RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 FGFR1P11362 822 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 PDIA4P13667 645 aaKnown RBP10.33□□□□□ -0.76
MRPL55-216ENST00000366744 POU3F3P20264 500 aaPredicted RBP10.33□□□□□ -0.76
MRPL55-216ENST00000366744 AXLP30530 894 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 BMPR1AP36894 532 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 TXLNAP40222 546 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 RNASELQ05823 741 aaKnown RBP10.33□□□□□ -0.76
MRPL55-216ENST00000366744 CAPSQ13938 189 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 DSC3Q14574 896 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 NAALADL2Q58DX5 795 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 NOTUMQ6P988 496 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 GLB1LQ6UWU2 654 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 MAEAQ7L5Y9 396 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 APBB1IPQ7Z5R6 666 aaPredicted RBP10.33□□□□□ -0.76
MRPL55-216ENST00000366744 SPRED2Q7Z698 418 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 RTN4RL1Q86UN2 441 aaPredicted RBP10.33□□□□□ -0.76
MRPL55-216ENST00000366744 ECHDC2Q86YB7 292 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 THNSL1Q8IYQ7 743 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 KCTD17Q8N5Z5 321 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 DEPTORQ8TB45 409 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 URGCPQ8TCY9 931 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 KIFAP3Q92845 792 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 CLP1Q92989 425 aaKnown RBP10.33□□□□□ -0.76
MRPL55-216ENST00000366744 P2RX5Q93086 422 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 SNX21Q969T3 373 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 CALML4Q96GE6 196 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 DRC1Q96MC2 740 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 LMAN2LQ9H0V9 348 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 BHMT2Q9H2M3 363 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 IFT122Q9HBG6 1241 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 XPNPEP1Q9NQW7 623 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 FOXD4L1Q9NU39 408 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 FAM105AQ9NUU6 356 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 PHLPP2Q6ZVD8 1323 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 CNTNAP2Q9UHC6 1331 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 SLC26A4O43511 780 aa10.32□□□□□ -0.76
MRPL55-216ENST00000366744 SSBP05455 408 aaKnown RBP eCLIP10.32□□□□□ -0.76
MRPL55-216ENST00000366744 SYT1P21579 422 aa10.32□□□□□ -0.76
MRPL55-216ENST00000366744 UBA7P41226 1012 aa10.32□□□□□ -0.76
MRPL55-216ENST00000366744 GATMP50440 423 aa10.32□□□□□ -0.76
MRPL55-216ENST00000366744 PTENP60484 403 aa10.32□□□□□ -0.76
MRPL55-216ENST00000366744 POU5F1BQ06416 359 aa10.32□□□□□ -0.76
MRPL55-216ENST00000366744 DMP1Q13316 513 aaPredicted RBP10.32□□□□□ -0.76
MRPL55-216ENST00000366744 CNNM3Q8NE01 707 aa10.32□□□□□ -0.76
MRPL55-216ENST00000366744 PRIMPOLQ96LW4 560 aa10.32□□□□□ -0.76
MRPL55-216ENST00000366744 ZNF558Q96NG5 402 aa10.32□□□□□ -0.76
MRPL55-216ENST00000366744 TRAIPQ9BWF2 469 aa10.32□□□□□ -0.76
MRPL55-216ENST00000366744 NFKBIZQ9BYH8 718 aa10.32□□□□□ -0.76
MRPL55-216ENST00000366744 ZSCAN16Q9H4T2 348 aaPredicted RBP10.32□□□□□ -0.76
MRPL55-216ENST00000366744 NSUN3Q9H649 340 aaKnown RBP10.32□□□□□ -0.76
MRPL55-216ENST00000366744 PRMT7Q9NVM4 692 aaPredicted RBP10.32□□□□□ -0.76
MRPL55-216ENST00000366744 COG5Q9UP83 839 aa10.32□□□□□ -0.76
MRPL55-216ENST00000366744 INPP5FQ9Y2H2 1132 aa10.32□□□□□ -0.76
MRPL55-216ENST00000366744 TRIP11Q15643 1979 aa10.32□□□□□ -0.76
MRPL55-216ENST00000366744 TCF20Q9UGU0 1960 aaKnown RBP10.32□□□□□ -0.76
MRPL55-216ENST00000366744 FSD2A1L4K1 749 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 STX6O43752 255 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 TSPAN1O60635 241 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 CSPG5O95196 566 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 EYA4O95677 639 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 SRGAP2BP0DMP2 458 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 LIG1P18858 919 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 CYP11B2P19099 503 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 GLRA2P23416 452 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 ARL2P36404 184 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 LONP1P36776 959 aaKnown RBP10.31□□□□□ -0.76
MRPL55-216ENST00000366744 NAMPTP43490 491 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 EFNA5P52803 228 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 UBE3AQ05086 875 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 MBTD1Q05BQ5 628 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 BMS1Q14692 1282 aaKnown RBP10.31□□□□□ -0.76
MRPL55-216ENST00000366744 SF3A1Q15459 793 aaKnown RBP10.31□□□□□ -0.76
MRPL55-216ENST00000366744 MAPK6Q16659 721 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 EP400NLQ6ZTU2 488 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 CABP7Q86V35 215 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 C4orf32Q8N8J7 132 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 HELQQ8TDG4 1101 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 ASAP3Q8TDY4 903 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 ATXN2LQ8WWM7 1075 aaKnown RBP10.31□□□□□ -0.76
MRPL55-216ENST00000366744 SYMPKQ92797 1274 aaKnown RBP10.31□□□□□ -0.76
MRPL55-216ENST00000366744 FAM193BQ96PV7 902 aaPredicted RBP10.31□□□□□ -0.76
MRPL55-216ENST00000366744 ADPGKQ9BRR6 497 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 TIPINQ9BVW5 301 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 UBN1Q9NPG3 1134 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 GPRC5CQ9NQ84 441 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 PUF60Q9UHX1 559 aaKnown RBP10.31□□□□□ -0.76
MRPL55-216ENST00000366744 PCDHB2Q9Y5E7 798 aa10.31□□□□□ -0.76
MRPL55-216ENST00000366744 PDCD11Q14690 1871 aaKnown RBP10.31□□□□□ -0.76
MRPL55-216ENST00000366744 A0A0C4DFX4 3053 aa10.3□□□□□ -0.76
MRPL55-216ENST00000366744 TTC28Q96AY4 2481 aa10.3□□□□□ -0.76
MRPL55-216ENST00000366744 A0A087WWV3 80 aa10.3□□□□□ -0.76
MRPL55-216ENST00000366744 PP2D1A8MPX8 630 aa10.3□□□□□ -0.76
MRPL55-216ENST00000366744 RBAK-RBAKDNI3L0D1 243 aa10.3□□□□□ -0.76
MRPL55-216ENST00000366744 NCK2O43639 380 aa10.3□□□□□ -0.76
MRPL55-216ENST00000366744 LPXNO60711 386 aa10.3□□□□□ -0.76
MRPL55-216ENST00000366744 ZC3H11AO75152 810 aaKnown RBP eCLIP10.3□□□□□ -0.76
MRPL55-216ENST00000366744 KRT18P05783 430 aaKnown RBP10.3□□□□□ -0.76
MRPL55-216ENST00000366744 ITGA4P13612 1032 aa10.3□□□□□ -0.76
MRPL55-216ENST00000366744 ALDH7A1P49419 539 aaKnown RBP10.3□□□□□ -0.76
MRPL55-216ENST00000366744 FAM189BP81408 668 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms