RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 GPS1Q13098 491 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 KPNB1Q14974 876 aaKnown RBP18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 TRIM72Q6ZMU5 477 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 TMEM35BQ8NCS4 154 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 ZIM3Q96PE6 472 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 PIH1D3Q9NQM4 214 aaKnown RBP18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 TUBE1Q9UJT0 475 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 NEDD4P46934 1319 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 CCND2P30279 289 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 PLA2G4AP47712 749 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 ATP2C1P98194 919 aaPredicted RBP18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 TBCCQ15814 346 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 TC2NQ8N9U0 490 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 ANO3Q9BYT9 981 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 MRGBPQ9NV56 204 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 WDR17Q8IZU2 1322 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 CCDC159P0C7I6 412 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 SYDE2Q5VT97 1194 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 ENOSF1Q7L5Y1 443 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 SKA2Q8WVK7 121 aaPredicted RBP18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 KCNK16Q96T55 309 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 ZNF229Q9UJW7 825 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 KRT7P08729 469 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 HSPA13P48723 471 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 TAP1Q03518 808 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 INPP5AQ14642 412 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 WDR93Q6P2C0 686 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 ATL2Q8NHH9 583 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 GTSE1Q9NYZ3 720 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 FHOD1Q9Y613 1164 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 UBN2Q6ZU65 1347 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 KIF22Q14807 665 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 C16orf89Q6UX73 402 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 TBC1D10CQ8IV04 446 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 XDHP47989 1333 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 C16orf96A6NNT2 1141 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 GFAPP14136 432 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 CASP1P29466 404 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 SLC18A3Q16572 532 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 KCTD1Q719H9 257 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 PPM1NQ8N819 430 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 FAM149B1Q96BN6 582 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 TMEM51Q9NW97 253 aa18.16■□□□□ 0.5
COL4A3BP-203ENST00000380494 ATP8B3O60423 1300 aa18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 RABGAP1LQ5R372 815 aa18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 MYLK4Q86YV6 388 aaPredicted RBP18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 PAWRQ96IZ0 340 aaKnown RBP18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 TSSK1BQ9BXA7 367 aa18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 SLC12A6Q9UHW9 1150 aa18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 FBXO2Q9UK22 296 aaPredicted RBP18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 FAM47DPA6NHR8 397 aa18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 PIK3R2O00459 728 aa18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 PPARGP37231 505 aaPredicted RBP18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 DRAP1Q14919 205 aaPredicted RBP18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 VPS11Q9H270 941 aa18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 SEL1LQ9UBV2 794 aa18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 H0Y626 953 aa18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 SLC16A3O15427 465 aaKnown RBP18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 TRIM16O95361 564 aa18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 FTLP02792 175 aaPredicted RBP18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 MAP4P27816 1152 aaKnown RBP18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 CYB5R4Q7L1T6 521 aa18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 SFR1Q86XK3 245 aa18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 PIK3R5Q8WYR1 880 aa18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 CYP4F11Q9HBI6 524 aa18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 H0YIN7 160 aa18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 TMED10P49755 219 aaKnown RBP18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 LRRC8BQ6P9F7 803 aa18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 ADD3Q9UEY8 706 aaKnown RBP18.15■□□□□ 0.5
COL4A3BP-203ENST00000380494 KDM6BO15054 1643 aa18.14■□□□□ 0.5
COL4A3BP-203ENST00000380494 KRT8P05787 483 aa18.14■□□□□ 0.5
COL4A3BP-203ENST00000380494 PSAPP07602 524 aa18.14■□□□□ 0.5
COL4A3BP-203ENST00000380494 MRPS15P82914 257 aaKnown RBP18.14■□□□□ 0.5
COL4A3BP-203ENST00000380494 TFAMQ00059 246 aaKnown RBP18.14■□□□□ 0.5
COL4A3BP-203ENST00000380494 ALX1Q15699 326 aa18.14■□□□□ 0.5
COL4A3BP-203ENST00000380494 XXYLT1Q8NBI6 393 aa18.14■□□□□ 0.5
COL4A3BP-203ENST00000380494 BHMT2Q9H2M3 363 aa18.14■□□□□ 0.5
COL4A3BP-203ENST00000380494 TBXAS1P24557 533 aaPredicted RBP18.14■□□□□ 0.49
COL4A3BP-203ENST00000380494 SERPINB3P29508 390 aa18.14■□□□□ 0.49
COL4A3BP-203ENST00000380494 UBE2SQ16763 222 aa18.14■□□□□ 0.49
COL4A3BP-203ENST00000380494 CDKL3Q8IVW4 592 aaPredicted RBP18.14■□□□□ 0.49
COL4A3BP-203ENST00000380494 KIRREL3Q8IZU9 778 aa18.14■□□□□ 0.49
COL4A3BP-203ENST00000380494 NCAPD2Q15021 1401 aa18.14■□□□□ 0.49
COL4A3BP-203ENST00000380494 KIF28PB7ZC32 967 aa18.14■□□□□ 0.49
COL4A3BP-203ENST00000380494 IGF2BP3O00425 579 aaKnown RBP eCLIP18.14■□□□□ 0.49
COL4A3BP-203ENST00000380494 KLHL2O95198 593 aa18.14■□□□□ 0.49
COL4A3BP-203ENST00000380494 ENO1P06733 434 aaKnown RBP18.14■□□□□ 0.49
COL4A3BP-203ENST00000380494 ROR1Q01973 937 aa18.14■□□□□ 0.49
COL4A3BP-203ENST00000380494 EML4Q9HC35 981 aaKnown RBP18.14■□□□□ 0.49
COL4A3BP-203ENST00000380494 FUT8Q9BYC5 575 aa18.14■□□□□ 0.49
COL4A3BP-203ENST00000380494 CCDC90BQ9GZT6 254 aa18.14■□□□□ 0.49
COL4A3BP-203ENST00000380494 F8W8V4 182 aa18.14■□□□□ 0.49
COL4A3BP-203ENST00000380494 GOLGA8MH3BSY2 632 aa18.14■□□□□ 0.49
COL4A3BP-203ENST00000380494 OXER1Q8TDS5 423 aa18.14■□□□□ 0.49
COL4A3BP-203ENST00000380494 HEXIM2Q96MH2 286 aaKnown RBP18.14■□□□□ 0.49
COL4A3BP-203ENST00000380494 DDX28Q9NUL7 540 aaKnown RBP18.14■□□□□ 0.49
COL4A3BP-203ENST00000380494 KIF17Q9P2E2 1029 aa18.14■□□□□ 0.49
COL4A3BP-203ENST00000380494 PSMC3IPQ9P2W1 217 aaPredicted RBP18.14■□□□□ 0.49
COL4A3BP-203ENST00000380494 MAP3K10Q02779 954 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms