RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 ECM1Q16610 540 aa12.26□□□□□ -0.45
EXOSC1-202ENST00000370885 AMHR2Q16671 573 aa12.26□□□□□ -0.45
EXOSC1-202ENST00000370885 AGMOQ6ZNB7 445 aa12.26□□□□□ -0.45
EXOSC1-202ENST00000370885 CATSPER4Q7RTX7 472 aa12.26□□□□□ -0.45
EXOSC1-202ENST00000370885 CATSPER3Q86XQ3 398 aa12.26□□□□□ -0.45
EXOSC1-202ENST00000370885 BCL7CQ8WUZ0 217 aaPredicted RBP12.26□□□□□ -0.45
EXOSC1-202ENST00000370885 SLC7A3Q8WY07 619 aa12.26□□□□□ -0.45
EXOSC1-202ENST00000370885 ZSCAN31Q96LW9 406 aaPredicted RBP12.26□□□□□ -0.45
EXOSC1-202ENST00000370885 C11orf16Q9NQ32 467 aa12.26□□□□□ -0.45
EXOSC1-202ENST00000370885 CHST12Q9NRB3 414 aa12.26□□□□□ -0.45
EXOSC1-202ENST00000370885 AGPAT5Q9NUQ2 364 aa12.26□□□□□ -0.45
EXOSC1-202ENST00000370885 FAM105AQ9NUU6 356 aa12.26□□□□□ -0.45
EXOSC1-202ENST00000370885 PCDHB12Q9Y5F1 795 aa12.26□□□□□ -0.45
EXOSC1-202ENST00000370885 MBTPS2O43462 519 aa12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 DKC1O60832 514 aaKnown RBP eCLIP12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 ZNF623O75123 536 aa12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 OFD1O75665 1012 aa12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 LAG3P18627 525 aa12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 SFPQP23246 707 aaKnown RBP eCLIP12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 GLRA2P23416 452 aa12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 ARL2P36404 184 aa12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 TECP42680 631 aa12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 CDC42EP1Q00587 391 aa12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 PLCB3Q01970 1234 aa12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 CAPSQ13938 189 aa12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 KCNC3Q14003 757 aa12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 TWF2Q6IBS0 349 aaKnown RBP12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 OTUD6AQ7L8S5 288 aa12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 ZNF280BQ86YH2 543 aa12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 THNSL1Q8IYQ7 743 aa12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 SLC39A11Q8N1S5 342 aa12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 EFHBQ8N7U6 833 aa12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 RNF149Q8NC42 400 aa12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 SMG8Q8ND04 991 aaKnown RBP12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 FEZF2Q8TBJ5 459 aa12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 PSPC1Q8WXF1 523 aaKnown RBP12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 MRPS27Q92552 414 aaKnown RBP12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 JPH2Q9BR39 696 aaPredicted RBP12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 RNF39Q9H2S5 420 aa12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 FOXP1Q9H334 677 aaPredicted RBP12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 GPRC5CQ9NQ84 441 aa12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 TLR9Q9NR96 1032 aa12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 ANKEF1Q9NU02 776 aa12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 BARX2Q9UMQ3 279 aaPredicted RBP12.25□□□□□ -0.45
EXOSC1-202ENST00000370885 TTLL13PA6NNM8 815 aa12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 BCAR1P56945 870 aa12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 PTENP60484 403 aa12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 ZP2Q05996 745 aa12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 IL17AQ16552 155 aa12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 PLPP4Q5VZY2 271 aa12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 SRGAP1Q7Z6B7 1085 aa12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 MRPL10Q7Z7H8 261 aaKnown RBP12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 NOSTRINQ8IVI9 506 aa12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 GJD3Q8N144 294 aa12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 LRRC43Q8N309 656 aa12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 CPB2Q96IY4 423 aa12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 MTRQ99707 1265 aa12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 VN1R3Q9BXE9 311 aa12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 EIF2AQ9BY44 585 aaKnown RBP12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 INO80BQ9C086 356 aaPredicted RBP12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 NRDE2Q9H7Z3 1164 aa12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 POLD4Q9HCU8 107 aa12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 SH2B1Q9NRF2 756 aaPredicted RBP12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 AAASQ9NRG9 546 aa12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 TBC1D13Q9NVG8 400 aa12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 DACT1Q9NYF0 836 aa12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 DNAJB4Q9UDY4 337 aa12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 PPME1Q9Y570 386 aa12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 PCDHB6Q9Y5E3 794 aa12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 PCDHB2Q9Y5E7 798 aa12.24□□□□□ -0.45
EXOSC1-202ENST00000370885 C19orf67A6NJJ6 358 aa12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 B4GALT5O43286 388 aa12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 HOXA2O43364 376 aa12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 NCK2O43639 380 aa12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 TSPAN1O60635 241 aa12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 DDHD2O94830 711 aa12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 EYA4O95677 639 aa12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 OR52Z1P0C646 297 aa12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 U2AF2P26368 475 aaKnown RBP eCLIP12.23□□□□□ -0.454e-7■■■□□ 15.2
EXOSC1-202ENST00000370885 HMGN5P82970 282 aaKnown RBP12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 UBE3AQ05086 875 aa12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 MBTD1Q05BQ5 628 aa12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 SAFBQ15424 915 aaKnown RBP eCLIP12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 SMAD2Q15796 467 aaKnown RBP12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 DUSP6Q16828 381 aa12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 TTC38Q5R3I4 469 aa12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 POTEGQ6S5H5 508 aa12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 MAEAQ7L5Y9 396 aa12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 CDR2LQ86X02 465 aaPredicted RBP12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 IFNLR1Q8IU57 520 aaPredicted RBP12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 ABI1Q8IZP0 508 aa12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 MICAL1Q8TDZ2 1067 aa12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 BSNDQ8WZ55 320 aa12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 TMX3Q96JJ7 454 aa12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 ZNF558Q96NG5 402 aa12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 TLE6Q9H808 572 aa12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 RNF216Q9NWF9 866 aaPredicted RBP12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 MIOSQ9NXC5 875 aa12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 SPG21Q9NZD8 308 aa12.23□□□□□ -0.45
EXOSC1-202ENST00000370885 CD207Q9UJ71 328 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms