RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 ADAM33Q9BZ11 813 aa10.74□□□□□ -0.69
RNF40-202ENST00000357890 COA1Q9GZY4 146 aa10.74□□□□□ -0.69
RNF40-202ENST00000357890 EXOC3O60645 756 aa10.74□□□□□ -0.69
RNF40-202ENST00000357890 PECAM1P16284 738 aaPredicted RBP10.74□□□□□ -0.69
RNF40-202ENST00000357890 ADRA2BP18089 450 aa10.74□□□□□ -0.69
RNF40-202ENST00000357890 KRT15P19012 456 aa10.74□□□□□ -0.69
RNF40-202ENST00000357890 C6orf163Q5TEZ5 329 aa10.74□□□□□ -0.69
RNF40-202ENST00000357890 CCDC77Q9BR77 488 aa10.74□□□□□ -0.69
RNF40-202ENST00000357890 KDM4CQ9H3R0 1056 aa10.74□□□□□ -0.69
RNF40-202ENST00000357890 DOT1LQ8TEK3 1739 aa10.74□□□□□ -0.69
RNF40-202ENST00000357890 PPEF1O14829 653 aaPredicted RBP10.74□□□□□ -0.69
RNF40-202ENST00000357890 IL1R1P14778 569 aa10.74□□□□□ -0.69
RNF40-202ENST00000357890 PMS2P54278 862 aa10.74□□□□□ -0.69
RNF40-202ENST00000357890 TRIP13Q15645 432 aaPredicted RBP10.74□□□□□ -0.69
RNF40-202ENST00000357890 NBPF20Q3BBV1 942 aa10.74□□□□□ -0.69
RNF40-202ENST00000357890 WLSQ5T9L3 541 aa10.74□□□□□ -0.69
RNF40-202ENST00000357890 LRRC15Q8TF66 581 aa10.74□□□□□ -0.69
RNF40-202ENST00000357890 TATDN2Q93075 761 aa10.74□□□□□ -0.69
RNF40-202ENST00000357890 FAM163AQ96GL9 167 aaPredicted RBP10.74□□□□□ -0.69
RNF40-202ENST00000357890 CNOT8Q9UFF9 292 aaKnown RBP10.74□□□□□ -0.69
RNF40-202ENST00000357890 ZBTB21Q9ULJ3 1066 aa10.74□□□□□ -0.69
RNF40-202ENST00000357890 IRF6O14896 467 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 SPOPO43791 374 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 PPFIA2O75334 1257 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 CFBP00751 764 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 UCHL3P15374 230 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 TMED1Q13445 227 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 SLC27A3Q5K4L6 730 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 USP38Q8NB14 1042 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 NAP1L3Q99457 506 aaPredicted RBP10.73□□□□□ -0.69
RNF40-202ENST00000357890 ANO3Q9BYT9 981 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 USP15Q9Y4E8 981 aaPredicted RBP10.73□□□□□ -0.69
RNF40-202ENST00000357890 STK24Q9Y6E0 443 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 WDR91A4D1P6 747 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 SHBGP04278 402 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 SKIP12755 728 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 ATP4AP20648 1035 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 RHBDL3P58872 404 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 USP4Q13107 963 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 CERKLQ49MI3 558 aaPredicted RBP10.73□□□□□ -0.69
RNF40-202ENST00000357890 COBLL1Q53SF7 1204 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 EAPPQ56P03 285 aaPredicted RBP10.73□□□□□ -0.69
RNF40-202ENST00000357890 PPP4R3CPQ6ZMV5 832 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 C15orf52Q6ZUT6 534 aaKnown RBP10.73□□□□□ -0.69
RNF40-202ENST00000357890 LRRC8CQ8TDW0 803 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 PIGOQ8TEQ8 1089 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 PITPNM3Q9BZ71 974 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 ISCUQ9H1K1 167 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 METTL14Q9HCE5 456 aaKnown RBP10.73□□□□□ -0.69
RNF40-202ENST00000357890 GRID2IPA4D2P6 1211 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 UBTFL6P0CB48 400 aaPredicted RBP10.73□□□□□ -0.69
RNF40-202ENST00000357890 ITGA4P13612 1032 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 HOXA13P31271 388 aaPredicted RBP10.73□□□□□ -0.69
RNF40-202ENST00000357890 EIF3BP55884 814 aaKnown RBP10.73□□□□□ -0.69
RNF40-202ENST00000357890 UAP1Q16222 522 aaPredicted RBP10.73□□□□□ -0.69
RNF40-202ENST00000357890 GLYCTKQ8IVS8 523 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 SRRM1Q8IYB3 904 aaKnown RBP10.73□□□□□ -0.69
RNF40-202ENST00000357890 MIPOL1Q8TD10 442 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 BAP1Q92560 729 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 AMNQ9BXJ7 453 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 DOCK2Q92608 1830 aa10.73□□□□□ -0.69
RNF40-202ENST00000357890 FERP16591 822 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 RFC5P40937 340 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 CACNB3P54284 484 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 DEUP1Q05D60 604 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 ITIH3Q06033 890 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 KNOP1Q1ED39 458 aaKnown RBP10.72□□□□□ -0.69
RNF40-202ENST00000357890 SEL1L2Q5TEA6 688 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 LRIG3Q6UXM1 1119 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 GSTA5Q7RTV2 222 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 APBB1IPQ7Z5R6 666 aaPredicted RBP10.72□□□□□ -0.69
RNF40-202ENST00000357890 FAM186BQ8IYM0 893 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 RUBCNQ92622 972 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 GLG1Q92896 1179 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 RABGAP1Q9Y3P9 1069 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 C2CD2Q9Y426 696 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 ARAP2Q8WZ64 1704 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 DDX39AO00148 427 aaKnown RBP10.72□□□□□ -0.69
RNF40-202ENST00000357890 HNRNPH3P31942 346 aaKnown RBP10.72□□□□□ -0.69
RNF40-202ENST00000357890 COPS2P61201 443 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 UBXN2AP68543 259 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 IFI35P80217 286 aaPredicted RBP10.72□□□□□ -0.69
RNF40-202ENST00000357890 KCNMA1Q12791 1236 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 SLC29A2Q14542 456 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 HHATQ5VTY9 493 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 CYP4F22Q6NT55 531 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 LRRC55Q6ZSA7 311 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 SPATA21Q7Z572 469 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 FBXO11Q86XK2 927 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 TGS1Q96RS0 853 aaKnown RBP10.72□□□□□ -0.69
RNF40-202ENST00000357890 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.72□□□□□ -0.693e-7■■■□□ 15.8
RNF40-202ENST00000357890 FAM129AQ9BZQ8 928 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 TXLNGQ9NUQ3 528 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 THAP12O43422 761 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 FOSP01100 380 aaPredicted RBP10.72□□□□□ -0.69
RNF40-202ENST00000357890 PYGLP06737 847 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 ATP5DP30049 168 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 ICA1Q05084 483 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 LONRF1Q17RB8 773 aa10.72□□□□□ -0.69
RNF40-202ENST00000357890 QRICH1Q2TAL8 776 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms