RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 ABHD8Q96I13 439 aa16.42■□□□□ 0.22
SRPK1-204ENST00000373825 MYLK2Q9H1R3 596 aa16.42■□□□□ 0.22
SRPK1-204ENST00000373825 ANKFY1Q9P2R3 1169 aa16.42■□□□□ 0.22
SRPK1-204ENST00000373825 SYNGAP1Q96PV0 1343 aa16.42■□□□□ 0.22
SRPK1-204ENST00000373825 KRT36O76013 467 aa16.42■□□□□ 0.22
SRPK1-204ENST00000373825 STMN1P16949 149 aa16.42■□□□□ 0.22
SRPK1-204ENST00000373825 TRAPPC10P48553 1259 aa16.42■□□□□ 0.22
SRPK1-204ENST00000373825 TCIRG1Q13488 830 aa16.42■□□□□ 0.22
SRPK1-204ENST00000373825 LZICQ8WZA0 190 aa16.42■□□□□ 0.22
SRPK1-204ENST00000373825 CNOT8Q9UFF9 292 aaKnown RBP16.42■□□□□ 0.22
SRPK1-204ENST00000373825 ARHGAP26Q9UNA1 814 aa16.42■□□□□ 0.22
SRPK1-204ENST00000373825 DNM3Q9UQ16 869 aa16.42■□□□□ 0.22
SRPK1-204ENST00000373825 PAX3P23760 479 aa16.42■□□□□ 0.22
SRPK1-204ENST00000373825 TFAP4Q01664 338 aa16.42■□□□□ 0.22
SRPK1-204ENST00000373825 ZNF496Q96IT1 587 aaPredicted RBP16.42■□□□□ 0.22
SRPK1-204ENST00000373825 TBC1D10AQ9BXI6 508 aa16.42■□□□□ 0.22
SRPK1-204ENST00000373825 TRPV6Q9H1D0 765 aa16.42■□□□□ 0.22
SRPK1-204ENST00000373825 KIAA1024Q9UPX6 916 aa16.42■□□□□ 0.22
SRPK1-204ENST00000373825 RBMX2Q9Y388 322 aaKnown RBP16.42■□□□□ 0.22
SRPK1-204ENST00000373825 SAMD9LQ8IVG5 1584 aa16.42■□□□□ 0.22
SRPK1-204ENST00000373825 ATXN2Q99700 1313 aaKnown RBP16.41■□□□□ 0.22
SRPK1-204ENST00000373825 LOC100653049A0A140TA62 436 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 O00370 1275 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 KRT34O76011 436 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 KCNH2Q12809 1159 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 NAB2Q15742 525 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 RARS2Q5T160 578 aaKnown RBP16.41■□□□□ 0.22
SRPK1-204ENST00000373825 LIN9Q5TKA1 542 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 TMC3Q7Z5M5 1100 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 ZBTB46Q86UZ6 589 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 COL23A1Q86Y22 540 aaPredicted RBP16.41■□□□□ 0.22
SRPK1-204ENST00000373825 FAM81BQ96LP2 452 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 MRPL1Q9BYD6 325 aaKnown RBP16.41■□□□□ 0.22
SRPK1-204ENST00000373825 PCDHA12Q9UN75 941 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 UGGT1Q9NYU2 1555 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 CPSF1Q10570 1443 aaKnown RBP16.41■□□□□ 0.22
SRPK1-204ENST00000373825 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.41■□□□□ 0.22
SRPK1-204ENST00000373825 ZBED4O75132 1171 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 MAPK4P31152 587 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 DYNLT1P63172 113 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 ERLEC1Q96DZ1 483 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 ZNF609O15014 1411 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 MYL1P05976 194 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 PATL1Q86TB9 770 aaKnown RBP16.41■□□□□ 0.22
SRPK1-204ENST00000373825 TMEM110Q86TL2 294 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 HEATR4Q86WZ0 1026 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 E7ENQ6 273 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 POLGP54098 1239 aaPredicted RBP16.41■□□□□ 0.22
SRPK1-204ENST00000373825 DHX34Q14147 1143 aaKnown RBP16.41■□□□□ 0.22
SRPK1-204ENST00000373825 RBM26Q5T8P6 1007 aaKnown RBP16.41■□□□□ 0.22
SRPK1-204ENST00000373825 SPATA5Q8NB90 893 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 GIMAP4Q9NUV9 329 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 NDUFA13Q9P0J0 144 aa16.41■□□□□ 0.22
SRPK1-204ENST00000373825 NEDD4P46934 1319 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 SSU72P8A0A1W2PR75 194 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 ACTN1P12814 892 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 PTPN4P29074 926 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 USP11P51784 963 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 KRT17Q04695 432 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 LRRC63Q05C16 580 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 TSSK1BQ9BXA7 367 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 GDF3Q9NR23 364 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 NMRK1Q9NWW6 199 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 DENND2AQ9ULE3 1009 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 LIN7AO14910 233 aaPredicted RBP16.4■□□□□ 0.22
SRPK1-204ENST00000373825 AP1B1Q10567 949 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 ART3Q13508 389 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 RIPK1Q13546 671 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 MTHFD1LQ6UB35 978 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 RNF169Q8NCN4 708 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 UCMAQ8WVF2 138 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 ADGRL3Q9HAR2 1447 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 PDS5AQ29RF7 1337 aaKnown RBP16.4■□□□□ 0.22
SRPK1-204ENST00000373825 GYS1P13807 737 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 GFAPP14136 432 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 MAP4P27816 1152 aaKnown RBP16.4■□□□□ 0.22
SRPK1-204ENST00000373825 CYP4A11Q02928 519 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 PLBD2Q8NHP8 589 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 SLC13A1Q9BZW2 595 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 EMILIN3Q9NT22 766 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.4■□□□□ 0.223e-8■■□□□ 13.9
SRPK1-204ENST00000373825 PKD2L1Q9P0L9 805 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 APOBEC2Q9Y235 224 aaKnown RBP16.4■□□□□ 0.22
SRPK1-204ENST00000373825 IRS4O14654 1257 aaPredicted RBP16.4■□□□□ 0.22
SRPK1-204ENST00000373825 HNRNPCL1O60812 293 aaKnown RBP16.4■□□□□ 0.22
SRPK1-204ENST00000373825 CCR3P51677 355 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 BASP1P80723 227 aaKnown RBP16.4■□□□□ 0.22
SRPK1-204ENST00000373825 ANO4Q32M45 955 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 LVRNQ6Q4G3 990 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 FAM118BQ9BPY3 351 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 GRIP2Q9C0E4 1043 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 ARHGEF38Q9NXL2 777 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 CHORDC1Q9UHD1 332 aaPredicted RBP16.4■□□□□ 0.22
SRPK1-204ENST00000373825 CCPG1Q9ULG6 757 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 SH3GLB1Q9Y371 365 aa16.4■□□□□ 0.22
SRPK1-204ENST00000373825 FANCAO15360 1455 aa16.39■□□□□ 0.21
SRPK1-204ENST00000373825 IQCA1LA6NCM1 817 aa16.39■□□□□ 0.21
SRPK1-204ENST00000373825 COPEO14579 308 aa16.39■□□□□ 0.21
SRPK1-204ENST00000373825 SAT1P21673 171 aa16.39■□□□□ 0.21
SRPK1-204ENST00000373825 PHKA1P46020 1223 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms