RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 SLC35C1Q96A29 364 aa12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 CRAMP1Q96RY5 1269 aa12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 ARHGEF10LQ9HCE6 1279 aa12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 BCS1LQ9Y276 419 aa12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 CDK5RAP2Q96SN8 1893 aa12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 IRS2Q9Y4H2 1338 aa12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 TCRBV7S2A1N4TA0A589 114 aa12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 EME2A4GXA9 379 aaPredicted RBP12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 SNX3O60493 162 aa12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 AUHQ13825 339 aaKnown RBP12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 GIT2Q14161 759 aa12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 LLGL1Q15334 1064 aa12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 CPNE8Q86YQ8 564 aa12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 SPDL1Q96EA4 605 aa12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 FAM210AQ96ND0 272 aa12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 TTC7AQ9ULT0 858 aaPredicted RBP12.41□□□□□ -0.42
TM9SF2-201ENST00000376387 CCDC169A6NNP5 214 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 TCP11X1B4DZS4 312 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 MAPK7Q13164 816 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 RIPK1Q13546 671 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 KNOP1Q1ED39 458 aaKnown RBP12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 CRELD2Q6UXH1 353 aaPredicted RBP12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 BARGINQ6ZT62 677 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 EXOC3L1Q86VI1 746 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 REEP2Q9BRK0 252 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 DHX36Q9H2U1 1008 aaKnown RBP12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 JMJD4Q9H9V9 463 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 ASTN1O14525 1302 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 SFI1A8K8P3 1242 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 TMEM110-MUSTN1A8MSY1 372 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 USP17L15C9J2P7 530 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 USP17L13C9JLJ4 530 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 USP17L11C9JVI0 530 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 USP17L18D6R9N7 530 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 USP17L22D6RA61 530 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 USP17L17D6RBQ6 530 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 USP17L19D6RCP7 530 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 USP17L20D6RJB6 530 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 OAS1P00973 400 aaKnown RBP12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 FAM163BP0C2L3 166 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 BTDP43251 543 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 CLK2P49760 499 aaKnown RBP12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 SLC8A3P57103 927 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 USP17L24Q0WX57 530 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 LONRF1Q17RB8 773 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 HYIQ5T013 277 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 USP17L6PQ6QN14 398 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 POP1Q99575 1024 aaKnown RBP12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 DDX23Q9BUQ8 820 aaKnown RBP12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 RTFDC1Q9BY42 306 aaPredicted RBP12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 SEPT11Q9NVA2 429 aaKnown RBP12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 PTPN22Q9Y2R2 807 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 NUB1Q9Y5A7 615 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 NR3C1P04150 777 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 VCAM1P19320 739 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 KSR1Q8IVT5 923 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 ADGRF4Q8IZF3 695 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 PRELID2Q8N945 189 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 CTNNAL1Q9UBT7 734 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 TRAF3IP3Q9Y228 551 aa12.4□□□□□ -0.42
TM9SF2-201ENST00000376387 RBM47A0AV96 593 aaKnown RBP12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 GH1P01241 217 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 ALADP13716 330 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 PEX19P40855 299 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 NPEPPSP55786 919 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 VPS36Q86VN1 386 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 CCDC25Q86WR0 208 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 CATSPER3Q86XQ3 398 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 FMNL3Q8IVF7 1028 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 TBC1D22AQ8WUA7 517 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 GPR88Q9GZN0 384 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 PCDHA3Q9Y5H8 950 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 UBAP1LF5GYI3 381 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 RIPK2O43353 540 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 BAG3O95817 575 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 SLURP2P0DP57 97 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 GALNTL6Q49A17 601 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 EPM2AIP1Q7L775 607 aaPredicted RBP12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 RFFLQ8WZ73 363 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 NT5C3AQ9H0P0 336 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 KIF9Q9HAQ2 790 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 NCANO14594 1321 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 CFAP73A6NFT4 308 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 AGTP01019 485 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 KCNJ1P48048 391 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 DRAP1Q14919 205 aaPredicted RBP12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 SPDYCQ5MJ68 293 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 COL23A1Q86Y22 540 aaPredicted RBP12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 FITM2Q8N6M3 262 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 GDAP1Q8TB36 358 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 CCDC134Q9H6E4 229 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 CPSF2Q9P2I0 782 aaKnown RBP12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 ZNF652Q9Y2D9 606 aa12.39□□□□□ -0.43
TM9SF2-201ENST00000376387 USP17L10C9JJH3 530 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 COG2Q14746 738 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 C6orf118Q5T5N4 469 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 PPP4R3CPQ6ZMV5 832 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 SEPT14Q6ZU15 432 aa12.38□□□□□ -0.43
TM9SF2-201ENST00000376387 SAPCD2Q86UD0 394 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms