RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 RFC4P35249 363 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 PTGS2P35354 604 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 HSPA13P48723 471 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 HEATR4Q86WZ0 1026 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 PPP4R1Q8TF05 950 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 OTUD5Q96G74 571 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 C8orf37Q96NL8 207 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 CABP5Q9NP86 173 aa11.1□□□□□ -0.63
PRDM1-201ENST00000369089 POC1B-GALNT4F8VUJ3 575 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 IRS4O14654 1257 aaPredicted RBP11.09□□□□□ -0.63
PRDM1-201ENST00000369089 PEX14O75381 377 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 CHEK2O96017 543 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 PDE4DQ08499 809 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 PTPROQ16827 1216 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 CATSPER3Q86XQ3 398 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 MB21D1Q8N884 522 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 INPP5DQ92835 1189 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 DDX50Q9BQ39 737 aaKnown RBP11.09□□□□□ -0.63
PRDM1-201ENST00000369089 TRNAU1APQ9NX07 287 aaKnown RBP11.09□□□□□ -0.63
PRDM1-201ENST00000369089 DOLKQ9UPQ8 538 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 RASA4BC9J798 803 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 C6orf229H3BNL8 230 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 DAPK3O43293 454 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 RASA4O43374 803 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 NCK2O43639 380 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 KRT16P08779 473 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 LRPAP1P30533 357 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 ADCY8P40145 1251 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 NR1I3Q14994 352 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 RTN1Q16799 776 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 ANO7Q6IWH7 933 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 DIS3L2Q8IYB7 885 aaKnown RBP11.09□□□□□ -0.63
PRDM1-201ENST00000369089 GRK7Q8WTQ7 553 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 MAML1Q92585 1016 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 NSL1Q96IY1 281 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 TIPINQ9BVW5 301 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 BLZF1Q9H2G9 400 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 KRT82Q9NSB4 513 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 ACSL3O95573 720 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 DDX5P17844 614 aaKnown RBP11.09□□□□□ -0.63
PRDM1-201ENST00000369089 ERFP50548 548 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 NCALDP61601 193 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 NR1D2Q14995 579 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 RBM44Q6ZP01 1051 aaKnown RBP11.09□□□□□ -0.63
PRDM1-201ENST00000369089 CENPUQ71F23 418 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 USP44Q9H0E7 712 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 NMRK1Q9NWW6 199 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 DDX56Q9NY93 547 aaKnown RBP11.09□□□□□ -0.63
PRDM1-201ENST00000369089 ADAM22Q9P0K1 906 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 TRIM10Q9UDY6 481 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 RWDD2AQ9UIY3 292 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 DTNAQ9Y4J8 743 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 CLTCL1P53675 1640 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 CFAP99D6REC4 459 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 H2AFZP0C0S5 128 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 IDO1P14902 403 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 DRD4P21917 467 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 CDK7P50613 346 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 IST1P53990 364 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 RSBN1Q5VWQ0 802 aaPredicted RBP11.09□□□□□ -0.63
PRDM1-201ENST00000369089 CNNM4Q6P4Q7 775 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 H2AFVQ71UI9 128 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 CDH24Q86UP0 819 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 TSEN2Q8NCE0 465 aaKnown RBP11.09□□□□□ -0.63
PRDM1-201ENST00000369089 HDAC7Q8WUI4 952 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 STAMQ92783 540 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 CENPTQ96BT3 561 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 MCRS1Q96EZ8 462 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 FAM89AQ96GI7 184 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 TTC7AQ9ULT0 858 aaPredicted RBP11.09□□□□□ -0.63
PRDM1-201ENST00000369089 UNC13BO14795 1591 aa11.09□□□□□ -0.63
PRDM1-201ENST00000369089 PALMO75781 387 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 MAGEA10P43363 369 aaPredicted RBP11.08□□□□□ -0.64
PRDM1-201ENST00000369089 TIMM10P62072 90 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 HPCAP84074 193 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 MFSD6Q6ZSS7 791 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 COL23A1Q86Y22 540 aaPredicted RBP11.08□□□□□ -0.64
PRDM1-201ENST00000369089 ZNF444Q8N0Y2 327 aaPredicted RBP11.08□□□□□ -0.64
PRDM1-201ENST00000369089 SPIRE2Q8WWL2 714 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 NLRP3Q96P20 1036 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 KLHL4Q9C0H6 718 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 ARMCX3Q9UH62 379 aaPredicted RBP11.08□□□□□ -0.64
PRDM1-201ENST00000369089 TDRKHQ9Y2W6 561 aaKnown RBP11.08□□□□□ -0.64
PRDM1-201ENST00000369089 SNX24Q9Y343 169 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.08□□□□□ -0.64
PRDM1-201ENST00000369089 USP6P35125 1406 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 CDC42BPBQ9Y5S2 1711 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 PODXLO00592 558 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 TNFAIP8O95379 198 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 ATF2P15336 505 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 CCNJLQ8IV13 435 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 UNC5CLQ8IV45 518 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 OSCP1Q8WVF1 389 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 MAP4K1Q92918 833 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 BORCS5Q969J3 196 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 SETDB2Q96T68 719 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 ETNK2Q9NVF9 386 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 COQ6Q9Y2Z9 468 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 A8MXQ7 604 aa11.08□□□□□ -0.64
PRDM1-201ENST00000369089 H7C1W4 665 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms