RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 PCDHGC5Q9Y5F6 944 aa21.12■□□□□ 0.97
TMEM88B-201ENST00000378821 C5orf42Q9H799 3197 aa21.12■□□□□ 0.97
TMEM88B-201ENST00000378821 ZBTB39O15060 712 aa21.11■□□□□ 0.97
TMEM88B-201ENST00000378821 ASAP2O43150 1006 aa21.11■□□□□ 0.97
TMEM88B-201ENST00000378821 MARCH6O60337 910 aa21.11■□□□□ 0.97
TMEM88B-201ENST00000378821 PPM1AP35813 382 aa21.11■□□□□ 0.97
TMEM88B-201ENST00000378821 POLGP54098 1239 aaPredicted RBP21.11■□□□□ 0.97
TMEM88B-201ENST00000378821 CTTNQ14247 550 aaKnown RBP21.11■□□□□ 0.97
TMEM88B-201ENST00000378821 DUSP6Q16828 381 aa21.11■□□□□ 0.97
TMEM88B-201ENST00000378821 TMEM184AQ6ZMB5 413 aa21.11■□□□□ 0.97
TMEM88B-201ENST00000378821 SRGAP1Q7Z6B7 1085 aa21.11■□□□□ 0.97
TMEM88B-201ENST00000378821 SMRP1Q8NCR6 262 aa21.11■□□□□ 0.97
TMEM88B-201ENST00000378821 PSPC1Q8WXF1 523 aaKnown RBP21.11■□□□□ 0.97
TMEM88B-201ENST00000378821 ZNF558Q96NG5 402 aa21.11■□□□□ 0.97
TMEM88B-201ENST00000378821 EIF2AK1Q9BQI3 630 aaKnown RBP21.11■□□□□ 0.97
TMEM88B-201ENST00000378821 MRPL9Q9BYD2 267 aaKnown RBP21.11■□□□□ 0.97
TMEM88B-201ENST00000378821 TLE6Q9H808 572 aa21.11■□□□□ 0.97
TMEM88B-201ENST00000378821 AGPAT5Q9NUQ2 364 aa21.11■□□□□ 0.97
TMEM88B-201ENST00000378821 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.11■□□□□ 0.97
TMEM88B-201ENST00000378821 LAMTOR4Q0VGL1 99 aa21.1■□□□□ 0.97
TMEM88B-201ENST00000378821 CALCRLQ16602 461 aa21.1■□□□□ 0.97
TMEM88B-201ENST00000378821 SLC39A11Q8N1S5 342 aa21.1■□□□□ 0.97
TMEM88B-201ENST00000378821 HELQQ8TDG4 1101 aa21.1■□□□□ 0.97
TMEM88B-201ENST00000378821 TCP11Q8WWU5 503 aa21.1■□□□□ 0.97
TMEM88B-201ENST00000378821 TMEM143Q96AN5 459 aa21.1■□□□□ 0.97
TMEM88B-201ENST00000378821 NLRP4Q96MN2 994 aa21.1■□□□□ 0.97
TMEM88B-201ENST00000378821 LRFN3Q9BTN0 628 aa21.1■□□□□ 0.97
TMEM88B-201ENST00000378821 TTC12Q9H892 705 aaPredicted RBP21.1■□□□□ 0.97
TMEM88B-201ENST00000378821 MINDY3Q9H8M7 445 aa21.1■□□□□ 0.97
TMEM88B-201ENST00000378821 ANKEF1Q9NU02 776 aa21.1■□□□□ 0.97
TMEM88B-201ENST00000378821 FAM105AQ9NUU6 356 aa21.1■□□□□ 0.97
TMEM88B-201ENST00000378821 SPG21Q9NZD8 308 aa21.1■□□□□ 0.97
TMEM88B-201ENST00000378821 PUF60Q9UHX1 559 aaKnown RBP21.1■□□□□ 0.97
TMEM88B-201ENST00000378821 NEMFO60524 1076 aa21.09■□□□□ 0.97
TMEM88B-201ENST00000378821 CSPG5O95196 566 aa21.09■□□□□ 0.97
TMEM88B-201ENST00000378821 HOXA11P31270 313 aaPredicted RBP21.09■□□□□ 0.97
TMEM88B-201ENST00000378821 NDUFV1P49821 464 aa21.09■□□□□ 0.97
TMEM88B-201ENST00000378821 RAB27AP51159 221 aa21.09■□□□□ 0.97
TMEM88B-201ENST00000378821 CYP4A11Q02928 519 aa21.09■□□□□ 0.97
TMEM88B-201ENST00000378821 POU5F1BQ06416 359 aa21.09■□□□□ 0.97
TMEM88B-201ENST00000378821 EMC2Q15006 297 aa21.09■□□□□ 0.97
TMEM88B-201ENST00000378821 TWF2Q6IBS0 349 aaKnown RBP21.09■□□□□ 0.97
TMEM88B-201ENST00000378821 CATSPER4Q7RTX7 472 aa21.09■□□□□ 0.97
TMEM88B-201ENST00000378821 MRPL10Q7Z7H8 261 aaKnown RBP21.09■□□□□ 0.97
TMEM88B-201ENST00000378821 RBM23Q86U06 439 aaKnown RBP21.09■□□□□ 0.97
TMEM88B-201ENST00000378821 FERMT3Q86UX7 667 aa21.09■□□□□ 0.97
TMEM88B-201ENST00000378821 IFNLR1Q8IU57 520 aaPredicted RBP21.09■□□□□ 0.97
TMEM88B-201ENST00000378821 NOSTRINQ8IVI9 506 aa21.09■□□□□ 0.97
TMEM88B-201ENST00000378821 RNF169Q8NCN4 708 aa21.09■□□□□ 0.97
TMEM88B-201ENST00000378821 VN1R2Q8NFZ6 395 aa21.09■□□□□ 0.97
TMEM88B-201ENST00000378821 MICAL1Q8TDZ2 1067 aa21.09■□□□□ 0.97
TMEM88B-201ENST00000378821 NGRNQ9NPE2 291 aaKnown RBP21.09■□□□□ 0.97
TMEM88B-201ENST00000378821 XPNPEP1Q9NQW7 623 aa21.09■□□□□ 0.97
TMEM88B-201ENST00000378821 PIN4Q9Y237 131 aaKnown RBP21.09■□□□□ 0.97
TMEM88B-201ENST00000378821 CARNS1A5YM72 827 aa21.08■□□□□ 0.97
TMEM88B-201ENST00000378821 XRCC6P12956 609 aaKnown RBP eCLIP21.08■□□□□ 0.97
TMEM88B-201ENST00000378821 ATP2B1P20020 1258 aa21.08■□□□□ 0.97
TMEM88B-201ENST00000378821 SSTR3P32745 418 aaPredicted RBP21.08■□□□□ 0.97
TMEM88B-201ENST00000378821 KRT17Q04695 432 aa21.08■□□□□ 0.97
TMEM88B-201ENST00000378821 GNL2Q13823 731 aaKnown RBP21.08■□□□□ 0.97
TMEM88B-201ENST00000378821 PCBP1Q15365 356 aaKnown RBP eCLIP21.08■□□□□ 0.97
TMEM88B-201ENST00000378821 CLUL1Q15846 466 aa21.08■□□□□ 0.97
TMEM88B-201ENST00000378821 XKR9Q5GH70 373 aa21.08■□□□□ 0.97
TMEM88B-201ENST00000378821 TMEM31Q5JXX7 168 aa21.08■□□□□ 0.97
TMEM88B-201ENST00000378821 TPH2Q8IWU9 490 aa21.08■□□□□ 0.97
TMEM88B-201ENST00000378821 K7ELQ4 463 aaPredicted RBP21.07■□□□□ 0.96
TMEM88B-201ENST00000378821 PER2O15055 1255 aa21.07■□□□□ 0.96
TMEM88B-201ENST00000378821 OFD1O75665 1012 aa21.07■□□□□ 0.96
TMEM88B-201ENST00000378821 SRGAP2CP0DJJ0 459 aa21.07■□□□□ 0.96
TMEM88B-201ENST00000378821 ALADP13716 330 aa21.07■□□□□ 0.96
TMEM88B-201ENST00000378821 U2AF2P26368 475 aaKnown RBP eCLIP21.07■□□□□ 0.96
TMEM88B-201ENST00000378821 PBX3P40426 434 aa21.07■□□□□ 0.96
TMEM88B-201ENST00000378821 BCAR1P56945 870 aa21.07■□□□□ 0.96
TMEM88B-201ENST00000378821 MXD4Q14582 209 aaPredicted RBP21.07■□□□□ 0.96
TMEM88B-201ENST00000378821 POP1Q99575 1024 aaKnown RBP21.07■□□□□ 0.96
TMEM88B-201ENST00000378821 MTRQ99707 1265 aa21.07■□□□□ 0.96
TMEM88B-201ENST00000378821 TMEM60Q9H2L4 133 aa21.07■□□□□ 0.96
TMEM88B-201ENST00000378821 PCDHB2Q9Y5E7 798 aa21.07■□□□□ 0.96
TMEM88B-201ENST00000378821 MYH15Q9Y2K3 1946 aa21.06■□□□□ 0.96
TMEM88B-201ENST00000378821 MEIS3P2A8K0S8 358 aa21.06■□□□□ 0.96
TMEM88B-201ENST00000378821 ARL2P36404 184 aa21.06■□□□□ 0.96
TMEM88B-201ENST00000378821 TXKP42681 527 aa21.06■□□□□ 0.96
TMEM88B-201ENST00000378821 ALDH7A1P49419 539 aaKnown RBP21.06■□□□□ 0.96
TMEM88B-201ENST00000378821 PTENP60484 403 aa21.06■□□□□ 0.96
TMEM88B-201ENST00000378821 ORC2Q13416 577 aaPredicted RBP21.06■□□□□ 0.96
TMEM88B-201ENST00000378821 UBXN11Q5T124 520 aa21.06■□□□□ 0.96
TMEM88B-201ENST00000378821 RNF149Q8NC42 400 aa21.06■□□□□ 0.96
TMEM88B-201ENST00000378821 LPPQ93052 612 aa21.06■□□□□ 0.96
TMEM88B-201ENST00000378821 SNX21Q969T3 373 aa21.06■□□□□ 0.96
TMEM88B-201ENST00000378821 PGBD4Q96DM1 585 aa21.06■□□□□ 0.96
TMEM88B-201ENST00000378821 TCF25Q9BQ70 676 aa21.06■□□□□ 0.96
TMEM88B-201ENST00000378821 NFKBIZQ9BYH8 718 aa21.06■□□□□ 0.96
TMEM88B-201ENST00000378821 BARX2Q9UMQ3 279 aaPredicted RBP21.06■□□□□ 0.96
TMEM88B-201ENST00000378821 ARIH1Q9Y4X5 557 aaPredicted RBP21.06■□□□□ 0.96
TMEM88B-201ENST00000378821 HIDE1A8MVS5 230 aa21.05■□□□□ 0.96
TMEM88B-201ENST00000378821 H3BQV1 296 aa21.05■□□□□ 0.96
TMEM88B-201ENST00000378821 DGAT1O75907 488 aa21.05■□□□□ 0.96
TMEM88B-201ENST00000378821 SPATA31C1P0DKV0 1188 aa21.05■□□□□ 0.96
TMEM88B-201ENST00000378821 MCM7P33993 719 aa21.05■□□□□ 0.96
TMEM88B-201ENST00000378821 RARRES1P49788 294 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms