RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 POLR2AP24928 1970 aaKnown RBP23.29■■□□□ 1.32
CNTFR-202ENST00000378980 MYBL2P10244 700 aa23.29■■□□□ 1.32
CNTFR-202ENST00000378980 LMNB1P20700 586 aa23.29■■□□□ 1.32
CNTFR-202ENST00000378980 PPP3CAQ08209 521 aa23.29■■□□□ 1.32
CNTFR-202ENST00000378980 C1orf220Q5T0J3 134 aa23.29■■□□□ 1.32
CNTFR-202ENST00000378980 HDAC7Q8WUI4 952 aa23.29■■□□□ 1.32
CNTFR-202ENST00000378980 A1CFQ9NQ94 594 aaKnown RBP23.29■■□□□ 1.32
CNTFR-202ENST00000378980 DICER1Q9UPY3 1922 aaKnown RBP23.29■■□□□ 1.32
CNTFR-202ENST00000378980 UTRNP46939 3433 aa23.28■■□□□ 1.32
CNTFR-202ENST00000378980 CCDC172P0C7W6 258 aa23.28■■□□□ 1.32
CNTFR-202ENST00000378980 NOP2P46087 812 aaKnown RBP23.28■■□□□ 1.32
CNTFR-202ENST00000378980 DNA2P51530 1060 aa23.28■■□□□ 1.32
CNTFR-202ENST00000378980 R3HDM1Q15032 1099 aaKnown RBP23.28■■□□□ 1.32
CNTFR-202ENST00000378980 TMEM161BQ8NDZ6 487 aa23.28■■□□□ 1.32
CNTFR-202ENST00000378980 ZSWIM2Q8NEG5 633 aa23.28■■□□□ 1.32
CNTFR-202ENST00000378980 HVCN1Q96D96 273 aa23.28■■□□□ 1.32
CNTFR-202ENST00000378980 GABBR1Q9UBS5 961 aa23.28■■□□□ 1.32
CNTFR-202ENST00000378980 DMGDHQ9UI17 866 aaKnown RBP23.28■■□□□ 1.32
CNTFR-202ENST00000378980 NFASCO94856 1347 aa23.28■■□□□ 1.32
CNTFR-202ENST00000378980 CES2O00748 559 aa23.28■■□□□ 1.32
CNTFR-202ENST00000378980 ZNF862O60290 1169 aa23.28■■□□□ 1.32
CNTFR-202ENST00000378980 CETN1Q12798 172 aa23.28■■□□□ 1.32
CNTFR-202ENST00000378980 EPC2Q52LR7 807 aa23.28■■□□□ 1.32
CNTFR-202ENST00000378980 OTUD6AQ7L8S5 288 aa23.28■■□□□ 1.32
CNTFR-202ENST00000378980 GLYCTKQ8IVS8 523 aa23.28■■□□□ 1.32
CNTFR-202ENST00000378980 TPCN2Q8NHX9 752 aa23.28■■□□□ 1.32
CNTFR-202ENST00000378980 ATP6V0A1Q93050 837 aa23.28■■□□□ 1.32
CNTFR-202ENST00000378980 EXOC7Q9UPT5 735 aa23.28■■□□□ 1.32
CNTFR-202ENST00000378980 AFG3L2Q9Y4W6 797 aa23.28■■□□□ 1.32
CNTFR-202ENST00000378980 MYPNQ86TC9 1320 aa23.27■■□□□ 1.32
CNTFR-202ENST00000378980 SPDYE16A6NNV3 312 aaPredicted RBP23.27■■□□□ 1.32
CNTFR-202ENST00000378980 STBD1O95210 358 aa23.27■■□□□ 1.32
CNTFR-202ENST00000378980 TNNT3P45378 269 aaPredicted RBP23.27■■□□□ 1.32
CNTFR-202ENST00000378980 NPTX2P47972 431 aa23.27■■□□□ 1.32
CNTFR-202ENST00000378980 SMTNP53814 917 aa23.27■■□□□ 1.32
CNTFR-202ENST00000378980 DMP1Q13316 513 aaPredicted RBP23.27■■□□□ 1.32
CNTFR-202ENST00000378980 KIF22Q14807 665 aa23.27■■□□□ 1.32
CNTFR-202ENST00000378980 RPS6KA1Q15418 735 aa23.27■■□□□ 1.32
CNTFR-202ENST00000378980 ZNF771Q7L3S4 317 aaPredicted RBP23.27■■□□□ 1.32
CNTFR-202ENST00000378980 MAP4K3Q8IVH8 894 aa23.27■■□□□ 1.32
CNTFR-202ENST00000378980 GSPT2Q8IYD1 628 aaKnown RBP23.27■■□□□ 1.32
CNTFR-202ENST00000378980 PLEKHO2Q8TD55 490 aa23.27■■□□□ 1.32
CNTFR-202ENST00000378980 CDHR1Q96JP9 859 aa23.27■■□□□ 1.32
CNTFR-202ENST00000378980 ACBD3Q9H3P7 528 aa23.27■■□□□ 1.32
CNTFR-202ENST00000378980 TBX20Q9UMR3 447 aa23.27■■□□□ 1.32
CNTFR-202ENST00000378980 CCDC169A6NNP5 214 aa23.26■■□□□ 1.31
CNTFR-202ENST00000378980 DKC1O60832 514 aaKnown RBP eCLIP23.26■■□□□ 1.31
CNTFR-202ENST00000378980 KIF4AO95239 1232 aa23.26■■□□□ 1.31
CNTFR-202ENST00000378980 MCCD1P59942 119 aaPredicted RBP23.26■■□□□ 1.31
CNTFR-202ENST00000378980 ARHGAP44Q17R89 818 aa23.26■■□□□ 1.31
CNTFR-202ENST00000378980 KIFAP3Q92845 792 aa23.26■■□□□ 1.31
CNTFR-202ENST00000378980 CEP170P1Q96L14 293 aa23.26■■□□□ 1.31
CNTFR-202ENST00000378980 MAF1Q9H063 256 aa23.26■■□□□ 1.31
CNTFR-202ENST00000378980 JPH1Q9HDC5 661 aaPredicted RBP23.26■■□□□ 1.31
CNTFR-202ENST00000378980 PTPRFP10586 1907 aa23.26■■□□□ 1.31
CNTFR-202ENST00000378980 STAM2O75886 525 aa23.26■■□□□ 1.31
CNTFR-202ENST00000378980 PSAPP07602 524 aa23.26■■□□□ 1.31
CNTFR-202ENST00000378980 GCLMP48507 274 aa23.26■■□□□ 1.31
CNTFR-202ENST00000378980 HIRAP54198 1017 aaPredicted RBP23.26■■□□□ 1.31
CNTFR-202ENST00000378980 GALCP54803 685 aa23.26■■□□□ 1.31
CNTFR-202ENST00000378980 GLE1Q53GS7 698 aaKnown RBP23.26■■□□□ 1.31
CNTFR-202ENST00000378980 C8orf74Q6P047 294 aa23.26■■□□□ 1.31
CNTFR-202ENST00000378980 NLGN2Q8NFZ4 835 aa23.26■■□□□ 1.31
CNTFR-202ENST00000378980 AENQ8WTP8 325 aaKnown RBP23.26■■□□□ 1.31
CNTFR-202ENST00000378980 TAF4BQ92750 862 aa23.26■■□□□ 1.31
CNTFR-202ENST00000378980 ZMYND15Q9H091 742 aa23.26■■□□□ 1.31
CNTFR-202ENST00000378980 HOXC10Q9NYD6 342 aa23.26■■□□□ 1.31
CNTFR-202ENST00000378980 STIM2Q9P246 746 aa23.26■■□□□ 1.31
CNTFR-202ENST00000378980 MYH9P35579 1960 aaKnown RBP23.26■■□□□ 1.31
CNTFR-202ENST00000378980 NCANO14594 1321 aa23.25■■□□□ 1.31
CNTFR-202ENST00000378980 PMM2O15305 246 aa23.25■■□□□ 1.31
CNTFR-202ENST00000378980 ADRB2P07550 413 aa23.25■■□□□ 1.31
CNTFR-202ENST00000378980 SLFN11Q7Z7L1 901 aa23.25■■□□□ 1.31
CNTFR-202ENST00000378980 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.25■■□□□ 1.31
CNTFR-202ENST00000378980 SPIRE2Q8WWL2 714 aa23.25■■□□□ 1.31
CNTFR-202ENST00000378980 BSNDQ8WZ55 320 aa23.25■■□□□ 1.31
CNTFR-202ENST00000378980 VTI1AQ96AJ9 217 aa23.25■■□□□ 1.31
CNTFR-202ENST00000378980 KIFC3Q9BVG8 833 aa23.25■■□□□ 1.31
CNTFR-202ENST00000378980 SELENOOQ9BVL4 669 aa23.25■■□□□ 1.31
CNTFR-202ENST00000378980 GOLPH3Q9H4A6 298 aa23.25■■□□□ 1.31
CNTFR-202ENST00000378980 C17orf75Q9HAS0 396 aa23.25■■□□□ 1.31
CNTFR-202ENST00000378980 SLC9A2Q9UBY0 812 aa23.25■■□□□ 1.31
CNTFR-202ENST00000378980 ANKRD63C9JTQ0 380 aa23.24■■□□□ 1.31
CNTFR-202ENST00000378980 FOXN3O00409 490 aaPredicted RBP23.24■■□□□ 1.31
CNTFR-202ENST00000378980 ADSSP30520 456 aa23.24■■□□□ 1.31
CNTFR-202ENST00000378980 SLC7A5Q01650 507 aa23.24■■□□□ 1.31
CNTFR-202ENST00000378980 ARHGEF19Q8IW93 802 aa23.24■■□□□ 1.31
CNTFR-202ENST00000378980 GPC2Q8N158 579 aa23.24■■□□□ 1.31
CNTFR-202ENST00000378980 LMBR1Q8WVP7 490 aa23.24■■□□□ 1.31
CNTFR-202ENST00000378980 NTPCRQ9BSD7 190 aaKnown RBP23.24■■□□□ 1.31
CNTFR-202ENST00000378980 UBE2TQ9NPD8 197 aaPredicted RBP23.24■■□□□ 1.31
CNTFR-202ENST00000378980 KMT5AQ9NQR1 393 aa23.24■■□□□ 1.31
CNTFR-202ENST00000378980 HPCAL4Q9UM19 191 aa23.24■■□□□ 1.31
CNTFR-202ENST00000378980 TELO2Q9Y4R8 837 aa23.24■■□□□ 1.31
CNTFR-202ENST00000378980 DENND3A2RUS2 1198 aa23.24■■□□□ 1.31
CNTFR-202ENST00000378980 LRRN2O75325 713 aa23.24■■□□□ 1.31
CNTFR-202ENST00000378980 MXI1P50539 228 aa23.24■■□□□ 1.31
CNTFR-202ENST00000378980 MRPS25P82663 173 aaKnown RBP23.24■■□□□ 1.31
CNTFR-202ENST00000378980 GNPTABQ3T906 1256 aa23.24■■□□□ 1.31
CNTFR-202ENST00000378980 SUPT20HL1Q3ZLR7 823 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms