RNA–Protein interactions for RNA: ENST00000358545.6

TNFSF11-202, Transcript of TNF superfamily member 11, humanhuman

TSL 1 (best) BASIC

Gene TNFSF11, Length 1,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-202ENST00000358545 PTPN21Q16825 1174 aa7.43□□□□□ -1.22
TNFSF11-202ENST00000358545 ZNF618Q5T7W0 954 aa7.43□□□□□ -1.22
TNFSF11-202ENST00000358545 ANKS3Q6ZW76 656 aa7.43□□□□□ -1.22
TNFSF11-202ENST00000358545 SLITRK4Q8IW52 837 aa7.43□□□□□ -1.22
TNFSF11-202ENST00000358545 STK11IPQ8N1F8 1099 aa7.43□□□□□ -1.22
TNFSF11-202ENST00000358545 LRRC47Q8N1G4 583 aaKnown RBP7.43□□□□□ -1.22
TNFSF11-202ENST00000358545 SMRP1Q8NCR6 262 aa7.43□□□□□ -1.22
TNFSF11-202ENST00000358545 DBF4BQ8NFT6 615 aa7.43□□□□□ -1.22
TNFSF11-202ENST00000358545 WNT8BQ93098 351 aa7.43□□□□□ -1.22
TNFSF11-202ENST00000358545 CHMP4CQ96CF2 233 aa7.43□□□□□ -1.22
TNFSF11-202ENST00000358545 EAF2Q96CJ1 260 aaPredicted RBP7.43□□□□□ -1.22
TNFSF11-202ENST00000358545 MSLNLQ96KJ4 702 aa7.43□□□□□ -1.22
TNFSF11-202ENST00000358545 RIPOR3Q96MK2 946 aa7.43□□□□□ -1.22
TNFSF11-202ENST00000358545 ATP8A2Q9NTI2 1148 aa7.43□□□□□ -1.22
TNFSF11-202ENST00000358545 NYAP2Q9P242 653 aa7.43□□□□□ -1.22
TNFSF11-202ENST00000358545 USP15Q9Y4E8 981 aaPredicted RBP7.43□□□□□ -1.22
TNFSF11-202ENST00000358545 SAMM50Q9Y512 469 aa7.43□□□□□ -1.22
TNFSF11-202ENST00000358545 ANKRD11Q6UB99 2663 aaPredicted RBP7.43□□□□□ -1.22
TNFSF11-202ENST00000358545 KAT6AQ92794 2004 aa7.43□□□□□ -1.22
TNFSF11-202ENST00000358545 FASNP49327 2511 aaKnown RBP7.43□□□□□ -1.22
TNFSF11-202ENST00000358545 TCRBV5S4A2TA0A5A2 114 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 TMEM232C9JQI7 657 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 KPNA6O60684 536 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 SURF6O75683 361 aaKnown RBP7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 ICAM3P32942 547 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 IKQ13123 557 aaPredicted RBP7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 ADAM15Q13444 863 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 TKFCQ3LXA3 575 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 ZNF468Q5VIY5 522 aaPredicted RBP7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 SESTD1Q86VW0 696 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 C11orf84Q9BUA3 381 aaPredicted RBP7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 PHF7Q9BWX1 381 aaPredicted RBP7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 LMAN2LQ9H0V9 348 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 CLEC1BQ9P126 229 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 CLIP2Q9UDT6 1046 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 GTF2IRD1Q9UHL9 959 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 BARX2Q9UMQ3 279 aaPredicted RBP7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 MYH6P13533 1939 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 LOXHD1Q8IVV2 1947 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 TTC3P53804 2025 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 K7ELQ4 463 aaPredicted RBP7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 NKRFO15226 690 aaKnown RBP eCLIP7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 SIN3BO75182 1162 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 F13A1P00488 732 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 BMP3P12645 472 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 CPB1P15086 417 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 BMP6P22004 513 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 SP100P23497 879 aaPredicted RBP7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 STAT2P52630 851 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 PCBP4P57723 403 aaKnown RBP7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 PDE4BQ07343 736 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 PCDH1Q08174 1060 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 SERINC3Q13530 473 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 TRIM71Q2Q1W2 868 aaKnown RBP7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 SEZ6Q53EL9 994 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 ZNF746Q6NUN9 644 aaPredicted RBP7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 BNC2Q6ZN30 1099 aaPredicted RBP7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 ADGRD2Q7Z7M1 963 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 FAM35AQ86V20 835 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 KIAA2013Q8IYS2 634 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 VWA5B2Q8N398 1253 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 FIBCD1Q8N539 461 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 KAT2BQ92831 832 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 TOP1MTQ969P6 601 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 PLD4Q96BZ4 506 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 MRFAP1L1Q96HT8 127 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 SRRTQ9BXP5 876 aaKnown RBP7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 IFIH1Q9BYX4 1025 aaKnown RBP7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 MIR1-1HGQ9H1L0 117 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 HDAC6Q9UBN7 1215 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 ADD3Q9UEY8 706 aaKnown RBP7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 PCDHB5Q9Y5E4 795 aa7.42□□□□□ -1.22
TNFSF11-202ENST00000358545 ZBED9Q6R2W3 1325 aa7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 EMSYQ7Z589 1322 aa7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 C5orf67F2Z3F1 127 aa7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 GOLIM4O00461 696 aa7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 C2CD2LO14523 706 aa7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 ARIH2O95376 493 aa7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 GLP2RO95838 553 aa7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 MMP1P03956 469 aa7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 MMP3P08254 477 aa7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 LINC00271P0C7V0 271 aa7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 TXNP10599 105 aaKnown RBP7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 NCLP19338 710 aaKnown RBP7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 NME2P22392 152 aa7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 COASYQ13057 564 aa7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 BAATQ14032 418 aaPredicted RBP7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 PUM1Q14671 1186 aaKnown RBP eCLIP7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 TTF1Q15361 905 aaPredicted RBP7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 ST3GAL2Q16842 350 aa7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 SLFN13Q68D06 897 aa7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 SDE2Q6IQ49 451 aa7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 CTR9Q6PD62 1173 aa7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 SCFD2Q8WU76 684 aa7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 AFG1LQ8WV93 481 aa7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 GATAD2BQ8WXI9 593 aa7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 ANAPC16Q96DE5 110 aa7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 CEP95Q96GE4 821 aa7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 ALG1Q9BT22 464 aa7.41□□□□□ -1.22
TNFSF11-202ENST00000358545 TRIM55Q9BYV6 548 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms