RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 ADAM22Q9P0K1 906 aa15.27■□□□□ 0.03
SHROOM1-203ENST00000378679 PPP2R3BQ9Y5P8 575 aa15.27■□□□□ 0.03
SHROOM1-203ENST00000378679 KRT81Q14533 505 aa15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 SNRNP35Q16560 246 aaKnown RBP15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 KCNK18Q7Z418 384 aa15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 HEXIM2Q96MH2 286 aaKnown RBP15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 FAM193BQ96PV7 902 aaPredicted RBP15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 MAP3K20Q9NYL2 800 aaKnown RBP15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 HDAC6Q9UBN7 1215 aa15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 CNOT8Q9UFF9 292 aaKnown RBP15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 SYNJ2BP-COX16A0A087WUM0 186 aa15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 PTPRAP18433 802 aa15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 DSG3P32926 999 aa15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 KCNJ6P48051 423 aa15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 ARHGEF6Q15052 776 aa15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 ZNF699Q32M78 642 aa15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 CPLX4Q7Z7G2 160 aa15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 RPUSD2Q8IZ73 545 aaKnown RBP15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 LRRC71Q8N4P6 559 aa15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 SNX25Q9H3E2 840 aa15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 PXMP2Q9NR77 195 aa15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 BLOC1S4Q9NUP1 217 aa15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 COX16Q9P0S2 106 aa15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 STIM2Q9P246 746 aa15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 LRRC37A3O60309 1634 aa15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 MEIS2O14770 477 aa15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 FTLP02792 175 aaPredicted RBP15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 TAB3Q8N5C8 712 aaPredicted RBP15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 ERGIC2Q96RQ1 377 aa15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 PTPN22Q9Y2R2 807 aa15.26■□□□□ 0.03
SHROOM1-203ENST00000378679 FAM237AA0A1B0GTK4 181 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 CYP2B6P20813 491 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 PMS1P54277 932 aaKnown RBP15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 TWF2Q6IBS0 349 aaKnown RBP15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 UHMK1Q8TAS1 419 aaKnown RBP15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 ANKRD7Q92527 254 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 MTMR9Q96QG7 549 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 PARK7Q99497 189 aaKnown RBP15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 AP1M1Q9BXS5 423 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 AGPAT3Q9NRZ7 376 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 FHOD1Q9Y613 1164 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 CCDC151A5D8V7 595 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 EIF3DO15371 548 aaKnown RBP eCLIP15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 PRKCBP05771 671 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 CTNNA1P35221 906 aaKnown RBP15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 SOX5P35711 763 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 PPFIA1Q13136 1202 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 NT5DC1Q5TFE4 455 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 CDKAL1Q5VV42 579 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 RSAD2Q8WXG1 361 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 PBKQ96KB5 322 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 CCT5P48643 541 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 DUOXA2Q1HG44 320 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 SPOUT1Q5T280 376 aaKnown RBP15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 PCNX4Q63HM2 1172 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 PPP1R21Q6ZMI0 780 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 RNF10Q8N5U6 811 aaKnown RBP15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 RDM1Q8NG50 284 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 OR6J1Q8NGC5 347 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 SCFD1Q8WVM8 642 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 TARS2Q9BW92 718 aaKnown RBP15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 NACA2Q9H009 215 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 TOPORSQ9NS56 1045 aaPredicted RBP15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 DAAM1Q9Y4D1 1078 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 FAM169AQ9Y6X4 670 aa15.25■□□□□ 0.03
SHROOM1-203ENST00000378679 ANO9A1A5B4 782 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 EML1O00423 815 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 MED7O43513 233 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 ZNF18P17022 549 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 CIITAP33076 1130 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 SLC7A5Q01650 507 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 OTOP1Q7RTM1 612 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 ERICH1Q86X53 443 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 ABI1Q8IZP0 508 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 KIAA0895Q8NCT3 520 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 C11orf70Q9BRQ4 267 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 SPATC1LQ9H0A9 340 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 MKRN1Q9UHC7 482 aaKnown RBP15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 ANAPC7Q9UJX3 599 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 CASP4P49662 377 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 GPC3P51654 580 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 GPC5P78333 572 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 MTMR3Q13615 1198 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 CEP85LQ5SZL2 805 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 MKNK1Q9BUB5 465 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 ADAM21Q9UKJ8 722 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 NCK2O43639 380 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 GNAT1P11488 350 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 SNX1Q13596 522 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 MUM1L1Q5H9M0 696 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 DENND2CQ68D51 928 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 OR6B2Q6IFH4 312 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 TMEM35BQ8NCS4 154 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 OR6B3Q8NGW1 331 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 TSNARE1Q96NA8 513 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 APEX2Q9UBZ4 518 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 SYNPO2Q9UMS6 1093 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 TTLL3Q9Y4R7 772 aa15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 MORC2Q9Y6X9 1032 aaPredicted RBP15.24■□□□□ 0.03
SHROOM1-203ENST00000378679 CYP26A1O43174 497 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms