RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 C16orf59Q7L2K0 433 aa16.82■□□□□ 0.28
PFDN6-202ENST00000374607 FAM228AQ86W67 206 aa16.82■□□□□ 0.28
PFDN6-202ENST00000374607 CCDC65Q8IXS2 484 aa16.82■□□□□ 0.28
PFDN6-202ENST00000374607 TDHQ8IZJ6 230 aa16.82■□□□□ 0.28
PFDN6-202ENST00000374607 TMEM40Q8WWA1 233 aa16.82■□□□□ 0.28
PFDN6-202ENST00000374607 IFT122Q9HBG6 1241 aa16.82■□□□□ 0.28
PFDN6-202ENST00000374607 MYMKA6NI61 221 aa16.81■□□□□ 0.28
PFDN6-202ENST00000374607 H0YCG3 227 aa16.81■□□□□ 0.28
PFDN6-202ENST00000374607 K7ERI5 159 aa16.81■□□□□ 0.28
PFDN6-202ENST00000374607 ZNF202O95125 648 aa16.81■□□□□ 0.28
PFDN6-202ENST00000374607 AMHP03971 560 aa16.81■□□□□ 0.28
PFDN6-202ENST00000374607 SLFN14P0C7P3 912 aa16.81■□□□□ 0.28
PFDN6-202ENST00000374607 EFNA5P52803 228 aa16.81■□□□□ 0.28
PFDN6-202ENST00000374607 PCBP1Q15365 356 aaKnown RBP eCLIP16.81■□□□□ 0.28
PFDN6-202ENST00000374607 MAPK6Q16659 721 aa16.81■□□□□ 0.28
PFDN6-202ENST00000374607 C9orf50Q5SZB4 431 aa16.81■□□□□ 0.28
PFDN6-202ENST00000374607 BSNDQ8WZ55 320 aa16.81■□□□□ 0.28
PFDN6-202ENST00000374607 HERVK_113Q902F9 699 aa16.81■□□□□ 0.28
PFDN6-202ENST00000374607 OSBPL7Q9BZF2 842 aa16.81■□□□□ 0.28
PFDN6-202ENST00000374607 GOLPH3LQ9H4A5 285 aa16.81■□□□□ 0.28
PFDN6-202ENST00000374607 ERVK-5Q9HDB9 667 aa16.81■□□□□ 0.28
PFDN6-202ENST00000374607 HOOK1Q9UJC3 728 aaKnown RBP16.81■□□□□ 0.28
PFDN6-202ENST00000374607 PIN4Q9Y237 131 aaKnown RBP16.81■□□□□ 0.28
PFDN6-202ENST00000374607 HPSEQ9Y251 543 aa16.81■□□□□ 0.28
PFDN6-202ENST00000374607 RANBP2P49792 3224 aaKnown RBP16.81■□□□□ 0.28
PFDN6-202ENST00000374607 PHLPP2Q6ZVD8 1323 aa16.8■□□□□ 0.28
PFDN6-202ENST00000374607 NPTX2P47972 431 aa16.8■□□□□ 0.28
PFDN6-202ENST00000374607 UBE2HP62256 183 aa16.8■□□□□ 0.28
PFDN6-202ENST00000374607 STRN3Q13033 797 aa16.8■□□□□ 0.28
PFDN6-202ENST00000374607 LONRF3Q496Y0 759 aa16.8■□□□□ 0.28
PFDN6-202ENST00000374607 HERC4Q5GLZ8 1057 aaPredicted RBP16.8■□□□□ 0.28
PFDN6-202ENST00000374607 TWF2Q6IBS0 349 aaKnown RBP16.8■□□□□ 0.28
PFDN6-202ENST00000374607 KANK3Q6NY19 840 aa16.8■□□□□ 0.28
PFDN6-202ENST00000374607 FAM43BQ6ZT52 329 aaPredicted RBP16.8■□□□□ 0.28
PFDN6-202ENST00000374607 FAM178BQ8IXR5 827 aa16.8■□□□□ 0.28
PFDN6-202ENST00000374607 MYOCDQ8IZQ8 938 aa16.8■□□□□ 0.28
PFDN6-202ENST00000374607 CCDC47Q96A33 483 aaKnown RBP16.8■□□□□ 0.28
PFDN6-202ENST00000374607 ZBED2Q9BTP6 218 aa16.8■□□□□ 0.28
PFDN6-202ENST00000374607 KIFC3Q9BVG8 833 aa16.8■□□□□ 0.28
PFDN6-202ENST00000374607 NFKBIZQ9BYH8 718 aa16.8■□□□□ 0.28
PFDN6-202ENST00000374607 PANK4Q9NVE7 773 aa16.8■□□□□ 0.28
PFDN6-202ENST00000374607 PRMT7Q9NVM4 692 aaPredicted RBP16.8■□□□□ 0.28
PFDN6-202ENST00000374607 KBTBD4Q9NVX7 518 aa16.8■□□□□ 0.28
PFDN6-202ENST00000374607 DACT1Q9NYF0 836 aa16.8■□□□□ 0.28
PFDN6-202ENST00000374607 LRFN2Q9ULH4 789 aa16.8■□□□□ 0.28
PFDN6-202ENST00000374607 K7ENM7 598 aa16.79■□□□□ 0.28
PFDN6-202ENST00000374607 SLC16A4O15374 487 aa16.79■□□□□ 0.28
PFDN6-202ENST00000374607 TRAK2O60296 914 aa16.79■□□□□ 0.28
PFDN6-202ENST00000374607 KINO60870 393 aaKnown RBP16.79■□□□□ 0.28
PFDN6-202ENST00000374607 SLC34A2O95436 690 aa16.79■□□□□ 0.28
PFDN6-202ENST00000374607 PRKCBP05771 671 aa16.79■□□□□ 0.28
PFDN6-202ENST00000374607 GAP43P17677 238 aa16.79■□□□□ 0.28
PFDN6-202ENST00000374607 FAM160A1Q05DH4 1040 aa16.79■□□□□ 0.28
PFDN6-202ENST00000374607 DAW1Q8N136 415 aa16.79■□□□□ 0.28
PFDN6-202ENST00000374607 TMEM87AQ8NBN3 555 aa16.79■□□□□ 0.28
PFDN6-202ENST00000374607 SLC17A8Q8NDX2 589 aa16.79■□□□□ 0.28
PFDN6-202ENST00000374607 PAGE5Q96GU1 130 aa16.79■□□□□ 0.28
PFDN6-202ENST00000374607 ADAM2Q99965 735 aa16.79■□□□□ 0.28
PFDN6-202ENST00000374607 MRPL44Q9H9J2 332 aaKnown RBP16.79■□□□□ 0.28
PFDN6-202ENST00000374607 CHST12Q9NRB3 414 aa16.79■□□□□ 0.28
PFDN6-202ENST00000374607 SIP14410 1827 aa16.78■□□□□ 0.28
PFDN6-202ENST00000374607 FAM237AA0A1B0GTK4 181 aa16.78■□□□□ 0.28
PFDN6-202ENST00000374607 A0A1W2PPC1 479 aa16.78■□□□□ 0.28
PFDN6-202ENST00000374607 ACTN4O43707 911 aaKnown RBP16.78■□□□□ 0.28
PFDN6-202ENST00000374607 GADD45BO75293 160 aaPredicted RBP16.78■□□□□ 0.28
PFDN6-202ENST00000374607 UPP2O95045 317 aa16.78■□□□□ 0.28
PFDN6-202ENST00000374607 ATP2A2P16615 1042 aaKnown RBP16.78■□□□□ 0.28
PFDN6-202ENST00000374607 AXLP30530 894 aa16.78■□□□□ 0.28
PFDN6-202ENST00000374607 ABCD1P33897 745 aa16.78■□□□□ 0.28
PFDN6-202ENST00000374607 FXR1P51114 621 aaKnown RBP eCLIP16.78■□□□□ 0.28
PFDN6-202ENST00000374607 WDR5P61964 334 aaKnown RBP16.78■□□□□ 0.28
PFDN6-202ENST00000374607 MBTD1Q05BQ5 628 aa16.78■□□□□ 0.28
PFDN6-202ENST00000374607 MAPK7Q13164 816 aa16.78■□□□□ 0.28
PFDN6-202ENST00000374607 PRPF4BQ13523 1007 aaKnown RBP16.78■□□□□ 0.28
PFDN6-202ENST00000374607 CDCA2Q69YH5 1023 aaPredicted RBP16.78■□□□□ 0.28
PFDN6-202ENST00000374607 KRBA2Q6ZNG9 492 aa16.78■□□□□ 0.28
PFDN6-202ENST00000374607 GRAMD1CQ8IYS0 662 aa16.78■□□□□ 0.28
PFDN6-202ENST00000374607 SPIRE2Q8WWL2 714 aa16.78■□□□□ 0.28
PFDN6-202ENST00000374607 BICD1Q96G01 975 aa16.78■□□□□ 0.28
PFDN6-202ENST00000374607 SLC9A7Q96T83 725 aa16.78■□□□□ 0.28
PFDN6-202ENST00000374607 C7orf25Q9BPX7 421 aa16.78■□□□□ 0.28
PFDN6-202ENST00000374607 TRIM9Q9C026 710 aa16.78■□□□□ 0.28
PFDN6-202ENST00000374607 TRIM6Q9C030 488 aaPredicted RBP16.78■□□□□ 0.28
PFDN6-202ENST00000374607 BLZF1Q9H2G9 400 aa16.78■□□□□ 0.28
PFDN6-202ENST00000374607 MINDY3Q9H8M7 445 aa16.78■□□□□ 0.28
PFDN6-202ENST00000374607 C1orf112Q9NSG2 853 aa16.78■□□□□ 0.28
PFDN6-202ENST00000374607 SEL1LQ9UBV2 794 aa16.78■□□□□ 0.28
PFDN6-202ENST00000374607 ENPP3O14638 875 aa16.77■□□□□ 0.28
PFDN6-202ENST00000374607 STAG3L1P0CL83 205 aa16.77■□□□□ 0.28
PFDN6-202ENST00000374607 MATR3P43243 847 aaKnown RBP eCLIP16.77■□□□□ 0.28
PFDN6-202ENST00000374607 FAM117BQ6P1L5 589 aa16.77■□□□□ 0.28
PFDN6-202ENST00000374607 NOTUMQ6P988 496 aa16.77■□□□□ 0.28
PFDN6-202ENST00000374607 STXBP4Q6ZWJ1 553 aa16.77■□□□□ 0.28
PFDN6-202ENST00000374607 APBB1IPQ7Z5R6 666 aaPredicted RBP16.77■□□□□ 0.28
PFDN6-202ENST00000374607 SFR1Q86XK3 245 aa16.77■□□□□ 0.28
PFDN6-202ENST00000374607 IFNLR1Q8IU57 520 aaPredicted RBP16.77■□□□□ 0.28
PFDN6-202ENST00000374607 CPB2Q96IY4 423 aa16.77■□□□□ 0.28
PFDN6-202ENST00000374607 PRIMPOLQ96LW4 560 aa16.77■□□□□ 0.28
PFDN6-202ENST00000374607 TMX1Q9H3N1 280 aa16.77■□□□□ 0.28
PFDN6-202ENST00000374607 AGPAT5Q9NUQ2 364 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms