RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 HOXA2O43364 376 aa22.83■■□□□ 1.25
SMNDC1-201ENST00000369592 ITGB1P05556 798 aa22.83■■□□□ 1.25
SMNDC1-201ENST00000369592 PCBP1Q15365 356 aaKnown RBP eCLIP22.83■■□□□ 1.25
SMNDC1-201ENST00000369592 AMHR2Q16671 573 aa22.83■■□□□ 1.25
SMNDC1-201ENST00000369592 PTPROQ16827 1216 aa22.83■■□□□ 1.25
SMNDC1-201ENST00000369592 UBXN11Q5T124 520 aa22.83■■□□□ 1.25
SMNDC1-201ENST00000369592 SPPL3Q8TCT6 385 aa22.83■■□□□ 1.25
SMNDC1-201ENST00000369592 TYW1Q9NV66 732 aaKnown RBP22.83■■□□□ 1.25
SMNDC1-201ENST00000369592 PIN4Q9Y237 131 aaKnown RBP22.83■■□□□ 1.25
SMNDC1-201ENST00000369592 STK24Q9Y6E0 443 aa22.83■■□□□ 1.25
SMNDC1-201ENST00000369592 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.82■■□□□ 1.24
SMNDC1-201ENST00000369592 USO1O60763 962 aaKnown RBP22.82■■□□□ 1.24
SMNDC1-201ENST00000369592 CYP11B2P19099 503 aa22.82■■□□□ 1.24
SMNDC1-201ENST00000369592 DNAJB1P25685 340 aa22.82■■□□□ 1.24
SMNDC1-201ENST00000369592 CCT6AP40227 531 aaKnown RBP22.82■■□□□ 1.24
SMNDC1-201ENST00000369592 MBTD1Q05BQ5 628 aa22.82■■□□□ 1.24
SMNDC1-201ENST00000369592 DTHD1Q6ZMT9 781 aa22.82■■□□□ 1.24
SMNDC1-201ENST00000369592 MRPL10Q7Z7H8 261 aaKnown RBP22.82■■□□□ 1.24
SMNDC1-201ENST00000369592 KLHL23Q8NBE8 558 aa22.82■■□□□ 1.24
SMNDC1-201ENST00000369592 MCPH1Q8NEM0 835 aa22.82■■□□□ 1.24
SMNDC1-201ENST00000369592 SNX21Q969T3 373 aa22.82■■□□□ 1.24
SMNDC1-201ENST00000369592 NECAB3Q96P71 396 aaPredicted RBP22.82■■□□□ 1.24
SMNDC1-201ENST00000369592 POLR3FQ9H1D9 316 aaPredicted RBP22.82■■□□□ 1.24
SMNDC1-201ENST00000369592 GPRC5CQ9NQ84 441 aa22.82■■□□□ 1.24
SMNDC1-201ENST00000369592 FAM105AQ9NUU6 356 aa22.82■■□□□ 1.24
SMNDC1-201ENST00000369592 COG5Q9UP83 839 aa22.82■■□□□ 1.24
SMNDC1-201ENST00000369592 PP2D1A8MPX8 630 aa22.81■■□□□ 1.24
SMNDC1-201ENST00000369592 IBSPP21815 317 aaPredicted RBP22.81■■□□□ 1.24
SMNDC1-201ENST00000369592 TIGD5Q53EQ6 642 aa22.81■■□□□ 1.24
SMNDC1-201ENST00000369592 HYIQ5T013 277 aa22.81■■□□□ 1.24
SMNDC1-201ENST00000369592 ARL6IP4Q66PJ3 421 aaKnown RBP22.81■■□□□ 1.24
SMNDC1-201ENST00000369592 PADI6Q6TGC4 694 aa22.81■■□□□ 1.24
SMNDC1-201ENST00000369592 BRAPQ7Z569 592 aa22.81■■□□□ 1.24
SMNDC1-201ENST00000369592 C1QTNF1Q9BXJ1 281 aa22.81■■□□□ 1.24
SMNDC1-201ENST00000369592 RAB34Q9BZG1 259 aa22.81■■□□□ 1.24
SMNDC1-201ENST00000369592 MEIS3P2A8K0S8 358 aa22.8■■□□□ 1.24
SMNDC1-201ENST00000369592 K7ELQ4 463 aaPredicted RBP22.8■■□□□ 1.24
SMNDC1-201ENST00000369592 TSPAN1O60635 241 aa22.8■■□□□ 1.24
SMNDC1-201ENST00000369592 SKIP12755 728 aa22.8■■□□□ 1.24
SMNDC1-201ENST00000369592 CDC25AP30304 524 aa22.8■■□□□ 1.24
SMNDC1-201ENST00000369592 RAB27AP51159 221 aa22.8■■□□□ 1.24
SMNDC1-201ENST00000369592 TFF2Q03403 129 aa22.8■■□□□ 1.24
SMNDC1-201ENST00000369592 TFDP1Q14186 410 aa22.8■■□□□ 1.24
SMNDC1-201ENST00000369592 CDCA2Q69YH5 1023 aaPredicted RBP22.8■■□□□ 1.24
SMNDC1-201ENST00000369592 TWF2Q6IBS0 349 aaKnown RBP22.8■■□□□ 1.24
SMNDC1-201ENST00000369592 COLGALT1Q8NBJ5 622 aa22.8■■□□□ 1.24
SMNDC1-201ENST00000369592 SNX29Q8TEQ0 813 aa22.8■■□□□ 1.24
SMNDC1-201ENST00000369592 RSPH1Q8WYR4 309 aa22.8■■□□□ 1.24
SMNDC1-201ENST00000369592 ALG13Q9NP73 1137 aaKnown RBP22.8■■□□□ 1.24
SMNDC1-201ENST00000369592 KIAA1024Q9UPX6 916 aa22.8■■□□□ 1.24
SMNDC1-201ENST00000369592 PDCP20941 246 aa22.79■■□□□ 1.24
SMNDC1-201ENST00000369592 AXLP30530 894 aa22.79■■□□□ 1.24
SMNDC1-201ENST00000369592 KCNK18Q7Z418 384 aa22.79■■□□□ 1.24
SMNDC1-201ENST00000369592 BSNDQ8WZ55 320 aa22.79■■□□□ 1.24
SMNDC1-201ENST00000369592 CCDC43Q96MW1 224 aaKnown RBP22.79■■□□□ 1.24
SMNDC1-201ENST00000369592 NSUN3Q9H649 340 aaKnown RBP22.79■■□□□ 1.24
SMNDC1-201ENST00000369592 DDX19AQ9NUU7 478 aaKnown RBP22.79■■□□□ 1.24
SMNDC1-201ENST00000369592 PCDHB2Q9Y5E7 798 aa22.79■■□□□ 1.24
SMNDC1-201ENST00000369592 BDP1A6H8Y1 2624 aa22.78■■□□□ 1.24
SMNDC1-201ENST00000369592 ARHGEF35A5YM69 484 aa22.78■■□□□ 1.24
SMNDC1-201ENST00000369592 EYA4O95677 639 aa22.78■■□□□ 1.24
SMNDC1-201ENST00000369592 BMP1P13497 986 aa22.78■■□□□ 1.24
SMNDC1-201ENST00000369592 SYT1P21579 422 aa22.78■■□□□ 1.24
SMNDC1-201ENST00000369592 TCEAL5Q5H9L2 206 aa22.78■■□□□ 1.24
SMNDC1-201ENST00000369592 KRT79Q5XKE5 535 aa22.78■■□□□ 1.24
SMNDC1-201ENST00000369592 AGMOQ6ZNB7 445 aa22.78■■□□□ 1.24
SMNDC1-201ENST00000369592 LRRC43Q8N309 656 aa22.78■■□□□ 1.24
SMNDC1-201ENST00000369592 HELQQ8TDG4 1101 aa22.78■■□□□ 1.24
SMNDC1-201ENST00000369592 HLA-CQ95604 372 aa22.78■■□□□ 1.24
SMNDC1-201ENST00000369592 PNMA5Q96PV4 448 aa22.78■■□□□ 1.24
SMNDC1-201ENST00000369592 BHMT2Q9H2M3 363 aa22.78■■□□□ 1.24
SMNDC1-201ENST00000369592 TCF20Q9UGU0 1960 aaKnown RBP22.78■■□□□ 1.24
SMNDC1-201ENST00000369592 OFD1O75665 1012 aa22.77■■□□□ 1.24
SMNDC1-201ENST00000369592 LAG3P18627 525 aa22.77■■□□□ 1.24
SMNDC1-201ENST00000369592 UBE3AQ05086 875 aa22.77■■□□□ 1.24
SMNDC1-201ENST00000369592 SKIV2LQ15477 1246 aaKnown RBP22.77■■□□□ 1.24
SMNDC1-201ENST00000369592 CSPP1Q1MSJ5 1256 aa22.77■■□□□ 1.24
SMNDC1-201ENST00000369592 PPP4R3CPQ6ZMV5 832 aa22.77■■□□□ 1.24
SMNDC1-201ENST00000369592 SMG8Q8ND04 991 aaKnown RBP22.77■■□□□ 1.24
SMNDC1-201ENST00000369592 LPPQ93052 612 aa22.77■■□□□ 1.24
SMNDC1-201ENST00000369592 CCDC51Q96ER9 411 aa22.77■■□□□ 1.24
SMNDC1-201ENST00000369592 FZD8Q9H461 694 aa22.77■■□□□ 1.24
SMNDC1-201ENST00000369592 AAASQ9NRG9 546 aa22.77■■□□□ 1.24
SMNDC1-201ENST00000369592 PCDHB12Q9Y5F1 795 aa22.77■■□□□ 1.24
SMNDC1-201ENST00000369592 E9PMD0 336 aa22.76■■□□□ 1.23
SMNDC1-201ENST00000369592 INO80B-WBP1J3KQ70 363 aa22.76■■□□□ 1.23
SMNDC1-201ENST00000369592 INPPL1O15357 1258 aa22.76■■□□□ 1.23
SMNDC1-201ENST00000369592 ARF4P18085 180 aaPredicted RBP22.76■■□□□ 1.23
SMNDC1-201ENST00000369592 NCLP19338 710 aaKnown RBP22.76■■□□□ 1.23
SMNDC1-201ENST00000369592 PLCB3Q01970 1234 aa22.76■■□□□ 1.23
SMNDC1-201ENST00000369592 RESTQ13127 1097 aa22.76■■□□□ 1.23
SMNDC1-201ENST00000369592 FAM187BQ17R55 369 aa22.76■■□□□ 1.23
SMNDC1-201ENST00000369592 CTC1Q2NKJ3 1217 aa22.76■■□□□ 1.23
SMNDC1-201ENST00000369592 MAEAQ7L5Y9 396 aa22.76■■□□□ 1.23
SMNDC1-201ENST00000369592 KCTD17Q8N5Z5 321 aa22.76■■□□□ 1.23
SMNDC1-201ENST00000369592 RNF169Q8NCN4 708 aa22.76■■□□□ 1.23
SMNDC1-201ENST00000369592 POF1BQ8WVV4 589 aa22.76■■□□□ 1.23
SMNDC1-201ENST00000369592 UBE2ZQ9H832 354 aaPredicted RBP22.76■■□□□ 1.23
SMNDC1-201ENST00000369592 HCN4Q9Y3Q4 1203 aa22.76■■□□□ 1.23
SMNDC1-201ENST00000369592 A0A1B0GUA9 196 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms