RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ANKRD20A1Q5TYW2 823 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 OR6B2Q6IFH4 312 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 EMBQ6PCB8 327 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 SAMD7Q7Z3H4 446 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 RYBPQ8N488 228 aaPredicted RBP14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 GCOM2Q9BZD3 368 aaPredicted RBP14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 KIAA1586Q9HCI6 787 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 CPSF3Q9UKF6 684 aaKnown RBP14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 COPG1Q9Y678 874 aaKnown RBP14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 CUL4BQ13620 913 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 PRAMEF18Q5VWM3 479 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 SCYL3Q8IZE3 742 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 TEX13BQ9BXU2 312 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 SAMSN1Q9NSI8 373 aaKnown RBP14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 ST13P50502 369 aaKnown RBP14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 USP11P51784 963 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 PLTPP55058 493 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 RESP18Q5W5W9 173 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 UNC13DQ70J99 1090 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 CDKL2Q92772 493 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 NYAP2Q9P242 653 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 PCDHA13Q9Y5I0 950 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 ECEL1O95672 775 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 PTPN21Q16825 1174 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 DNAJC24Q6P3W2 148 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 C4orf50Q6ZRC1 276 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 MMS22LQ6ZRQ5 1243 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 ELMOD1Q8N336 334 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 CCHCR1Q8TD31 782 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 OXER1Q8TDS5 423 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 DEFB129Q9H1M3 183 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 SLC9A2Q9UBY0 812 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 IPO11Q9UI26 975 aaKnown RBP14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 KDM1AO60341 852 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 GFPT2O94808 682 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 TXNP10599 105 aaKnown RBP14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 NBPF9Q3BBW0 867 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 TTBK2Q6IQ55 1244 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 CEMIPQ8WUJ3 1361 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 CCL15-CCL14A0A0B4J2E2 113 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 CCL15Q16663 113 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 STAG2Q8N3U4 1231 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 SCYL1Q96KG9 808 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 A0A1B0GW55 424 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 MYO1CO00159 1063 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 DUX4L2P0CJ85 424 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 DUX4L3P0CJ86 424 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 DUX4L4P0CJ87 422 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 DUX4L5P0CJ88 424 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 DUX4L6P0CJ89 424 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 DUX4L7P0CJ90 424 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 CUL1Q13616 776 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 LRGUKQ96M69 825 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 MRPL47Q9HD33 250 aaKnown RBP14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 DUX4Q9UBX2 424 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 A0A087WWV3 80 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 KBTBD13C9JR72 458 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 SKIP12755 728 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 YWHAGP61981 247 aaKnown RBP eCLIP14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 PDIA6Q15084 440 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 ZNF667Q5HYK9 610 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 C9orf131Q5VYM1 1079 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 POLR3FQ9H1D9 316 aaPredicted RBP14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 NOVA2Q9UNW9 492 aaKnown RBP14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 SERPING1P05155 500 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 C16orf86Q6ZW13 317 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 CCDC80Q76M96 950 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 MB21D1Q8N884 522 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 BEST2Q8NFU1 509 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 TMEM39BQ9GZU3 492 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 GMEB1Q9Y692 573 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 SLC16A4O15374 487 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 MAP3K7O43318 606 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 MX2P20592 715 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 TADA2BQ86TJ2 420 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 SFR1Q86XK3 245 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 ANKRD13AQ8IZ07 590 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 GJB4Q9NTQ9 266 aa14.23□□□□□ -0.13
RAPGEF1-201ENST00000372189 GPC3P51654 580 aa14.22□□□□□ -0.13
RAPGEF1-201ENST00000372189 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.22□□□□□ -0.13
RAPGEF1-201ENST00000372189 FAM133AQ8N9E0 248 aa14.22□□□□□ -0.13
RAPGEF1-201ENST00000372189 GOLGA8CPA6NN73 597 aa14.22□□□□□ -0.13
RAPGEF1-201ENST00000372189 CXCR5P32302 372 aa14.22□□□□□ -0.13
RAPGEF1-201ENST00000372189 ARL4AP40617 200 aa14.22□□□□□ -0.13
RAPGEF1-201ENST00000372189 INAQ16352 499 aa14.22□□□□□ -0.13
RAPGEF1-201ENST00000372189 SGMS1Q86VZ5 419 aa14.22□□□□□ -0.13
RAPGEF1-201ENST00000372189 LXNQ9BS40 222 aa14.22□□□□□ -0.13
RAPGEF1-201ENST00000372189 ANAPC5Q9UJX4 755 aa14.22□□□□□ -0.13
RAPGEF1-201ENST00000372189 GDAQ9Y2T3 454 aa14.22□□□□□ -0.13
RAPGEF1-201ENST00000372189 MFAP3LO75121 409 aa14.22□□□□□ -0.13
RAPGEF1-201ENST00000372189 FTCDO95954 541 aa14.22□□□□□ -0.13
RAPGEF1-201ENST00000372189 SRGAP2BP0DMP2 458 aa14.22□□□□□ -0.13
RAPGEF1-201ENST00000372189 EIF4A3P38919 411 aaKnown RBP14.22□□□□□ -0.13
RAPGEF1-201ENST00000372189 DMPKQ09013 629 aa14.22□□□□□ -0.13
RAPGEF1-201ENST00000372189 RCN2Q14257 317 aa14.22□□□□□ -0.13
RAPGEF1-201ENST00000372189 TMED2Q15363 201 aa14.22□□□□□ -0.13
RAPGEF1-201ENST00000372189 ZNF579Q8NAF0 562 aaKnown RBP14.22□□□□□ -0.13
RAPGEF1-201ENST00000372189 SDCCAG3Q96C92 435 aa14.22□□□□□ -0.13
RAPGEF1-201ENST00000372189 PRDM5Q9NQX1 630 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms