RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 SPATA31C1P0DKV0 1188 aa7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 RNF187Q5TA31 235 aaPredicted RBP7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 KLHDC7AQ5VTJ3 777 aa7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 TTC19Q6DKK2 380 aaPredicted RBP7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 CAPN12Q6ZSI9 719 aa7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 TRIM50Q86XT4 487 aa7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 FAM76AQ8TAV0 307 aa7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 ETNPPLQ8TBG4 499 aa7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 PACSIN1Q9BY11 444 aa7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 AGO4Q9HCK5 861 aaKnown RBP7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 ABT1Q9ULW3 272 aaKnown RBP7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 CAPN6Q9Y6Q1 641 aa7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 SNED1Q8TER0 1413 aa7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 SOX5P35711 763 aa7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 ATP1A2P50993 1020 aa7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 VGLL4Q14135 290 aa7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 TTLL4Q14679 1199 aa7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 C2CD6Q53TS8 623 aa7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 MSANTD4Q8NCY6 345 aa7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 FBXL13Q8NEE6 735 aa7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 DDX47Q9H0S4 455 aaKnown RBP7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 APEX2Q9UBZ4 518 aa7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 PARP2Q9UGN5 583 aa7.69□□□□□ -1.18
TGFBR3-202ENST00000370399 PGRMC1O00264 195 aaKnown RBP7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 PON1P27169 355 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 DSG3P32926 999 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 NPTX2P47972 431 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 GALCP54803 685 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 VSNL1P62760 191 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 EMC2Q15006 297 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 TRIM65Q6PJ69 517 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 FASTKD5Q7L8L6 764 aaKnown RBP7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 TRIM59Q8IWR1 403 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 C11orf70Q9BRQ4 267 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 DNAI2Q9GZS0 605 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 ZMYND15Q9H091 742 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 PLCB1Q9NQ66 1216 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 NFU1Q9UMS0 254 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 SYNJ2BP-COX16A0A087WUM0 186 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 PSMD10O75832 226 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 MYZAPP0CAP1 466 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 CYP2C8P10632 490 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 EPHX2P34913 555 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 TCF7P36402 384 aaPredicted RBP7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 TRIP13Q15645 432 aaPredicted RBP7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 KRT71Q3SY84 523 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 ARSHQ5FYA8 562 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 CEP85LQ5SZL2 805 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 PCNX4Q63HM2 1172 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 FBXO16Q8IX29 292 aaPredicted RBP7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 ZNF710Q8N1W2 664 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 CLMNQ96JQ2 1002 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 FAM84AQ96KN4 292 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 DNAJC7Q99615 494 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 JPH2Q9BR39 696 aaPredicted RBP7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 MAK16Q9BXY0 300 aaKnown RBP7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 COX16Q9P0S2 106 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 CNOT8Q9UFF9 292 aaKnown RBP7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 ANAPC7Q9UJX3 599 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 CCL15-CCL14A0A0B4J2E2 113 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 IQCA1LA6NCM1 817 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 ATMINO43313 823 aaPredicted RBP7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 NPM3O75607 178 aaKnown RBP7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 HOXA7P31268 230 aaPredicted RBP7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 GBP2P32456 591 aaPredicted RBP7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 PLTPP55058 493 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 CASP8Q14790 479 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 CCL15Q16663 113 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 LY6KQ17RY6 165 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 SLFN12LQ6IEE8 588 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 GPC2Q8N158 579 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 GPD1LQ8N335 351 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 COG1Q8WTW3 980 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 ANKRD36BP1Q96IX9 119 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 HEMGNQ9BXL5 484 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 TOPORSQ9NS56 1045 aaPredicted RBP7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 ZNF541Q9H0D2 1346 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 NID2Q14112 1375 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 ITGB4P16144 1822 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 M0R2N6 131 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 FOXN3O00409 490 aaPredicted RBP7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 BPIFB4P59827 614 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 CC2D1AQ6P1N0 951 aaPredicted RBP7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 BTNL9Q6UXG8 535 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 CATSPER4Q7RTX7 472 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 ERO1BQ86YB8 467 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 SPATA4Q8NEY3 305 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 PPP1R13LQ8WUF5 828 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 SLC5A5Q92911 643 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 RPF1Q9H9Y2 349 aaKnown RBP7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 KCNK9Q9NPC2 374 aa7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 DNAJC17Q9NVM6 304 aaKnown RBP7.68□□□□□ -1.18
TGFBR3-202ENST00000370399 SSU72P8A0A1W2PR75 194 aa7.67□□□□□ -1.18
TGFBR3-202ENST00000370399 DYNC1LI2O43237 492 aaPredicted RBP7.67□□□□□ -1.18
TGFBR3-202ENST00000370399 CIITAP33076 1130 aa7.67□□□□□ -1.18
TGFBR3-202ENST00000370399 CTNNA1P35221 906 aaKnown RBP7.67□□□□□ -1.18
TGFBR3-202ENST00000370399 HERVK_113P62684 666 aa7.67□□□□□ -1.18
TGFBR3-202ENST00000370399 AFAP1L1Q8TED9 768 aa7.67□□□□□ -1.18
TGFBR3-202ENST00000370399 OPTNQ96CV9 577 aa7.67□□□□□ -1.18
TGFBR3-202ENST00000370399 LRRC1Q9BTT6 524 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms