RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 PP2D1A8MPX8 630 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 LAD1O00515 517 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 EOMESO95936 686 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 ITGB1P05556 798 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 SKIP12755 728 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 XRCC6P12956 609 aaKnown RBP eCLIP12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 LAG3P18627 525 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 GLRA2P23416 452 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 RAB27AP51159 221 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 KCNQ1P51787 676 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 NCBP1Q09161 790 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 TMEM132AQ24JP5 1023 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 NAALADL2Q58DX5 795 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 CLLU1OSQ5K130 101 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 PADI6Q6TGC4 694 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 COLGALT1Q8NBJ5 622 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 MCPH1Q8NEM0 835 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 MICAL1Q8TDZ2 1067 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 POF1BQ8WVV4 589 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 P2RX5Q93086 422 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 CASD1Q96PB1 797 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 IGFLR1Q9H665 355 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 DDX19AQ9NUU7 478 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 RNF19AQ9NV58 838 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 DBR1Q9UK59 544 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 STK24Q9Y6E0 443 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 FNDC1Q4ZHG4 1894 aaPredicted RBP12.84□□□□□ -0.35
SMARCE1-203ENST00000377808 XIRP2A4UGR9 3374 aa12.84□□□□□ -0.35
SMARCE1-203ENST00000377808 VWA3AA6NCI4 1184 aa12.84□□□□□ -0.35
SMARCE1-203ENST00000377808 ATF7P17544 494 aaPredicted RBP12.84□□□□□ -0.35
SMARCE1-203ENST00000377808 LIG1P18858 919 aa12.84□□□□□ -0.35
SMARCE1-203ENST00000377808 KCNA5P22460 613 aa12.84□□□□□ -0.35
SMARCE1-203ENST00000377808 CDC25AP30304 524 aa12.84□□□□□ -0.35
SMARCE1-203ENST00000377808 ARL2P36404 184 aa12.84□□□□□ -0.35
SMARCE1-203ENST00000377808 PBX3P40426 434 aa12.84□□□□□ -0.35
SMARCE1-203ENST00000377808 PTENP60484 403 aa12.84□□□□□ -0.35
SMARCE1-203ENST00000377808 ECM1Q16610 540 aa12.84□□□□□ -0.35
SMARCE1-203ENST00000377808 POTEHQ6S545 545 aa12.84□□□□□ -0.35
SMARCE1-203ENST00000377808 ZNF598Q86UK7 904 aaKnown RBP12.84□□□□□ -0.35
SMARCE1-203ENST00000377808 ADAMTS19Q8TE59 1207 aa12.84□□□□□ -0.35
SMARCE1-203ENST00000377808 PGBD4Q96DM1 585 aa12.84□□□□□ -0.35
SMARCE1-203ENST00000377808 CPB2Q96IY4 423 aa12.84□□□□□ -0.35
SMARCE1-203ENST00000377808 MRPL9Q9BYD2 267 aaKnown RBP12.84□□□□□ -0.35
SMARCE1-203ENST00000377808 BHMT2Q9H2M3 363 aa12.84□□□□□ -0.35
SMARCE1-203ENST00000377808 CWH43Q9H720 699 aa12.84□□□□□ -0.35
SMARCE1-203ENST00000377808 UBE2ZQ9H832 354 aaPredicted RBP12.84□□□□□ -0.35
SMARCE1-203ENST00000377808 CLDND1Q9NY35 253 aa12.84□□□□□ -0.35
SMARCE1-203ENST00000377808 PCDHB2Q9Y5E7 798 aa12.84□□□□□ -0.35
SMARCE1-203ENST00000377808 TSPAN1O60635 241 aa12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 FGF18O76093 207 aa12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 PDCP20941 246 aa12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 DNAJB1P25685 340 aa12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 CA8P35219 290 aa12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 PRPHP41219 470 aa12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 RNASELQ05823 741 aaKnown RBP12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 MBTD1Q05BQ5 628 aa12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 CUL4AQ13619 759 aa12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 PDIA5Q14554 519 aa12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 CSPP1Q1MSJ5 1256 aa12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 NOTUMQ6P988 496 aa12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 GLB1LQ6UWU2 654 aa12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 LRRC55Q6ZSA7 311 aa12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 ZBTB8OSQ8IWT0 167 aa12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 IGSF22Q8N9C0 903 aa12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 SPPL3Q8TCT6 385 aa12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 PPP2R3CQ969Q6 453 aa12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 CDK5RAP3Q96JB5 506 aa12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 ZNF558Q96NG5 402 aa12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 APOL6Q9BWW8 343 aa12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 TRIM6Q9C030 488 aaPredicted RBP12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 GBP3Q9H0R5 595 aa12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 DNM3Q9UQ16 869 aa12.83□□□□□ -0.36
SMARCE1-203ENST00000377808 TRANK1O15050 2925 aa12.82□□□□□ -0.36
SMARCE1-203ENST00000377808 MEIS3P2A8K0S8 358 aa12.82□□□□□ -0.36
SMARCE1-203ENST00000377808 E9PMD0 336 aa12.82□□□□□ -0.36
SMARCE1-203ENST00000377808 H3BQ06 376 aaPredicted RBP12.82□□□□□ -0.36
SMARCE1-203ENST00000377808 K7ELQ4 463 aaPredicted RBP12.82□□□□□ -0.36
SMARCE1-203ENST00000377808 ZC3H11AO75152 810 aaKnown RBP eCLIP12.82□□□□□ -0.36
SMARCE1-203ENST00000377808 SSBP05455 408 aaKnown RBP eCLIP12.82□□□□□ -0.36
SMARCE1-203ENST00000377808 MUTP22033 750 aa12.82□□□□□ -0.36
SMARCE1-203ENST00000377808 IRS1P35568 1242 aa12.82□□□□□ -0.36
SMARCE1-203ENST00000377808 ATP2C1P98194 919 aaPredicted RBP12.82□□□□□ -0.36
SMARCE1-203ENST00000377808 IL17AQ16552 155 aa12.82□□□□□ -0.36
SMARCE1-203ENST00000377808 PLPP4Q5VZY2 271 aa12.82□□□□□ -0.36
SMARCE1-203ENST00000377808 KCNT2Q6UVM3 1135 aa12.82□□□□□ -0.36
SMARCE1-203ENST00000377808 RBM23Q86U06 439 aaKnown RBP12.82□□□□□ -0.36
SMARCE1-203ENST00000377808 RASSF8Q8NHQ8 419 aa12.82□□□□□ -0.36
SMARCE1-203ENST00000377808 DEPTORQ8TB45 409 aa12.82□□□□□ -0.36
SMARCE1-203ENST00000377808 URGCPQ8TCY9 931 aa12.82□□□□□ -0.36
SMARCE1-203ENST00000377808 UHRF1Q96T88 793 aaPredicted RBP12.82□□□□□ -0.36
SMARCE1-203ENST00000377808 PLIN2Q99541 437 aa12.82□□□□□ -0.36
SMARCE1-203ENST00000377808 POLD4Q9HCU8 107 aa12.82□□□□□ -0.36
SMARCE1-203ENST00000377808 PUF60Q9UHX1 559 aaKnown RBP12.82□□□□□ -0.36
SMARCE1-203ENST00000377808 PCDHGC5Q9Y5F6 944 aa12.82□□□□□ -0.36
SMARCE1-203ENST00000377808 REV3LO60673 3130 aa12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 A0A0C4DFX4 3053 aa12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 NT5C1B-RDH14C9J2C7 533 aa12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 B4GALT5O43286 388 aa12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 ITGA4P13612 1032 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms