RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 EPC1Q9H2F5 836 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 SIX2Q9NPC8 291 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 PCDHA10Q9Y5I2 948 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 TESPA1A2RU30 521 aaPredicted RBP15.26■□□□□ 0.03
USF1-202ENST00000368020 GRID2IPA4D2P6 1211 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 SEC31AO94979 1220 aaKnown RBP15.26■□□□□ 0.03
USF1-202ENST00000368020 ACTN1P12814 892 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 CYP2J2P51589 502 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 NCKAP1LP55160 1127 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 ARID5AQ03989 594 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 GNPTABQ3T906 1256 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 CFAP221Q4G0U5 840 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 GLE1Q53GS7 698 aaKnown RBP15.26■□□□□ 0.03
USF1-202ENST00000368020 TREML2Q5T2D2 321 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 UTP14CQ5TAP6 766 aaKnown RBP15.26■□□□□ 0.03
USF1-202ENST00000368020 SNRNP48Q6IEG0 339 aaKnown RBP15.26■□□□□ 0.03
USF1-202ENST00000368020 LBX2Q6XYB7 198 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 GADL1Q6ZQY3 521 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 USP37Q86T82 979 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 RASAL3Q86YV0 1011 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 CREG2Q8IUH2 290 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 REPS2Q8NFH8 660 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 KIFAP3Q92845 792 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 CAPZA3Q96KX2 299 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 MOV10L1Q9BXT6 1211 aaKnown RBP15.26■□□□□ 0.03
USF1-202ENST00000368020 ACAD9Q9H845 621 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 PKD2L1Q9P0L9 805 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 H0YCG3 227 aa15.25■□□□□ 0.03
USF1-202ENST00000368020 SRGAP2O75044 1071 aa15.25■□□□□ 0.03
USF1-202ENST00000368020 NR3C2P08235 984 aa15.25■□□□□ 0.03
USF1-202ENST00000368020 SLC10A3P09131 477 aa15.25■□□□□ 0.03
USF1-202ENST00000368020 SOX5P35711 763 aa15.25■□□□□ 0.03
USF1-202ENST00000368020 INHBEP58166 350 aa15.25■□□□□ 0.03
USF1-202ENST00000368020 ENPEPQ07075 957 aa15.25■□□□□ 0.03
USF1-202ENST00000368020 DMP1Q13316 513 aaPredicted RBP15.25■□□□□ 0.03
USF1-202ENST00000368020 BAATQ14032 418 aaPredicted RBP15.25■□□□□ 0.03
USF1-202ENST00000368020 GPAT2Q6NUI2 795 aa15.25■□□□□ 0.03
USF1-202ENST00000368020 XXYLT1Q8NBI6 393 aa15.25■□□□□ 0.03
USF1-202ENST00000368020 VIPAS39Q9H9C1 493 aa15.25■□□□□ 0.03
USF1-202ENST00000368020 APEX2Q9UBZ4 518 aa15.25■□□□□ 0.03
USF1-202ENST00000368020 NAGPAQ9UK23 515 aa15.25■□□□□ 0.03
USF1-202ENST00000368020 ABT1Q9ULW3 272 aaKnown RBP15.25■□□□□ 0.03
USF1-202ENST00000368020 L1RE1Q9UN81 338 aa15.25■□□□□ 0.03
USF1-202ENST00000368020 MANSC4A6NHS7 340 aaPredicted RBP15.24■□□□□ 0.03
USF1-202ENST00000368020 PSAPP07602 524 aa15.24■□□□□ 0.03
USF1-202ENST00000368020 PLA2G4AP47712 749 aa15.24■□□□□ 0.03
USF1-202ENST00000368020 APLP1P51693 650 aa15.24■□□□□ 0.03
USF1-202ENST00000368020 NPEPPSP55786 919 aa15.24■□□□□ 0.03
USF1-202ENST00000368020 MCCD1P59942 119 aaPredicted RBP15.24■□□□□ 0.03
USF1-202ENST00000368020 VSNL1P62760 191 aa15.24■□□□□ 0.03
USF1-202ENST00000368020 XKR9Q5GH70 373 aa15.24■□□□□ 0.03
USF1-202ENST00000368020 ALKBH5Q6P6C2 394 aaKnown RBP15.24■□□□□ 0.03
USF1-202ENST00000368020 ZNF571Q7Z3V5 609 aaPredicted RBP15.24■□□□□ 0.03
USF1-202ENST00000368020 HAUS6Q7Z4H7 955 aa15.24■□□□□ 0.03
USF1-202ENST00000368020 ANKRD23Q86SG2 305 aa15.24■□□□□ 0.03
USF1-202ENST00000368020 SYCE1Q8N0S2 351 aa15.24■□□□□ 0.03
USF1-202ENST00000368020 ZFP91Q96JP5 570 aaPredicted RBP15.24■□□□□ 0.03
USF1-202ENST00000368020 UBXN6Q9BZV1 441 aa15.24■□□□□ 0.03
USF1-202ENST00000368020 CREBZFQ9NS37 354 aa15.24■□□□□ 0.03
USF1-202ENST00000368020 ZNF214Q9UL59 606 aaPredicted RBP15.24■□□□□ 0.03
USF1-202ENST00000368020 MYH9P35579 1960 aaKnown RBP15.24■□□□□ 0.03
USF1-202ENST00000368020 CCL15-CCL14A0A0B4J2E2 113 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 SPDYE16A6NNV3 312 aaPredicted RBP15.23■□□□□ 0.03
USF1-202ENST00000368020 F8VZ95 297 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 KLRC1P26715 233 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 RTP1P59025 263 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 IRX3P78415 501 aaPredicted RBP15.23■□□□□ 0.03
USF1-202ENST00000368020 CCL15Q16663 113 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 MCPH1Q8NEM0 835 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 GTF3C2Q8WUA4 911 aaPredicted RBP15.23■□□□□ 0.03
USF1-202ENST00000368020 SPIRE2Q8WWL2 714 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 BRI3BPQ8WY22 251 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 TLR10Q9BXR5 811 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 INTS2Q9H0H0 1204 aaKnown RBP15.23■□□□□ 0.03
USF1-202ENST00000368020 ASCC2Q9H1I8 757 aaPredicted RBP15.23■□□□□ 0.03
USF1-202ENST00000368020 ABCB6Q9NP58 842 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 ZCCHC17Q9NP64 241 aaKnown RBP15.23■□□□□ 0.03
USF1-202ENST00000368020 PNMA3Q9UL41 463 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 BUB1O43683 1085 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 PALMO75781 387 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 H2AFZP0C0S5 128 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 OSBPP22059 807 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 VAMP7P51809 220 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 DMTNQ08495 405 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 SMC1AQ14683 1233 aaKnown RBP15.23■□□□□ 0.03
USF1-202ENST00000368020 MEI1Q5TIA1 1274 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 H2AFVQ71UI9 128 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 CHST13Q8NET6 341 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 SPATA4Q8NEY3 305 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 DNERQ8NFT8 737 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 TAF4BQ92750 862 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 POLD4Q9HCU8 107 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 SALL4Q9UJQ4 1053 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 NENFQ9UMX5 172 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 USP20Q9Y2K6 914 aa15.23■□□□□ 0.03
USF1-202ENST00000368020 FAM155AB1AL88 458 aaPredicted RBP15.22■□□□□ 0.03
USF1-202ENST00000368020 BACH1O14867 736 aa15.22■□□□□ 0.03
USF1-202ENST00000368020 SASH3O75995 380 aa15.22■□□□□ 0.03
USF1-202ENST00000368020 TFRCP02786 760 aaKnown RBP15.22■□□□□ 0.03
USF1-202ENST00000368020 APBA1Q02410 837 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms