RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 LIN9Q5TKA1 542 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 TMEM270Q6UE05 265 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 MSTO1Q9BUK6 570 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 APOL6Q9BWW8 343 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 ADAM33Q9BZ11 813 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 KLHL11Q9NVR0 708 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 APEX2Q9UBZ4 518 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 CNOT8Q9UFF9 292 aaKnown RBP12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 SALL4Q9UJQ4 1053 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 NOVA2Q9UNW9 492 aaKnown RBP12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 ROBO3Q96MS0 1386 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 ZNF233A6NK53 670 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 KCNJ1P48048 391 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 MTM1Q13496 603 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 NAB2Q15742 525 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 CBWD6Q4V339 395 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 CBWD3Q5JTY5 395 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 CBWD5Q5RIA9 395 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 DENND2CQ68D51 928 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 DLK2Q6UY11 383 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 ZNF720Q7Z2F6 126 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 DHX38Q92620 1227 aaKnown RBP12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 EXOC4Q96A65 974 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 TLR10Q9BXR5 811 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 VCAM1P19320 739 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 MEA1Q16626 185 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 ETNPPLQ8TBG4 499 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 CPA5Q8WXQ8 436 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 SLC35C1Q96A29 364 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 POLR3CQ9BUI4 534 aaPredicted RBP12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 KCND1Q9NSA2 647 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 TBK1Q9UHD2 729 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 MYH13Q9UKX3 1938 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 PLSCR1O15162 318 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 DLG4P78352 724 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 SNRNP35Q16560 246 aaKnown RBP12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 PAPD7Q5XG87 772 aaKnown RBP12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 MIS18BP1Q6P0N0 1132 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 MKL1Q969V6 931 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 SPEF2Q9C093 1822 aa12.73□□□□□ -0.37
PACSIN1-202ENST00000374043 MYO5AQ9Y4I1 1855 aaKnown RBP12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 GLI1P08151 1106 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 TMEM191BP0C7N4 346 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 ITGA4P13612 1032 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 DR1Q01658 176 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 Q3C1V9 767 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 SYTL5Q8TDW5 730 aaPredicted RBP12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 C1orf54Q8WWF1 131 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 BAP1Q92560 729 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 RAB17Q9H0T7 212 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 PHLPP1O60346 1717 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 DUOX1Q9NRD9 1551 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 WDR46O15213 610 aaKnown RBP12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 ICAM1P05362 532 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 ITGB5P18084 799 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 Q4G0T1 1027 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 CYP4F22Q6NT55 531 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 ARFGAP2Q8N6H7 521 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 MLXIPLQ9NP71 852 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 HPCAL4Q9UM19 191 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 ATP9AO75110 1047 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 ACSL3O95573 720 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 KRT76Q01546 638 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 ZNF280CQ8ND82 737 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 PBKQ96KB5 322 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 MPHOSPH6Q99547 160 aaKnown RBP12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 AGPAT1Q99943 283 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 NUP85Q9BW27 656 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 EDEM3Q9BZQ6 932 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 SEL1LQ9UBV2 794 aa12.72□□□□□ -0.37
PACSIN1-202ENST00000374043 RGS16O15492 202 aaPredicted RBP12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 CSDE1O75534 798 aaKnown RBP12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 ZRANB2O95218 330 aaKnown RBP eCLIP12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 EGFRP00533 1210 aa12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 CNGA1P29973 690 aa12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 SEMA3FQ13275 785 aa12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 SPDYE2Q495Y8 402 aa12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 SGO2Q562F6 1265 aa12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 SIAH1Q8IUQ4 282 aa12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 FMNL3Q8IVF7 1028 aa12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 RNPC3Q96LT9 517 aaKnown RBP12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 P2RX7Q99572 595 aaKnown RBP12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 STK33Q9BYT3 514 aa12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 JPH1Q9HDC5 661 aaPredicted RBP12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 LAMB4A4D0S4 1761 aa12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 GRID2IPA4D2P6 1211 aa12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 TLR2O60603 784 aa12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 TRADDQ15628 312 aa12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 FIGNQ5HY92 759 aa12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 SESTD1Q86VW0 696 aa12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 RNF25Q96BH1 459 aaPredicted RBP12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 ELP3Q9H9T3 547 aa12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 IVNS1ABPQ9Y6Y0 642 aa12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 NUP188Q5SRE5 1749 aa12.71□□□□□ -0.37
PACSIN1-202ENST00000374043 IGKV6D-41A0A0C4DH26 115 aa12.71□□□□□ -0.38
PACSIN1-202ENST00000374043 SGPL1O95470 568 aa12.71□□□□□ -0.38
PACSIN1-202ENST00000374043 GBP2P32456 591 aaPredicted RBP12.71□□□□□ -0.38
PACSIN1-202ENST00000374043 GUCY1A3Q02108 690 aa12.71□□□□□ -0.38
PACSIN1-202ENST00000374043 KCTD2Q14681 263 aa12.71□□□□□ -0.38
PACSIN1-202ENST00000374043 SUPT20HL1Q3ZLR7 823 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms