RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 AGBL3Q8NEM8 1001 aa19.1■□□□□ 0.65
UBL3-201ENST00000380680 ZNF564Q8TBZ8 553 aaPredicted RBP19.1■□□□□ 0.65
UBL3-201ENST00000380680 GOLPH3Q9H4A6 298 aa19.1■□□□□ 0.65
UBL3-201ENST00000380680 PLAAQ9Y263 795 aa19.1■□□□□ 0.65
UBL3-201ENST00000380680 GAKO14976 1311 aa19.1■□□□□ 0.65
UBL3-201ENST00000380680 SYNGAP1Q96PV0 1343 aa19.1■□□□□ 0.65
UBL3-201ENST00000380680 TLR3O15455 904 aaKnown RBP19.1■□□□□ 0.65
UBL3-201ENST00000380680 FAM149B1Q96BN6 582 aa19.1■□□□□ 0.65
UBL3-201ENST00000380680 PSMD1Q99460 953 aa19.1■□□□□ 0.65
UBL3-201ENST00000380680 TMX2Q9Y320 296 aa19.1■□□□□ 0.65
UBL3-201ENST00000380680 NOC2LQ9Y3T9 749 aaKnown RBP19.1■□□□□ 0.65
UBL3-201ENST00000380680 ZRANB2O95218 330 aaKnown RBP eCLIP19.1■□□□□ 0.65
UBL3-201ENST00000380680 ARP10275 920 aa19.1■□□□□ 0.65
UBL3-201ENST00000380680 CNGA1P29973 690 aa19.1■□□□□ 0.65
UBL3-201ENST00000380680 PSMC6P62333 389 aa19.1■□□□□ 0.65
UBL3-201ENST00000380680 FYB2Q5VWT5 728 aa19.1■□□□□ 0.65
UBL3-201ENST00000380680 TAAR1Q96RJ0 339 aa19.1■□□□□ 0.65
UBL3-201ENST00000380680 SMC6Q96SB8 1091 aa19.1■□□□□ 0.65
UBL3-201ENST00000380680 NUP85Q9BW27 656 aa19.1■□□□□ 0.65
UBL3-201ENST00000380680 KCND2Q9NZV8 630 aa19.1■□□□□ 0.65
UBL3-201ENST00000380680 AMACRQ9UHK6 382 aa19.1■□□□□ 0.65
UBL3-201ENST00000380680 AGO2Q9UKV8 859 aaKnown RBP19.1■□□□□ 0.65
UBL3-201ENST00000380680 A0A087X0T9 212 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 NDC80O14777 642 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 FAM228BP0C875 321 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 ERICH1Q86X53 443 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 AGPAT1Q99943 283 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 SYNJ2BP-COX16A0A087WUM0 186 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 CAPN9O14815 690 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 CASP4P49662 377 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 GIT2Q14161 759 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 SURF1Q15526 300 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 DACT2Q5SW24 774 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 LGSNQ5TDP6 509 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 KLHDC7AQ5VTJ3 777 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 GJB7Q6PEY0 223 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 HACE1Q8IYU2 909 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 SCFD1Q8WVM8 642 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 COX16Q9P0S2 106 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 DGAT1O75907 488 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 RFX1P22670 979 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 C15orf52Q6ZUT6 534 aaKnown RBP19.09■□□□□ 0.65
UBL3-201ENST00000380680 MAP7D3Q8IWC1 876 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 GPD1LQ8N335 351 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 FAM167AQ96KS9 214 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 DUSP9Q99956 384 aaKnown RBP19.09■□□□□ 0.65
UBL3-201ENST00000380680 FAM49AQ9H0Q0 323 aaPredicted RBP19.09■□□□□ 0.65
UBL3-201ENST00000380680 SPC25Q9HBM1 224 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 RBAKQ9NYW8 714 aaPredicted RBP19.09■□□□□ 0.65
UBL3-201ENST00000380680 PLS3P13797 630 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 TBX2Q13207 712 aaPredicted RBP19.09■□□□□ 0.65
UBL3-201ENST00000380680 ZNF667Q5HYK9 610 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 RFX6Q8HWS3 928 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 TCP11Q8WWU5 503 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 TMEM143Q96AN5 459 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 BLOC1S4Q9NUP1 217 aa19.09■□□□□ 0.65
UBL3-201ENST00000380680 CTNND1O60716 968 aaKnown RBP19.08■□□□□ 0.65
UBL3-201ENST00000380680 HNRNPH2P55795 449 aaKnown RBP19.08■□□□□ 0.65
UBL3-201ENST00000380680 NBPF9Q3BBW0 867 aa19.08■□□□□ 0.65
UBL3-201ENST00000380680 MED10Q9BTT4 135 aa19.08■□□□□ 0.65
UBL3-201ENST00000380680 CA8P35219 290 aa19.08■□□□□ 0.64
UBL3-201ENST00000380680 PDCLQ13371 301 aa19.08■□□□□ 0.64
UBL3-201ENST00000380680 NAB2Q15742 525 aa19.08■□□□□ 0.64
UBL3-201ENST00000380680 PPP1R2P3Q6NXS1 205 aa19.08■□□□□ 0.64
UBL3-201ENST00000380680 KCNK18Q7Z418 384 aa19.08■□□□□ 0.64
UBL3-201ENST00000380680 RHPN2Q8IUC4 686 aa19.08■□□□□ 0.64
UBL3-201ENST00000380680 CAPN7Q9Y6W3 813 aa19.08■□□□□ 0.64
UBL3-201ENST00000380680 CHD2O14647 1828 aaKnown RBP19.08■□□□□ 0.64
UBL3-201ENST00000380680 TARSL2A2RTX5 802 aaKnown RBP19.08■□□□□ 0.64
UBL3-201ENST00000380680 GRID2IPA4D2P6 1211 aa19.08■□□□□ 0.64
UBL3-201ENST00000380680 ZNF568Q3ZCX4 644 aa19.08■□□□□ 0.64
UBL3-201ENST00000380680 UNC45AQ9H3U1 944 aa19.08■□□□□ 0.64
UBL3-201ENST00000380680 TBK1Q9UHD2 729 aa19.08■□□□□ 0.64
UBL3-201ENST00000380680 DIS3Q9Y2L1 958 aaKnown RBP19.08■□□□□ 0.64
UBL3-201ENST00000380680 PHBP35232 272 aa19.07■□□□□ 0.64
UBL3-201ENST00000380680 ACOT2P49753 483 aa19.07■□□□□ 0.64
UBL3-201ENST00000380680 SNRNP35Q16560 246 aaKnown RBP19.07■□□□□ 0.64
UBL3-201ENST00000380680 FIGNQ5HY92 759 aa19.07■□□□□ 0.64
UBL3-201ENST00000380680 TMEM35BQ8NCS4 154 aa19.07■□□□□ 0.64
UBL3-201ENST00000380680 ACSL3O95573 720 aa19.07■□□□□ 0.64
UBL3-201ENST00000380680 FGRP09769 529 aa19.07■□□□□ 0.64
UBL3-201ENST00000380680 IFT88Q13099 833 aa19.07■□□□□ 0.64
UBL3-201ENST00000380680 SLMAPQ14BN4 828 aa19.07■□□□□ 0.64
UBL3-201ENST00000380680 XKR3Q5GH77 459 aa19.07■□□□□ 0.64
UBL3-201ENST00000380680 TRIM65Q6PJ69 517 aa19.07■□□□□ 0.64
UBL3-201ENST00000380680 NKX2-3Q8TAU0 364 aa19.07■□□□□ 0.64
UBL3-201ENST00000380680 MKNK1Q9BUB5 465 aa19.07■□□□□ 0.64
UBL3-201ENST00000380680 AGPAT3Q9NRZ7 376 aa19.07■□□□□ 0.64
UBL3-201ENST00000380680 INTS13Q9NVM9 706 aa19.07■□□□□ 0.64
UBL3-201ENST00000380680 GGA3Q9NZ52 723 aa19.07■□□□□ 0.64
UBL3-201ENST00000380680 RNF181Q9P0P0 153 aa19.07■□□□□ 0.64
UBL3-201ENST00000380680 PODXLO00592 558 aa19.07■□□□□ 0.64
UBL3-201ENST00000380680 RASGRF2O14827 1237 aa19.07■□□□□ 0.64
UBL3-201ENST00000380680 EIF3DO15371 548 aaKnown RBP eCLIP19.07■□□□□ 0.64
UBL3-201ENST00000380680 SART1O43290 800 aaKnown RBP19.07■□□□□ 0.64
UBL3-201ENST00000380680 MED7O43513 233 aa19.07■□□□□ 0.64
UBL3-201ENST00000380680 CXCL9Q07325 125 aa19.07■□□□□ 0.64
UBL3-201ENST00000380680 OR6B2Q6IFH4 312 aa19.07■□□□□ 0.64
UBL3-201ENST00000380680 TRIM50Q86XT4 487 aa19.07■□□□□ 0.64
UBL3-201ENST00000380680 GMCL1P1Q8NEA9 526 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms