-203ENST00000380877 MAP3K20Q9NYL2 800 aaKnown RBP13.16□□□□□ -0.3
GABPB1-203ENST00000380877 GOLGA8KD6RF30 607 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 CCDC188H7C350 402 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 VIL1P09327 827 aaKnown RBP13.15□□□□□ -0.3
GABPB1-203ENST00000380877 CETPP11597 493 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 VEGFAP15692 232 aaPredicted RBP13.15□□□□□ -0.3
GABPB1-203ENST00000380877 ACOT2P49753 483 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 DYNLT1P63172 113 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 APBA1Q02410 837 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 MXD4Q14582 209 aaPredicted RBP13.15□□□□□ -0.3
GABPB1-203ENST00000380877 FBXO38Q6PIJ6 1188 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 B4GALNT4Q76KP1 1039 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 PCDHAC2Q9Y5I4 1007 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 MRPS25P82663 173 aaKnown RBP13.15□□□□□ -0.3
GABPB1-203ENST00000380877 RAD9BQ6WBX8 426 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 DSTYKQ6XUX3 929 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 OR6J1Q8NGC5 347 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 FAM71BQ8TC56 605 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 GTF3C2Q8WUA4 911 aaPredicted RBP13.15□□□□□ -0.3
GABPB1-203ENST00000380877 MKNK1Q9BUB5 465 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 SSU72P8A0A1W2PR75 194 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 RSPH10B2B2RC85 870 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 RSPH10BP0C881 870 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 SLC9A1P19634 815 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 PHBP35232 272 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 ACTR2P61160 394 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 SYTL5Q8TDW5 730 aaPredicted RBP13.15□□□□□ -0.3
GABPB1-203ENST00000380877 SLC38A10Q9HBR0 1119 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 APEX2Q9UBZ4 518 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 ARHGEF37A1IGU5 675 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 ATP1A2P50993 1020 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 HUNKP57058 714 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 Q4G0T1 1027 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 NGRNQ9NPE2 291 aaKnown RBP13.15□□□□□ -0.3
GABPB1-203ENST00000380877 HOMER3Q9NSC5 361 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 HDAC6Q9UBN7 1215 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 LRFN2Q9ULH4 789 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 PPP2R3BQ9Y5P8 575 aa13.15□□□□□ -0.3
GABPB1-203ENST00000380877 DYNC1LI2O43237 492 aaPredicted RBP13.14□□□□□ -0.31
GABPB1-203ENST00000380877 PRPSAP2O60256 369 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 GH1P01241 217 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 GNA15P30679 374 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 ZNF157P51786 506 aaPredicted RBP13.14□□□□□ -0.31
GABPB1-203ENST00000380877 NFRKBQ6P4R8 1299 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 SIX6OS1Q8N1H7 587 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 ANKRD42Q8N9B4 389 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 PDCD2LQ9BRP1 358 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 SEPT10Q9P0V9 454 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 ATP8A1Q9Y2Q0 1164 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 NCK2O43639 380 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 BEST2Q8NFU1 509 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 ERGIC2Q96RQ1 377 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 STK33Q9BYT3 514 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 UBE4BO95155 1302 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 SLURP2P0DP57 97 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 RFC5P40937 340 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 AP3M2P53677 418 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 SLC18A3Q16572 532 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 CFAP157Q5JU67 520 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 TTI2Q6NXR4 508 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 SAMD3Q8N6K7 520 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 CYP2W1Q8TAV3 490 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 MGARPQ8TDB4 240 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 OSBPL9Q96SU4 736 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 FHOD1Q9Y613 1164 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 TOPAZ1Q8N9V7 1692 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms