RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 PTPN21Q16825 1174 aa13.43□□□□□ -0.26
CAPN9-203ENST00000366666 BMT2Q1RMZ1 405 aa13.43□□□□□ -0.26
CAPN9-203ENST00000366666 BRDTQ58F21 947 aaPredicted RBP13.43□□□□□ -0.26
CAPN9-203ENST00000366666 CT47A1Q5JQC4 288 aaPredicted RBP13.43□□□□□ -0.26
CAPN9-203ENST00000366666 RHPN2Q8IUC4 686 aa13.43□□□□□ -0.26
CAPN9-203ENST00000366666 LINC01465Q8N7H1 131 aa13.43□□□□□ -0.26
CAPN9-203ENST00000366666 NTPCRQ9BSD7 190 aaKnown RBP13.43□□□□□ -0.26
CAPN9-203ENST00000366666 SRRTQ9BXP5 876 aaKnown RBP13.43□□□□□ -0.26
CAPN9-203ENST00000366666 HMX1Q9NP08 348 aaPredicted RBP13.43□□□□□ -0.26
CAPN9-203ENST00000366666 KMT5AQ9NQR1 393 aa13.43□□□□□ -0.26
CAPN9-203ENST00000366666 HDAC6Q9UBN7 1215 aa13.43□□□□□ -0.26
CAPN9-203ENST00000366666 GRIN2DO15399 1336 aa13.43□□□□□ -0.26
CAPN9-203ENST00000366666 LRRIQ4A6NIV6 560 aa13.42□□□□□ -0.26
CAPN9-203ENST00000366666 CLIC2O15247 247 aa13.42□□□□□ -0.26
CAPN9-203ENST00000366666 VTNP04004 478 aa13.42□□□□□ -0.26
CAPN9-203ENST00000366666 SRGAP2CP0DJJ0 459 aa13.42□□□□□ -0.26
CAPN9-203ENST00000366666 LAMTOR4Q0VGL1 99 aa13.42□□□□□ -0.26
CAPN9-203ENST00000366666 CDKAL1Q5VV42 579 aa13.42□□□□□ -0.26
CAPN9-203ENST00000366666 RUFY4Q6ZNE9 571 aa13.42□□□□□ -0.26
CAPN9-203ENST00000366666 CSGALNACT2Q8N6G5 542 aa13.42□□□□□ -0.26
CAPN9-203ENST00000366666 SUCLA2Q9P2R7 463 aaPredicted RBP13.42□□□□□ -0.26
CAPN9-203ENST00000366666 DENND3A2RUS2 1198 aa13.42□□□□□ -0.26
CAPN9-203ENST00000366666 SPDYE4A6NLX3 237 aa13.42□□□□□ -0.26
CAPN9-203ENST00000366666 KIF2AO00139 706 aaPredicted RBP13.42□□□□□ -0.26
CAPN9-203ENST00000366666 TREHO43280 583 aa13.42□□□□□ -0.26
CAPN9-203ENST00000366666 RTP1P59025 263 aa13.42□□□□□ -0.26
CAPN9-203ENST00000366666 ADAM17P78536 824 aa13.42□□□□□ -0.26
CAPN9-203ENST00000366666 GTF2BQ00403 316 aa13.42□□□□□ -0.26
CAPN9-203ENST00000366666 NBPF20Q3BBV1 942 aa13.42□□□□□ -0.26
CAPN9-203ENST00000366666 LRRC55Q6ZSA7 311 aa13.42□□□□□ -0.26
CAPN9-203ENST00000366666 SPC25Q9HBM1 224 aa13.42□□□□□ -0.26
CAPN9-203ENST00000366666 ARHGAP28Q9P2N2 729 aa13.42□□□□□ -0.26
CAPN9-203ENST00000366666 COL1A2P08123 1366 aa13.42□□□□□ -0.26
CAPN9-203ENST00000366666 TTLL13PA6NNM8 815 aa13.41□□□□□ -0.26
CAPN9-203ENST00000366666 EIF3DO15371 548 aaKnown RBP eCLIP13.41□□□□□ -0.26
CAPN9-203ENST00000366666 CSDE1O75534 798 aaKnown RBP13.41□□□□□ -0.26
CAPN9-203ENST00000366666 HSPA1AP0DMV8 641 aaKnown RBP13.41□□□□□ -0.26
CAPN9-203ENST00000366666 HSPA1BP0DMV9 641 aaKnown RBP13.41□□□□□ -0.26
CAPN9-203ENST00000366666 MAPTP10636 758 aaKnown RBP13.41□□□□□ -0.26
CAPN9-203ENST00000366666 GSDMDP57764 484 aa13.41□□□□□ -0.26
CAPN9-203ENST00000366666 TMEM62Q0P6H9 643 aa13.41□□□□□ -0.26
CAPN9-203ENST00000366666 PTPN14Q15678 1187 aa13.41□□□□□ -0.26
CAPN9-203ENST00000366666 SLC9C1Q4G0N8 1177 aa13.41□□□□□ -0.26
CAPN9-203ENST00000366666 IER5Q5VY09 327 aa13.41□□□□□ -0.26
CAPN9-203ENST00000366666 NFRKBQ6P4R8 1299 aa13.41□□□□□ -0.26
CAPN9-203ENST00000366666 NYAP1Q6ZVC0 841 aa13.41□□□□□ -0.26
CAPN9-203ENST00000366666 APTXQ7Z2E3 356 aaKnown RBP13.41□□□□□ -0.26
CAPN9-203ENST00000366666 CREBRFQ8IUR6 639 aa13.41□□□□□ -0.26
CAPN9-203ENST00000366666 ZSWIM2Q8NEG5 633 aa13.41□□□□□ -0.26
CAPN9-203ENST00000366666 SPIRE2Q8WWL2 714 aa13.41□□□□□ -0.26
CAPN9-203ENST00000366666 PSPC1Q8WXF1 523 aaKnown RBP13.41□□□□□ -0.26
CAPN9-203ENST00000366666 NLRP4Q96MN2 994 aa13.41□□□□□ -0.26
CAPN9-203ENST00000366666 MTG1Q9BT17 334 aaPredicted RBP13.41□□□□□ -0.26
CAPN9-203ENST00000366666 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.41□□□□□ -0.26
CAPN9-203ENST00000366666 NAMPTP43490 491 aa13.41□□□□□ -0.26
CAPN9-203ENST00000366666 KIAA0319LQ8IZA0 1049 aa13.41□□□□□ -0.26
CAPN9-203ENST00000366666 RNF149Q8NC42 400 aa13.41□□□□□ -0.26
CAPN9-203ENST00000366666 IFT74Q96LB3 600 aa13.41□□□□□ -0.26
CAPN9-203ENST00000366666 ST6GALNAC4Q9H4F1 302 aa13.41□□□□□ -0.26
CAPN9-203ENST00000366666 MINDY3Q9H8M7 445 aa13.41□□□□□ -0.26
CAPN9-203ENST00000366666 C17orf75Q9HAS0 396 aa13.41□□□□□ -0.26
CAPN9-203ENST00000366666 TBX20Q9UMR3 447 aa13.41□□□□□ -0.26
CAPN9-203ENST00000366666 PPME1Q9Y570 386 aa13.41□□□□□ -0.26
CAPN9-203ENST00000366666 PCDHB13Q9Y5F0 798 aa13.41□□□□□ -0.26
CAPN9-203ENST00000366666 NRCAMQ92823 1304 aa13.4□□□□□ -0.26
CAPN9-203ENST00000366666 BICDL2A1A5D9 508 aa13.4□□□□□ -0.26
CAPN9-203ENST00000366666 ANKRD63C9JTQ0 380 aa13.4□□□□□ -0.26
CAPN9-203ENST00000366666 IQCF3P0C7M6 154 aa13.4□□□□□ -0.26
CAPN9-203ENST00000366666 SKILP12757 684 aa13.4□□□□□ -0.26
CAPN9-203ENST00000366666 CST5P28325 142 aaPredicted RBP13.4□□□□□ -0.26
CAPN9-203ENST00000366666 PPP1R2P41236 205 aa13.4□□□□□ -0.26
CAPN9-203ENST00000366666 SMTNP53814 917 aa13.4□□□□□ -0.26
CAPN9-203ENST00000366666 FAM193AP78312 1265 aa13.4□□□□□ -0.26
CAPN9-203ENST00000366666 LRRC63Q05C16 580 aa13.4□□□□□ -0.26
CAPN9-203ENST00000366666 SLC39A4Q6P5W5 647 aa13.4□□□□□ -0.26
CAPN9-203ENST00000366666 FAM49AQ9H0Q0 323 aaPredicted RBP13.4□□□□□ -0.26
CAPN9-203ENST00000366666 IMPACTQ9P2X3 320 aa13.4□□□□□ -0.26
CAPN9-203ENST00000366666 MBLAC1A4D2B0 266 aaPredicted RBP13.39□□□□□ -0.27
CAPN9-203ENST00000366666 CDK11BP21127 795 aaKnown RBP13.39□□□□□ -0.27
CAPN9-203ENST00000366666 HOXC8P31273 242 aa13.39□□□□□ -0.27
CAPN9-203ENST00000366666 CASP4P49662 377 aa13.39□□□□□ -0.27
CAPN9-203ENST00000366666 ACLYP53396 1101 aa13.39□□□□□ -0.27
CAPN9-203ENST00000366666 FANCCQ00597 558 aa13.39□□□□□ -0.27
CAPN9-203ENST00000366666 GDF6Q6KF10 455 aaPredicted RBP13.39□□□□□ -0.27
CAPN9-203ENST00000366666 C7orf31Q8N865 590 aa13.39□□□□□ -0.27
CAPN9-203ENST00000366666 RETREG2Q8NC44 543 aa13.39□□□□□ -0.27
CAPN9-203ENST00000366666 TCP11Q8WWU5 503 aa13.39□□□□□ -0.27
CAPN9-203ENST00000366666 CTAGE1Q96RT6 745 aa13.39□□□□□ -0.27
CAPN9-203ENST00000366666 KATNAL1Q9BW62 490 aa13.39□□□□□ -0.27
CAPN9-203ENST00000366666 CDHR5Q9HBB8 845 aa13.39□□□□□ -0.27
CAPN9-203ENST00000366666 TYW1Q9NV66 732 aaKnown RBP13.39□□□□□ -0.27
CAPN9-203ENST00000366666 INTS13Q9NVM9 706 aa13.39□□□□□ -0.27
CAPN9-203ENST00000366666 IFNKQ9P0W0 207 aa13.39□□□□□ -0.27
CAPN9-203ENST00000366666 TRAF3IP3Q9Y228 551 aa13.39□□□□□ -0.27
CAPN9-203ENST00000366666 AKT3Q9Y243 479 aa13.39□□□□□ -0.27
CAPN9-203ENST00000366666 A0A087WZ62 844 aa13.39□□□□□ -0.27
CAPN9-203ENST00000366666 PDXKO00764 312 aa13.39□□□□□ -0.27
CAPN9-203ENST00000366666 MAGEB2O15479 319 aa13.39□□□□□ -0.27
CAPN9-203ENST00000366666 CCL5P13501 91 aa13.39□□□□□ -0.27
CAPN9-203ENST00000366666 NR2F2P24468 414 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms