RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 MAFGO15525 162 aa12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 PMS2P54278 862 aa12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 RCN2Q14257 317 aa12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 GPIHBP1Q8IV16 184 aa12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 MRPL4Q9BYD3 311 aaKnown RBP12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 APOBEC2Q9Y235 224 aaKnown RBP12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 AGTP01019 485 aa12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 CDK17Q00537 523 aa12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 PSPC1Q8WXF1 523 aaKnown RBP12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 KIFC3Q9BVG8 833 aa12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 DALRD3Q5D0E6 543 aaKnown RBP12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 TRAPPC11Q7Z392 1133 aa12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 CCNYQ8ND76 341 aa12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 TTC16Q8NEE8 873 aa12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 CDH16O75309 829 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 CSF1RP07333 972 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 PYGBP11216 843 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 UBE2SQ16763 222 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 HIBCHQ6NVY1 386 aaPredicted RBP12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 STAG2Q8N3U4 1231 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 SYT2Q8N9I0 419 aaPredicted RBP12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 PMLP29590 882 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 CCDC144BQ3MJ40 725 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 DAGLBQ8NCG7 672 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 MTRQ99707 1265 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 AP1M1Q9BXS5 423 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 CCDC22O60826 627 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 PAPOLAP51003 745 aaKnown RBP12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 DRAP1Q14919 205 aaPredicted RBP12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 NBPF20Q3BBV1 942 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 NDUFAF2Q8N183 169 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 KAT6AQ92794 2004 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 SMIM24O75264 130 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 MUTP22033 750 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 PEX3P56589 373 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 SLC7A5Q01650 507 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 CDR2Q01850 454 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 CIAPIN1Q6FI81 312 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 RNF139Q8WU17 664 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 LXNQ9BS40 222 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 CASZ1Q86V15 1759 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 ADGRF4Q8IZF3 695 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 NSUN4Q96CB9 384 aaKnown RBP12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 HEXIM2Q96MH2 286 aaKnown RBP12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 RFC1P35251 1148 aaPredicted RBP12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 ZNF335Q9H4Z2 1342 aaPredicted RBP12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 RGL2O15211 777 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 PRDX5P30044 214 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 HOMEZQ8IX15 550 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 ERGIC2Q96RQ1 377 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 PTPROQ16827 1216 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 ELMSAN1Q6PJG2 1045 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 CRAMP1Q96RY5 1269 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 BEGAINQ9BUH8 593 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 FMN2Q9NZ56 1722 aa12.82□□□□□ -0.36
CDC42BPA-203ENST00000366766 SPAG7O75391 227 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 GFPT1Q06210 699 aaPredicted RBP12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 ACAD11Q709F0 780 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 ANKRD7Q92527 254 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 NBPF3Q9H094 633 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 GYG2O15488 501 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 SNX1Q13596 522 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 DUOXA2Q1HG44 320 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 ZNF677Q86XU0 584 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 TSPYL2Q9H2G4 693 aaPredicted RBP12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 BBS9Q3SYG4 887 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 EIF2AQ9BY44 585 aaKnown RBP12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 FXR2P51116 673 aaKnown RBP eCLIP12.81□□□□□ -0.364e-7■■■■□ 23.4
CDC42BPA-203ENST00000366766 PIP4K2CQ8TBX8 421 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 GIPC2Q8TF65 315 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 MAML1Q92585 1016 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 FAF1Q9UNN5 650 aaPredicted RBP12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 LAMB3Q13751 1172 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 ICE2Q659A1 982 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 CAPN12Q6ZSI9 719 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 ZBTB9Q96C00 473 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 EPN3Q9H201 632 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 HOXA13P31271 388 aaPredicted RBP12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 MAGOHP61326 146 aaKnown RBP12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 AGBL2Q5U5Z8 902 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 RBM43Q6ZSC3 357 aaKnown RBP12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 PDZD8Q8NEN9 1154 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 PCIF1Q9H4Z3 704 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 DBNDD1Q9H9R9 158 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 NXF1Q9UBU9 619 aaKnown RBP12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 MTERF2Q49AM1 385 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 CDKL3Q8IVW4 592 aaPredicted RBP12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 POTEB3A0JP26 581 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 POTECB2RU33 542 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 DGAT1O75907 488 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 CCDC137Q6PK04 289 aaKnown RBP12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 POTEBQ6S5H4 581 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 C4orf22Q6V702 233 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 ATL2Q8NHH9 583 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 DDX27Q96GQ7 796 aaKnown RBP12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 SGSM3Q96HU1 749 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 C17orf75Q9HAS0 396 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 SAYSD1Q9NPB0 183 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 GOLGA8MH3BSY2 632 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 SDC4P31431 198 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms