RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 DCP1BQ8IZD4 617 aaKnown RBP11.53□□□□□ -0.56
PTPRK-205ENST00000368213 SHCBP1Q8NEM2 672 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 PPP1R12CQ9BZL4 782 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 HAUS4Q9H6D7 363 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 JMJD4Q9H9V9 463 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 PLCB1Q9NQ66 1216 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 KPNA6O60684 536 aa11.52□□□□□ -0.56
PTPRK-205ENST00000368213 MAP7Q14244 749 aa11.52□□□□□ -0.56
PTPRK-205ENST00000368213 NOTUMQ6P988 496 aa11.52□□□□□ -0.56
PTPRK-205ENST00000368213 FAM76AQ8TAV0 307 aa11.52□□□□□ -0.56
PTPRK-205ENST00000368213 GPRASP2Q96D09 838 aa11.52□□□□□ -0.56
PTPRK-205ENST00000368213 CARD6Q9BX69 1037 aa11.52□□□□□ -0.56
PTPRK-205ENST00000368213 ASNSD1Q9NWL6 643 aa11.52□□□□□ -0.56
PTPRK-205ENST00000368213 PVALEFA0A1B0GWK0 134 aa11.52□□□□□ -0.56
PTPRK-205ENST00000368213 CREB3O43889 395 aa11.52□□□□□ -0.56
PTPRK-205ENST00000368213 FKTNO75072 461 aa11.52□□□□□ -0.56
PTPRK-205ENST00000368213 ZBED1O96006 694 aa11.52□□□□□ -0.56
PTPRK-205ENST00000368213 CD4P01730 458 aa11.52□□□□□ -0.56
PTPRK-205ENST00000368213 RBP5P82980 135 aa11.52□□□□□ -0.56
PTPRK-205ENST00000368213 SDCCAG8Q86SQ7 713 aaPredicted RBP11.52□□□□□ -0.56
PTPRK-205ENST00000368213 RUNDC3BQ96NL0 473 aa11.52□□□□□ -0.56
PTPRK-205ENST00000368213 SDC4P31431 198 aa11.52□□□□□ -0.57
PTPRK-205ENST00000368213 NLRP11P59045 1033 aaKnown RBP11.52□□□□□ -0.57
PTPRK-205ENST00000368213 SNX1Q13596 522 aa11.52□□□□□ -0.57
PTPRK-205ENST00000368213 RGMBQ6NW40 437 aa11.52□□□□□ -0.57
PTPRK-205ENST00000368213 SNX9Q9Y5X1 595 aa11.52□□□□□ -0.57
PTPRK-205ENST00000368213 ZC3H4Q9UPT8 1303 aaKnown RBP11.52□□□□□ -0.57
PTPRK-205ENST00000368213 BASP1P80723 227 aaKnown RBP11.52□□□□□ -0.57
PTPRK-205ENST00000368213 SGO2Q562F6 1265 aa11.52□□□□□ -0.57
PTPRK-205ENST00000368213 ILDR1Q86SU0 546 aaPredicted RBP11.52□□□□□ -0.57
PTPRK-205ENST00000368213 ASIC4Q96FT7 647 aa11.52□□□□□ -0.57
PTPRK-205ENST00000368213 SH3BP1Q9Y3L3 701 aa11.52□□□□□ -0.57
PTPRK-205ENST00000368213 IL1R1P14778 569 aa11.52□□□□□ -0.57
PTPRK-205ENST00000368213 LLGL1Q15334 1064 aa11.52□□□□□ -0.57
PTPRK-205ENST00000368213 DPCR1Q3MIW9 517 aa11.52□□□□□ -0.57
PTPRK-205ENST00000368213 KRT39Q6A163 491 aa11.52□□□□□ -0.57
PTPRK-205ENST00000368213 DCLK2Q8N568 766 aa11.52□□□□□ -0.57
PTPRK-205ENST00000368213 STKLD1Q8NE28 680 aa11.52□□□□□ -0.57
PTPRK-205ENST00000368213 SPATC1LQ9H0A9 340 aa11.52□□□□□ -0.57
PTPRK-205ENST00000368213 SP110Q9HB58 689 aa11.52□□□□□ -0.57
PTPRK-205ENST00000368213 GPRC5DQ9NZD1 345 aa11.52□□□□□ -0.57
PTPRK-205ENST00000368213 DDX41Q9UJV9 622 aaKnown RBP11.52□□□□□ -0.57
PTPRK-205ENST00000368213 CA4P22748 312 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 RESP18Q5W5W9 173 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 PLA2G4FQ68DD2 849 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 NXNQ6DKJ4 435 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 TSC1Q92574 1164 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 ALKBH8Q96BT7 664 aaKnown RBP11.51□□□□□ -0.57
PTPRK-205ENST00000368213 SIK2Q9H0K1 926 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 VPS18Q9P253 973 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 MYPNQ86TC9 1320 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 PP2D1A8MPX8 630 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 KIAA0391O15091 583 aaKnown RBP11.51□□□□□ -0.57
PTPRK-205ENST00000368213 SERPING1P05155 500 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 CALB1P05937 261 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 TCP1P17987 556 aaKnown RBP11.51□□□□□ -0.57
PTPRK-205ENST00000368213 ADCY1Q08828 1119 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 TXNRD3Q86VQ6 643 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 MAGOHBQ96A72 148 aaKnown RBP11.51□□□□□ -0.57
PTPRK-205ENST00000368213 RPGRIP1Q96KN7 1286 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 XPNPEP3Q9NQH7 507 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 PRMT7Q9NVM4 692 aaPredicted RBP11.51□□□□□ -0.57
PTPRK-205ENST00000368213 PPP1R9AQ9ULJ8 1098 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 LCP1P13796 627 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 PPATQ06203 517 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 DCAF4L1Q3SXM0 396 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 CCDC121Q6ZUS5 278 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 SYT17Q9BSW7 474 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 KCNH7Q9NS40 1196 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 SLC4A7Q9Y6M7 1214 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 IQGAP1P46940 1657 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 DDTLA6NHG4 134 aaPredicted RBP11.51□□□□□ -0.57
PTPRK-205ENST00000368213 TMEM88BA6NKF7 163 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 BUB1BO60566 1050 aaPredicted RBP11.51□□□□□ -0.57
PTPRK-205ENST00000368213 CIB2O75838 187 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 NPTXRO95502 500 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 MYBP10242 640 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 CYP2C8P10632 490 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 ATF7IP2Q5U623 682 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 SLC7A5P2Q9GIP4 190 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 EPB41L4AQ9HCS5 686 aaPredicted RBP11.51□□□□□ -0.57
PTPRK-205ENST00000368213 USP32Q8NFA0 1604 aa11.51□□□□□ -0.57
PTPRK-205ENST00000368213 NKRFO15226 690 aaKnown RBP eCLIP11.5□□□□□ -0.579e-11■□□□□ 11.3
PTPRK-205ENST00000368213 ZWINTO95229 277 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 GNA15P30679 374 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 LMBRD2Q68DH5 695 aaPredicted RBP11.5□□□□□ -0.57
PTPRK-205ENST00000368213 PROM2Q8N271 834 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 TBX3O15119 743 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 IRF1P10914 325 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 ZNF445P59923 1031 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 CDK17Q00537 523 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 SP3Q02447 781 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 WDR72Q3MJ13 1102 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 EFHC2Q5JST6 749 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 SUDS3Q9H7L9 328 aaPredicted RBP11.5□□□□□ -0.57
PTPRK-205ENST00000368213 TUBE1Q9UJT0 475 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 PDS5AQ29RF7 1337 aaKnown RBP11.5□□□□□ -0.57
PTPRK-205ENST00000368213 ZNF609O15014 1411 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 SART1O43290 800 aaKnown RBP11.5□□□□□ -0.57
PTPRK-205ENST00000368213 STRNO43815 780 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms