RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 PCDHA12Q9UN75 941 aa18.03■□□□□ 0.48
VMA21-202ENST00000370361 CNTNAP2Q9UHC6 1331 aa18.02■□□□□ 0.48
VMA21-202ENST00000370361 FDPSP14324 419 aaKnown RBP18.02■□□□□ 0.48
VMA21-202ENST00000370361 AXLP30530 894 aa18.02■□□□□ 0.48
VMA21-202ENST00000370361 NEK4P51957 841 aa18.02■□□□□ 0.48
VMA21-202ENST00000370361 SPIRE1Q08AE8 756 aa18.02■□□□□ 0.48
VMA21-202ENST00000370361 NCBP1Q09161 790 aaKnown RBP18.02■□□□□ 0.48
VMA21-202ENST00000370361 KCNC3Q14003 757 aa18.02■□□□□ 0.48
VMA21-202ENST00000370361 CBX2Q14781 532 aaPredicted RBP18.02■□□□□ 0.48
VMA21-202ENST00000370361 EMC2Q15006 297 aa18.02■□□□□ 0.48
VMA21-202ENST00000370361 CALCRLQ16602 461 aa18.02■□□□□ 0.48
VMA21-202ENST00000370361 PLPP4Q5VZY2 271 aa18.02■□□□□ 0.48
VMA21-202ENST00000370361 NCAPH2Q6IBW4 605 aa18.02■□□□□ 0.48
VMA21-202ENST00000370361 TMC7Q7Z402 723 aa18.02■□□□□ 0.48
VMA21-202ENST00000370361 NSUN7Q8NE18 718 aaKnown RBP18.02■□□□□ 0.48
VMA21-202ENST00000370361 URGCPQ8TCY9 931 aa18.02■□□□□ 0.48
VMA21-202ENST00000370361 CASP10Q92851 521 aa18.02■□□□□ 0.48
VMA21-202ENST00000370361 CCDC51Q96ER9 411 aa18.02■□□□□ 0.48
VMA21-202ENST00000370361 MTRQ99707 1265 aa18.02■□□□□ 0.48
VMA21-202ENST00000370361 UBN1Q9NPG3 1134 aa18.02■□□□□ 0.48
VMA21-202ENST00000370361 ANKEF1Q9NU02 776 aa18.02■□□□□ 0.48
VMA21-202ENST00000370361 KANSL3Q9P2N6 904 aa18.02■□□□□ 0.48
VMA21-202ENST00000370361 BARX2Q9UMQ3 279 aaPredicted RBP18.02■□□□□ 0.48
VMA21-202ENST00000370361 USP15Q9Y4E8 981 aaPredicted RBP18.02■□□□□ 0.48
VMA21-202ENST00000370361 NEMFO60524 1076 aa18.01■□□□□ 0.47
VMA21-202ENST00000370361 FGFR4P22455 802 aa18.01■□□□□ 0.47
VMA21-202ENST00000370361 NPEPPSP55786 919 aa18.01■□□□□ 0.47
VMA21-202ENST00000370361 BCAR1P56945 870 aa18.01■□□□□ 0.47
VMA21-202ENST00000370361 LAMTOR4Q0VGL1 99 aa18.01■□□□□ 0.47
VMA21-202ENST00000370361 ORC2Q13416 577 aaPredicted RBP18.01■□□□□ 0.47
VMA21-202ENST00000370361 TFDP1Q14186 410 aa18.01■□□□□ 0.47
VMA21-202ENST00000370361 SAFBQ15424 915 aaKnown RBP eCLIP18.01■□□□□ 0.47
VMA21-202ENST00000370361 TPRNQ4KMQ1 711 aa18.01■□□□□ 0.47
VMA21-202ENST00000370361 XKR9Q5GH70 373 aa18.01■□□□□ 0.47
VMA21-202ENST00000370361 NOMO2Q5JPE7 1267 aa18.01■□□□□ 0.47
VMA21-202ENST00000370361 FERMT3Q86UX7 667 aa18.01■□□□□ 0.47
VMA21-202ENST00000370361 MRPL43Q8N983 215 aaKnown RBP18.01■□□□□ 0.47
VMA21-202ENST00000370361 PRPF31Q8WWY3 499 aaKnown RBP18.01■□□□□ 0.47
VMA21-202ENST00000370361 SUSD6Q92537 303 aa18.01■□□□□ 0.47
VMA21-202ENST00000370361 SH2D3AQ9BRG2 576 aa18.01■□□□□ 0.47
VMA21-202ENST00000370361 HCSTQ9UBK5 93 aa18.01■□□□□ 0.47
VMA21-202ENST00000370361 IRAK3Q9Y616 596 aa18.01■□□□□ 0.47
VMA21-202ENST00000370361 LOC730098B7Z3J9 87 aa18■□□□□ 0.47
VMA21-202ENST00000370361 DGAT1O75907 488 aa18■□□□□ 0.47
VMA21-202ENST00000370361 ERLIN2O94905 339 aa18■□□□□ 0.47
VMA21-202ENST00000370361 XRCC6P12956 609 aaKnown RBP eCLIP18■□□□□ 0.47
VMA21-202ENST00000370361 RNASELQ05823 741 aaKnown RBP18■□□□□ 0.47
VMA21-202ENST00000370361 NR5A1Q13285 461 aa18■□□□□ 0.47
VMA21-202ENST00000370361 ANKRD54Q6NXT1 300 aa18■□□□□ 0.47
VMA21-202ENST00000370361 DIS3L2Q8IYB7 885 aaKnown RBP18■□□□□ 0.47
VMA21-202ENST00000370361 CCDC43Q96MW1 224 aaKnown RBP18■□□□□ 0.47
VMA21-202ENST00000370361 NECTIN4Q96NY8 510 aa18■□□□□ 0.47
VMA21-202ENST00000370361 LLPHQ9BRT6 129 aaKnown RBP18■□□□□ 0.47
VMA21-202ENST00000370361 NFKBIZQ9BYH8 718 aa18■□□□□ 0.47
VMA21-202ENST00000370361 GJB4Q9NTQ9 266 aa18■□□□□ 0.47
VMA21-202ENST00000370361 PCDHB2Q9Y5E7 798 aa18■□□□□ 0.47
VMA21-202ENST00000370361 FAM86C2PA6NEL3 165 aa17.99■□□□□ 0.47
VMA21-202ENST00000370361 PER2O15055 1255 aa17.99■□□□□ 0.47
VMA21-202ENST00000370361 CSDE1O75534 798 aaKnown RBP17.99■□□□□ 0.47
VMA21-202ENST00000370361 SLITRK3O94933 977 aa17.99■□□□□ 0.47
VMA21-202ENST00000370361 ITIH3Q06033 890 aa17.99■□□□□ 0.47
VMA21-202ENST00000370361 MRPL10Q7Z7H8 261 aaKnown RBP17.99■□□□□ 0.47
VMA21-202ENST00000370361 DDX53Q86TM3 631 aaKnown RBP17.99■□□□□ 0.47
VMA21-202ENST00000370361 IFNLR1Q8IU57 520 aaPredicted RBP17.99■□□□□ 0.47
VMA21-202ENST00000370361 RNF135Q8IUD6 432 aa17.99■□□□□ 0.47
VMA21-202ENST00000370361 TPH2Q8IWU9 490 aa17.99■□□□□ 0.47
VMA21-202ENST00000370361 HACE1Q8IYU2 909 aa17.99■□□□□ 0.47
VMA21-202ENST00000370361 NECAB1Q8N987 351 aa17.99■□□□□ 0.47
VMA21-202ENST00000370361 RNF149Q8NC42 400 aa17.99■□□□□ 0.47
VMA21-202ENST00000370361 DYDC2Q96IM9 177 aa17.99■□□□□ 0.47
VMA21-202ENST00000370361 HSD17B14Q9BPX1 270 aa17.99■□□□□ 0.47
VMA21-202ENST00000370361 EIF2AK1Q9BQI3 630 aaKnown RBP17.99■□□□□ 0.47
VMA21-202ENST00000370361 TTC12Q9H892 705 aaPredicted RBP17.99■□□□□ 0.47
VMA21-202ENST00000370361 TBC1D13Q9NVG8 400 aa17.99■□□□□ 0.47
VMA21-202ENST00000370361 RGL1Q9NZL6 768 aa17.99■□□□□ 0.47
VMA21-202ENST00000370361 WRAP73Q9P2S5 460 aaPredicted RBP17.99■□□□□ 0.47
VMA21-202ENST00000370361 PCDHGC5Q9Y5F6 944 aa17.99■□□□□ 0.47
VMA21-202ENST00000370361 ARID2Q68CP9 1835 aa17.99■□□□□ 0.47
VMA21-202ENST00000370361 C2orf71A6NGG8 1288 aa17.98■□□□□ 0.47
VMA21-202ENST00000370361 BTBD18B2RXH4 712 aa17.98■□□□□ 0.47
VMA21-202ENST00000370361 ZC3H11AO75152 810 aaKnown RBP eCLIP17.98■□□□□ 0.47
VMA21-202ENST00000370361 OFD1O75665 1012 aa17.98■□□□□ 0.47
VMA21-202ENST00000370361 SRGAP2CP0DJJ0 459 aa17.98■□□□□ 0.47
VMA21-202ENST00000370361 TECP42680 631 aa17.98■□□□□ 0.47
VMA21-202ENST00000370361 EARS2Q5JPH6 523 aaKnown RBP17.98■□□□□ 0.47
VMA21-202ENST00000370361 NOTUMQ6P988 496 aa17.98■□□□□ 0.47
VMA21-202ENST00000370361 PPFIBP1Q86W92 1011 aa17.98■□□□□ 0.47
VMA21-202ENST00000370361 KSR1Q8IVT5 923 aa17.98■□□□□ 0.47
VMA21-202ENST00000370361 TMEM87AQ8NBN3 555 aa17.98■□□□□ 0.47
VMA21-202ENST00000370361 TMEM143Q96AN5 459 aa17.98■□□□□ 0.47
VMA21-202ENST00000370361 IGSF21Q96ID5 467 aa17.98■□□□□ 0.47
VMA21-202ENST00000370361 MFSD14AQ96MC6 490 aa17.98■□□□□ 0.47
VMA21-202ENST00000370361 TMEM175Q9BSA9 504 aa17.98■□□□□ 0.47
VMA21-202ENST00000370361 RSAD1Q9HA92 442 aa17.98■□□□□ 0.47
VMA21-202ENST00000370361 DZANK1Q9NVP4 752 aa17.98■□□□□ 0.47
VMA21-202ENST00000370361 LIMCH1Q9UPQ0 1083 aa17.98■□□□□ 0.47
VMA21-202ENST00000370361 ZMYM2Q9UBW7 1377 aa17.98■□□□□ 0.47
VMA21-202ENST00000370361 HIDE1A8MVS5 230 aa17.97■□□□□ 0.47
VMA21-202ENST00000370361 CTSAP10619 480 aa17.97■□□□□ 0.47
VMA21-202ENST00000370361 NCLP19338 710 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms