RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 EGFL8Q99944 293 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 LY9Q9HBG7 655 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 C2CD2LO14523 706 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 ASMTLO95671 621 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 APOEP02649 317 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 SERPIND1P05546 499 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 VEPH1Q14D04 833 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 TOGARAM2Q6ZUX3 1019 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 UNC13DQ70J99 1090 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 BZW1Q7L1Q6 419 aaKnown RBP9.12□□□□□ -0.95
ABCA4-201ENST00000370225 SP8Q8IXZ3 490 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 ZCWPW1Q9H0M4 648 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 DHX35Q9H5Z1 703 aaKnown RBP9.12□□□□□ -0.95
ABCA4-201ENST00000370225 GGA3Q9NZ52 723 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 TTI1O43156 1089 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 ZNF211Q13398 564 aaPredicted RBP9.12□□□□□ -0.95
ABCA4-201ENST00000370225 TAF1BQ53T94 588 aaPredicted RBP9.12□□□□□ -0.95
ABCA4-201ENST00000370225 RESP18Q5W5W9 173 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 ANKRD40Q6AI12 368 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 PPP1R2P3Q6NXS1 205 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 RMDN1Q96DB5 314 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 VPS11Q9H270 941 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 KLHL11Q9NVR0 708 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 SUFUQ9UMX1 484 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 NOVA2Q9UNW9 492 aaKnown RBP9.12□□□□□ -0.95
ABCA4-201ENST00000370225 AK9Q5TCS8 1911 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 PTCH1Q13635 1447 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 ZC3H4Q9UPT8 1303 aaKnown RBP9.12□□□□□ -0.95
ABCA4-201ENST00000370225 P4HBP07237 508 aaKnown RBP9.12□□□□□ -0.95
ABCA4-201ENST00000370225 TAC1P20366 129 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 CDC27P30260 824 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 SIRT2Q8IXJ6 389 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 SEPT5Q99719 369 aaPredicted RBP9.12□□□□□ -0.95
ABCA4-201ENST00000370225 ZMYND12Q9H0C1 365 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 YWHABP31946 246 aaKnown RBP9.12□□□□□ -0.95
ABCA4-201ENST00000370225 ZBED6P86452 979 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 FAM102AQ5T9C2 384 aaPredicted RBP9.12□□□□□ -0.95
ABCA4-201ENST00000370225 PPP4R3CPQ6ZMV5 832 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 CCDC197Q8NCU1 140 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 PIP4K2CQ8TBX8 421 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 JPH1Q9HDC5 661 aaPredicted RBP9.12□□□□□ -0.95
ABCA4-201ENST00000370225 TFRCP02786 760 aaKnown RBP9.12□□□□□ -0.95
ABCA4-201ENST00000370225 PRCPP42785 496 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 PDIK1LQ8N165 341 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 CCHCR1Q8TD31 782 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 FMO2Q99518 471 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 CPSF2Q9P2I0 782 aaKnown RBP9.12□□□□□ -0.95
ABCA4-201ENST00000370225 RARBP10826 455 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 PAPOLAP51003 745 aaKnown RBP9.11□□□□□ -0.95
ABCA4-201ENST00000370225 ARHGDIAP52565 204 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 ZNF507Q8TCN5 953 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 FAM84BQ96KN1 310 aaPredicted RBP9.11□□□□□ -0.95
ABCA4-201ENST00000370225 ACAP3Q96P50 834 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 C2orf40Q9H1Z8 148 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 IQANK1A0A1B0GTG1 560 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 POLRMTO00411 1230 aaKnown RBP9.11□□□□□ -0.95
ABCA4-201ENST00000370225 PSMD14O00487 310 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 CDC25BP30305 580 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 KCNH2Q12809 1159 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 GRM4Q14833 912 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 ANKRD20A4Q4UJ75 823 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 ANKRD20A8PQ5CZ79 823 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 ANKRD20A2Q5SQ80 823 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 ANKRD20A1Q5TYW2 823 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 TRIM42Q8IWZ5 723 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 TMEM35BQ8NCS4 154 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 WDR48Q8TAF3 677 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 RAPGEF5Q92565 580 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 PPP1R36Q96LQ0 422 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 CCDC138Q96M89 665 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 ZFYVE28Q9HCC9 887 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 RGL1Q9NZL6 768 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 ZNRF3Q9ULT6 936 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 ASB14A6NK59 587 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 CTNND1O60716 968 aaKnown RBP9.11□□□□□ -0.95
ABCA4-201ENST00000370225 RPSAP08865 295 aaKnown RBP9.11□□□□□ -0.95
ABCA4-201ENST00000370225 TRIM49P0CI25 452 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 TRIM49CP0CI26 452 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 SDC4P31431 198 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 EPHB4P54760 987 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 ARL6IP4Q66PJ3 421 aaKnown RBP9.11□□□□□ -0.95
ABCA4-201ENST00000370225 TJP2Q9UDY2 1190 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 NFU1Q9UMS0 254 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 TNS3Q68CZ2 1445 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 TMEM247A6NEH6 219 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 LRRC53A6NM62 1247 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 PDGFRBP09619 1106 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 SFNP31947 248 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 NUMBP49757 651 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 TOB2Q14106 344 aaPredicted RBP9.11□□□□□ -0.95
ABCA4-201ENST00000370225 GLE1Q53GS7 698 aaKnown RBP9.11□□□□□ -0.95
ABCA4-201ENST00000370225 PDCD7Q8N8D1 485 aaKnown RBP9.11□□□□□ -0.95
ABCA4-201ENST00000370225 PRRG1O14668 218 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 RASGRF2O14827 1237 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 IKBKBO14920 756 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 RALAP11233 206 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 ADRA2BP18089 450 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 SNAPC2Q13487 334 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 NECTIN1Q15223 517 aa9.11□□□□□ -0.95
ABCA4-201ENST00000370225 TBC1D16Q8TBP0 767 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms