RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 A8MXQ7 604 aa16.72■□□□□ 0.27
NUCKS1-201ENST00000367142 CTIFO43310 598 aaKnown RBP16.72■□□□□ 0.27
NUCKS1-201ENST00000367142 TRAPPC3O43617 180 aa16.72■□□□□ 0.27
NUCKS1-201ENST00000367142 NDUFA10O95299 355 aa16.72■□□□□ 0.27
NUCKS1-201ENST00000367142 NR3C1P04150 777 aa16.72■□□□□ 0.27
NUCKS1-201ENST00000367142 AP3M2P53677 418 aa16.72■□□□□ 0.27
NUCKS1-201ENST00000367142 GPC5P78333 572 aa16.72■□□□□ 0.27
NUCKS1-201ENST00000367142 AP1B1Q10567 949 aa16.72■□□□□ 0.27
NUCKS1-201ENST00000367142 PIGBQ92521 554 aa16.72■□□□□ 0.27
NUCKS1-201ENST00000367142 CEP72Q9P209 647 aa16.72■□□□□ 0.27
NUCKS1-201ENST00000367142 PLEKHG2Q9H7P9 1386 aa16.72■□□□□ 0.27
NUCKS1-201ENST00000367142 SYCE1LA8MT33 242 aa16.72■□□□□ 0.27
NUCKS1-201ENST00000367142 TNPO2O14787 897 aaKnown RBP16.72■□□□□ 0.27
NUCKS1-201ENST00000367142 ACSL3O95573 720 aa16.72■□□□□ 0.27
NUCKS1-201ENST00000367142 MORF4L2Q15014 288 aa16.72■□□□□ 0.27
NUCKS1-201ENST00000367142 SWSAP1Q6NVH7 229 aa16.72■□□□□ 0.27
NUCKS1-201ENST00000367142 KCNV1Q6PIU1 500 aa16.72■□□□□ 0.27
NUCKS1-201ENST00000367142 SFR1Q86XK3 245 aa16.72■□□□□ 0.27
NUCKS1-201ENST00000367142 FAM20AQ96MK3 541 aa16.72■□□□□ 0.27
NUCKS1-201ENST00000367142 IP6K2Q9UHH9 426 aa16.72■□□□□ 0.27
NUCKS1-201ENST00000367142 CCDC188H7C350 402 aa16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 SPAG7O75391 227 aa16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 ZRANB2O95218 330 aaKnown RBP eCLIP16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 P4HBP07237 508 aaKnown RBP16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 MYBL1P10243 752 aa16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 TMEM259Q4ZIN3 620 aa16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 RRM2BQ7LG56 351 aa16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 TRIML2Q8N7C3 387 aa16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 MORC4Q8TE76 937 aa16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 DNMT1P26358 1616 aaKnown RBP16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 MEI1Q5TIA1 1274 aa16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 TAGAPQ8N103 731 aa16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 PANX2Q96RD6 677 aa16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 SAMSN1Q9NSI8 373 aaKnown RBP16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 DDX56Q9NY93 547 aaKnown RBP16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 GABBR1Q9UBS5 961 aa16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 SEL1LQ9UBV2 794 aa16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 NR1H3Q13133 447 aa16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 RAD54LQ92698 747 aa16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 DOLKQ9UPQ8 538 aa16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 ASAP2O43150 1006 aa16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 POU5F1BQ06416 359 aa16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 SYTL3Q4VX76 610 aa16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 DNAJC17Q9NVM6 304 aaKnown RBP16.71■□□□□ 0.27
NUCKS1-201ENST00000367142 IGSF1Q8N6C5 1336 aa16.71■□□□□ 0.26
NUCKS1-201ENST00000367142 UBA6A0AVT1 1052 aaPredicted RBP16.71■□□□□ 0.26
NUCKS1-201ENST00000367142 KIF28PB7ZC32 967 aa16.71■□□□□ 0.26
NUCKS1-201ENST00000367142 YIPF2Q9BWQ6 316 aa16.71■□□□□ 0.26
NUCKS1-201ENST00000367142 PCDHGB4Q9UN71 923 aa16.71■□□□□ 0.26
NUCKS1-201ENST00000367142 GOLGA8MH3BSY2 632 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 PLEKHA8P1O95397 391 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 STAT3P40763 770 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 AARSP49588 968 aaKnown RBP eCLIP16.7■□□□□ 0.261e-7■■□□□ 13.9
NUCKS1-201ENST00000367142 PSMC1P62191 440 aaKnown RBP16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 NKX1-1Q15270 411 aaPredicted RBP16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 GRAMD1BQ3KR37 738 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 SPATA2LQ8IUW3 424 aaPredicted RBP16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 PGBD3Q8N328 593 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 FAM217BQ9NTX9 383 aaPredicted RBP16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 SNX5Q9Y5X3 404 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 EFCAB6Q5THR3 1501 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 ASMTLO95671 621 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 C11orf57Q6ZUT1 292 aaPredicted RBP16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 ABHD8Q96I13 439 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 TRPC7Q9HCX4 862 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 ZFXP17010 805 aaPredicted RBP16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 PROM2Q8N271 834 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 RMDN1Q96DB5 314 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 INTUQ9ULD6 942 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 KRT7P08729 469 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 GCLMP48507 274 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 VSTM4Q8IW00 320 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 STX19Q8N4C7 294 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 GNA15P30679 374 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 QARSP47897 775 aaKnown RBP16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 PSMC5P62195 406 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 ROR1Q01973 937 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 ANO4Q32M45 955 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 OR6J1Q8NGC5 347 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 TMEM60Q9H2L4 133 aa16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 PPARGC1AQ9UBK2 798 aaKnown RBP16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 ZC3H4Q9UPT8 1303 aaKnown RBP16.7■□□□□ 0.26
NUCKS1-201ENST00000367142 USP17L15C9J2P7 530 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 USP17L13C9JLJ4 530 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 USP17L11C9JVI0 530 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 USP17L18D6R9N7 530 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 USP17L22D6RA61 530 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 USP17L17D6RBQ6 530 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 USP17L19D6RCP7 530 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 USP17L20D6RJB6 530 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 HLA-DPA1P20036 260 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 USP17L24Q0WX57 530 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 EFTUD2Q15029 972 aaKnown RBP eCLIP16.69■□□□□ 0.262e-16■■■■□ 24.9
NUCKS1-201ENST00000367142 ACTR5Q9H9F9 607 aaPredicted RBP16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 DFFAO00273 331 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 ADRA2BP18089 450 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 GRIK1P39086 918 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 KIF12Q96FN5 646 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 C11orf70Q9BRQ4 267 aa16.69■□□□□ 0.26
NUCKS1-201ENST00000367142 ING2Q9H160 280 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms